Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS324F03f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 32 1.1
BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat co... 32 1.1
AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like f... 32 1.1
AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat co... 32 1.1
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 32 1.1
AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like f... 32 1.1
AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat co... 32 1.1
BC011851-1|AAH11851.1| 314|Homo sapiens chromosome 20 open read... 31 2.4
BC007957-1|AAH07957.1| 314|Homo sapiens chromosome 20 open read... 31 2.4
BC000643-1|AAH00643.1| 314|Homo sapiens chromosome 20 open read... 31 2.4
AL121891-8|CAD55940.1| 298|Homo sapiens chromosome 20 open read... 31 2.4
AL121891-7|CAD55939.1| 314|Homo sapiens chromosome 20 open read... 31 2.4
X52378-1|CAA36604.1| 349|Homo sapiens mature non-specific cross... 29 7.5
M33326-1|AAA59914.1| 349|Homo sapiens non-specific cross reacti... 29 7.5
D90064-1|BAA14108.1| 349|Homo sapiens NCA-W272 protein. 29 7.5
DQ822518-1|ABG46943.1| 349|Homo sapiens carcinoembryonic antige... 29 7.5
BC026263-1|AAH26263.1| 349|Homo sapiens carcinoembryonic antige... 29 7.5
AC004558-1|AAC13659.1| 349|Homo sapiens CGM6_HUMAN protein. 29 7.5
>BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 32.3 bits (70), Expect = 1.1
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 221 KPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG-DKGCTFEEIE 397
KP + +GE +K F+ GK RK+F P + DG KGC F + +
Sbjct: 84 KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143
>BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 464
Score = 32.3 bits (70), Expect = 1.1
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 221 KPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG-DKGCTFEEIE 397
KP + +GE +K F+ GK RK+F P + DG KGC F + +
Sbjct: 84 KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143
>AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 465
Score = 32.3 bits (70), Expect = 1.1
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 221 KPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG-DKGCTFEEIE 397
KP + +GE +K F+ GK RK+F P + DG KGC F + +
Sbjct: 84 KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143
>AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 415
Score = 32.3 bits (70), Expect = 1.1
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 221 KPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG-DKGCTFEEIE 397
KP + +GE +K F+ GK RK+F P + DG KGC F + +
Sbjct: 84 KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143
>AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 32.3 bits (70), Expect = 1.1
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 221 KPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG-DKGCTFEEIE 397
KP + +GE +K F+ GK RK+F P + DG KGC F + +
Sbjct: 84 KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143
>AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 462
Score = 32.3 bits (70), Expect = 1.1
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 221 KPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG-DKGCTFEEIE 397
KP + +GE +K F+ GK RK+F P + DG KGC F + +
Sbjct: 84 KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 143
>AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat
containing 4 variant protein.
Length = 441
Score = 32.3 bits (70), Expect = 1.1
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 221 KPNEPTKKGETKKSFLSNTGKAIQSTPSRKVFTPRAVNVGSLIYTDEDG-DKGCTFEEIE 397
KP + +GE +K F+ GK RK+F P + DG KGC F + +
Sbjct: 60 KPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQ 119
>BC011851-1|AAH11851.1| 314|Homo sapiens chromosome 20 open reading
frame 116 protein.
Length = 314
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 137 TRQAVKNVSRQPLHNIE--NMGKVVSTGPTKPNEPTKKGETKK 259
+R + ++PLHN E G+V GP +P EP G ++
Sbjct: 24 SRGRAASAGQEPLHNEELAGAGRVAQPGPLEPEEPRAGGRPRR 66
>BC007957-1|AAH07957.1| 314|Homo sapiens chromosome 20 open reading
frame 116 protein.
Length = 314
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 137 TRQAVKNVSRQPLHNIE--NMGKVVSTGPTKPNEPTKKGETKK 259
+R + ++PLHN E G+V GP +P EP G ++
Sbjct: 24 SRGRAASAGQEPLHNEELAGAGRVAQPGPLEPEEPRAGGRPRR 66
>BC000643-1|AAH00643.1| 314|Homo sapiens chromosome 20 open reading
frame 116 protein.
Length = 314
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 137 TRQAVKNVSRQPLHNIE--NMGKVVSTGPTKPNEPTKKGETKK 259
+R + ++PLHN E G+V GP +P EP G ++
Sbjct: 24 SRGRAASAGQEPLHNEELAGAGRVAQPGPLEPEEPRAGGRPRR 66
>AL121891-8|CAD55940.1| 298|Homo sapiens chromosome 20 open reading
frame 116 protein.
Length = 298
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 137 TRQAVKNVSRQPLHNIE--NMGKVVSTGPTKPNEPTKKGETKK 259
+R + ++PLHN E G+V GP +P EP G ++
Sbjct: 24 SRGRAASAGQEPLHNEELAGAGRVAQPGPLEPEEPRAGGRPRR 66
>AL121891-7|CAD55939.1| 314|Homo sapiens chromosome 20 open reading
frame 116 protein.
Length = 314
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 137 TRQAVKNVSRQPLHNIE--NMGKVVSTGPTKPNEPTKKGETKK 259
+R + ++PLHN E G+V GP +P EP G ++
Sbjct: 24 SRGRAASAGQEPLHNEELAGAGRVAQPGPLEPEEPRAGGRPRR 66
>X52378-1|CAA36604.1| 349|Homo sapiens mature non-specific cross
reacting antigen NCA-95 protein.
Length = 349
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 520 SPNYRWRGAWRGELLQVTRFRQWN 449
+P+ RWR W+G LL + F WN
Sbjct: 6 APSCRWRIPWQGLLLTASLFTFWN 29
>M33326-1|AAA59914.1| 349|Homo sapiens non-specific cross reacting
antigen protein.
Length = 349
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 520 SPNYRWRGAWRGELLQVTRFRQWN 449
+P+ RWR W+G LL + F WN
Sbjct: 6 APSCRWRIPWQGLLLTASLFTFWN 29
>D90064-1|BAA14108.1| 349|Homo sapiens NCA-W272 protein.
Length = 349
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 520 SPNYRWRGAWRGELLQVTRFRQWN 449
+P+ RWR W+G LL + F WN
Sbjct: 6 APSCRWRIPWQGLLLTASLFTFWN 29
>DQ822518-1|ABG46943.1| 349|Homo sapiens carcinoembryonic
antigen-related cell adhesion molecule 8 protein.
Length = 349
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 520 SPNYRWRGAWRGELLQVTRFRQWN 449
+P+ RWR W+G LL + F WN
Sbjct: 6 APSCRWRIPWQGLLLTASLFTFWN 29
>BC026263-1|AAH26263.1| 349|Homo sapiens carcinoembryonic
antigen-related cell adhesion molecule 8 protein.
Length = 349
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 520 SPNYRWRGAWRGELLQVTRFRQWN 449
+P+ RWR W+G LL + F WN
Sbjct: 6 APSCRWRIPWQGLLLTASLFTFWN 29
>AC004558-1|AAC13659.1| 349|Homo sapiens CGM6_HUMAN protein.
Length = 349
Score = 29.5 bits (63), Expect = 7.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 520 SPNYRWRGAWRGELLQVTRFRQWN 449
+P+ RWR W+G LL + F WN
Sbjct: 6 APSCRWRIPWQGLLLTASLFTFWN 29
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,621,048
Number of Sequences: 237096
Number of extensions: 1381448
Number of successful extensions: 2422
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2419
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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