Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324F08f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49814-1|CAA89968.1|  137|Anopheles gambiae serine proteinase pr...    23   6.2  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   6.2  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   8.2  

>Z49814-1|CAA89968.1|  137|Anopheles gambiae serine proteinase
           protein.
          Length = 137

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 427 DAEMCCTTMVTYRQTEPQRYKYAALCRGVRTL 332
           DA +C   + T R+  P+R +   LC    T+
Sbjct: 4   DASICAKRIPTNRRQMPERLRDDQLCARSETM 35


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +1

Query: 166 TFKSIKKSSDSDVALYKHGYFLTIYIIFFGHYLV 267
           T K     +D D   Y    FL   ++F G Y++
Sbjct: 705 TLKGTLTGADCDKPEYVSDVFLMSIVLFLGTYII 738


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = +2

Query: 296  NKICKKLQRLTSKRPNAATERCVLIA 373
            + +C+  +R+TSK      + C ++A
Sbjct: 1004 SNVCEAAKRITSKLQRCWDDECAILA 1029


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,684
Number of Sequences: 2352
Number of extensions: 8721
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)