Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS324F09f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 153 7e-38
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 153 7e-38
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 153 7e-38
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 153 7e-38
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 153 7e-38
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 153 7e-38
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 153 7e-38
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 153 7e-38
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 153 7e-38
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 147 5e-36
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 146 6e-36
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 88 4e-18
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 76 1e-14
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 57 9e-09
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 51 4e-07
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 47 9e-06
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.38
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.38
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.38
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 31 0.50
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 31 0.50
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 4.7
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 4.7
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 4.7
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 4.7
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 153 bits (371), Expect = 7e-38
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = -2
Query: 520 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 341
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 340 SGPSIVHRKCF 308
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 153 bits (371), Expect = 7e-38
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = -2
Query: 520 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 341
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 340 SGPSIVHRKCF 308
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 153 bits (371), Expect = 7e-38
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = -2
Query: 520 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 341
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 340 SGPSIVHRKCF 308
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 153 bits (371), Expect = 7e-38
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = -2
Query: 520 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 341
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 340 SGPSIVHRKCF 308
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 153 bits (371), Expect = 7e-38
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = -2
Query: 520 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 341
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 340 SGPSIVHRKCF 308
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 153 bits (371), Expect = 7e-38
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = -2
Query: 520 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 341
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 340 SGPSIVHRKCF 308
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 153 bits (371), Expect = 7e-38
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = -2
Query: 520 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 341
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 262 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 321
Query: 340 SGPSIVHRKCF 308
SGPSIVHRKCF
Sbjct: 322 SGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 153 bits (371), Expect = 7e-38
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = -2
Query: 520 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 341
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 292 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 351
Query: 340 SGPSIVHRKCF 308
SGPSIVHRKCF
Sbjct: 352 SGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 153 bits (371), Expect = 7e-38
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = -2
Query: 520 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 341
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 340 SGPSIVHRKCF 308
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 147 bits (356), Expect = 5e-36
Identities = 70/71 (98%), Positives = 70/71 (98%)
Frame = -2
Query: 520 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 341
MYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 364
Query: 340 SGPSIVHRKCF 308
SGPSIVHRKCF
Sbjct: 365 SGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 146 bits (355), Expect = 6e-36
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = -2
Query: 520 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 341
M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 305 MFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 364
Query: 340 SGPSIVHRKCF 308
SGPSIVHRKCF
Sbjct: 365 SGPSIVHRKCF 375
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 87.8 bits (208), Expect = 4e-18
Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Frame = -2
Query: 511 GIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQEYDE 341
G +R+ + P T+K+++ A P ERKY WIGGSIL SL TFQQMW+SK EYDE
Sbjct: 366 GFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMWVSKAEYDE 425
Query: 340 SGPSIVHRKC 311
SG SIV +KC
Sbjct: 426 SGKSIVEKKC 435
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 76.2 bits (179), Expect = 1e-14
Identities = 32/71 (45%), Positives = 49/71 (69%)
Frame = -2
Query: 520 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 341
++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++
Sbjct: 304 LFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYED 363
Query: 340 SGPSIVHRKCF 308
G S +H++ F
Sbjct: 364 MGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 56.8 bits (131), Expect = 9e-09
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 13/75 (17%)
Frame = -2
Query: 520 MYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL--ST 380
MYPG+ R++KE+ L A KI+I APP RK+ V++GG++LA+L
Sbjct: 309 MYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDR 368
Query: 379 FQQMWISKQEYDESG 335
Q W+SK+EY+E G
Sbjct: 369 DQDFWVSKKEYEEGG 383
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 51.2 bits (117), Expect = 4e-07
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = -2
Query: 475 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 326
L P + +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 365 LKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 46.8 bits (106), Expect = 9e-06
Identities = 19/57 (33%), Positives = 38/57 (66%)
Frame = -2
Query: 520 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 350
+ PGIA+++++E++ + P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 483 LMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.38
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 413 PYGVLPLWRSNDLNLHCRWGESCD 484
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.38
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 413 PYGVLPLWRSNDLNLHCRWGESCD 484
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.38
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 413 PYGVLPLWRSNDLNLHCRWGESCD 484
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 31.1 bits (67), Expect = 0.50
Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = -2
Query: 517 YPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEY 347
+PG +R+++E+ ++ P+ + + + P+ W G L + S WI+++++
Sbjct: 321 FPGFRERLEREVRSMLPAEYGLNVSNDVINPQTHS--WHCGQELLTASKVP--WINRKDW 376
Query: 346 DESGPSIVHRKCF*T 302
DE G S+ F T
Sbjct: 377 DERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 31.1 bits (67), Expect = 0.50
Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = -2
Query: 517 YPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEY 347
+PG +R+++E+ ++ P+ + + + P+ W G L + S WI+++++
Sbjct: 321 FPGFRERLEREVRSMLPAEYGLNVSNDVINPQTHS--WHCGQELLTASKVP--WINRKDW 376
Query: 346 DESGPSIVHRKCF*T 302
DE G S+ F T
Sbjct: 377 DERGDSLEFSNFFQT 391
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 249 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 341
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 352 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 251
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 249 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 341
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -2
Query: 433 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 272
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,414,075
Number of Sequences: 27780
Number of extensions: 200356
Number of successful extensions: 539
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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