Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324E03f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3800|AAN14054.2|  881|Drosophila melanogaster CG31439-P...    33   0.31 
AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA...    31   1.3  
AB190179-1|BAD44692.1|  841|Drosophila melanogaster transcriptio...    30   1.7  
AE014296-955|AAF50778.2| 1175|Drosophila melanogaster CG4835-PA ...    29   2.9  
BT022576-1|AAY54992.1|  657|Drosophila melanogaster IP11918p pro...    29   3.8  
BT022512-1|AAY54928.1|  420|Drosophila melanogaster IP11818p pro...    29   3.8  
AE014135-125|AAF59320.2|  628|Drosophila melanogaster CG11360-PA...    29   3.8  

>AE014297-3800|AAN14054.2|  881|Drosophila melanogaster CG31439-PA
           protein.
          Length = 881

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 29/133 (21%), Positives = 44/133 (33%)
 Frame = +3

Query: 51  TEPQSPTPNSKTIFTTASSLPITTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TAWST 230
           T P + T    T  TT ++   TT        +T T    ++  + T +  TT  T  +T
Sbjct: 565 TTPTTTTCTPTTTTTTTTTTTTTTTTTTTTTTTTCTPTTTTTTTTTTTTTTTTT-TTTTT 623

Query: 231 PTSSGCKAPRIXXXXXXXXXXXXXXPKTTLS*CTSATVLL*RCAMTATTMADLPTAMART 410
            T++ C                     TT + CT  T        T TT    PT    T
Sbjct: 624 TTTTTCTPTTTTTTTTTTTTTTTTTTTTTTTTCTPTTTTTTTTTTTTTTTTCTPTTTTTT 683

Query: 411 RRVQKSAGSSFLC 449
                +  ++  C
Sbjct: 684 TTTTTTTTTTTTC 696


>AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA
           protein.
          Length = 1976

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +3

Query: 48  PTEPQSPTPNSKTIFTTASSLPITTMPLKKANRSTRTRRAKSS 176
           P   + P P +    TT +  P +T P KK  + TRT    SS
Sbjct: 298 PPTQEEPVPATTESTTTTTQAPASTTPKKKKRKPTRTPGTGSS 340


>AB190179-1|BAD44692.1|  841|Drosophila melanogaster transcription
           factor dRFX2 protein.
          Length = 841

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
 Frame = +2

Query: 8   VQVILCLFVASLYANGTS--VSDSKLEDDLYNSILVADYDNAVEKSKQIYEDKKSEVI 175
           ++VI  +     +++G+S  +S+   +D  YN     D++N +E+S  I ++KK ++I
Sbjct: 666 IRVITAIRKVIFFSSGSSKLLSNFSNKDVFYNEWHSLDFENIIEESFLIPDEKKPQII 723


>AE014296-955|AAF50778.2| 1175|Drosophila melanogaster CG4835-PA
            protein.
          Length = 1175

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 31/120 (25%), Positives = 46/120 (38%), Gaps = 6/120 (5%)
 Frame = +3

Query: 69   TPNSKTIFTTASSLPITTMPLKKANRST------RTRRAKSSQMS*TNSYETTR*TAWST 230
            TP   T+ T ASS P+TT+       +T      +T   +S+ +S T +  TT  T  + 
Sbjct: 923  TPGLTTLSTEASSTPVTTVSTTPEATTTEMSTTPKTTTTESTTISTTTTDSTTPQTTTTE 982

Query: 231  PTSSGCKAPRIXXXXXXXXXXXXXXPKTTLS*CTSATVLL*RCAMTATTMADLPTAMART 410
             T+S                     PKTT +  T+        + TATT     T  + T
Sbjct: 983  STTSKTTTTESTIISTTPTTTEPTTPKTTTTESTTIPTTTTE-STTATTTPQTTTTESTT 1041


>BT022576-1|AAY54992.1|  657|Drosophila melanogaster IP11918p
           protein.
          Length = 657

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
 Frame = +2

Query: 77  LEDDLYNSILVADYDNAVEKSKQIYEDKKSEVITNVVN--KLIRNNKM-NCME 226
           L DDL + IL + Y N+V  S Q Y +   + + NV N  KL++ +   NC +
Sbjct: 364 LNDDLNSEILSSIYKNSV-PSTQEYANNSMKTVVNVSNSVKLVQGHHTGNCFQ 415


>BT022512-1|AAY54928.1|  420|Drosophila melanogaster IP11818p
           protein.
          Length = 420

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
 Frame = +2

Query: 77  LEDDLYNSILVADYDNAVEKSKQIYEDKKSEVITNVVN--KLIRNNKM-NCME 226
           L DDL + IL + Y N+V  S Q Y +   + + NV N  KL++ +   NC +
Sbjct: 127 LNDDLNSEILSSIYKNSV-PSTQEYANNSMKTVVNVSNSVKLVQGHHTGNCFQ 178


>AE014135-125|AAF59320.2|  628|Drosophila melanogaster CG11360-PA
           protein.
          Length = 628

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
 Frame = +2

Query: 77  LEDDLYNSILVADYDNAVEKSKQIYEDKKSEVITNVVN--KLIRNNKM-NCME 226
           L DDL + IL + Y N+V  S Q Y +   + + NV N  KL++ +   NC +
Sbjct: 335 LNDDLNSEILSSIYKNSV-PSTQEYANNSMKTVVNVSNSVKLVQGHHTGNCFQ 386


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,155,043
Number of Sequences: 53049
Number of extensions: 350695
Number of successful extensions: 1819
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1818
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)