Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324F08f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0449 - 14161812-14162902,14163121-14163153,14164248-141644...    28   4.0  
01_07_0111 - 41137822-41138973,41139453-41139540,41139850-411399...    28   5.2  

>05_03_0449 -
           14161812-14162902,14163121-14163153,14164248-14164457,
           14166348-14167011,14167129-14167287,14167449-14167563,
           14167672-14167867,14167965-14168286,14168695-14168865,
           14169486-14169495,14169932-14170285,14172429-14172553
          Length = 1149

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
 Frame = -1

Query: 194 SLDFLILL-NVHTAIKRPYDLA 132
           SLDFL+LL N H A+  PYD++
Sbjct: 555 SLDFLLLLRNSHFALNSPYDVS 576


>01_07_0111 -
           41137822-41138973,41139453-41139540,41139850-41139969,
           41140165-41140211,41140796-41141029,41141305-41141505,
           41141506-41143407,41144140-41145303,41145574-41145879
          Length = 1737

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -1

Query: 197 ESLDFLILLNVHTAIKRPYDLANALRQGALDSS 99
           ESL+ LIL + H   + P DL N  R   LD S
Sbjct: 755 ESLEHLILSDCHELEQLPEDLGNLYRLEVLDMS 787


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,726,943
Number of Sequences: 37544
Number of extensions: 171811
Number of successful extensions: 265
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)