Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS324E03f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81507-1|CAB04133.1| 485|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical pr... 31 0.50
AF036698-2|AAB88353.1| 485|Caenorhabditis elegans Puf (pumilio/... 31 0.50
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z70682-6|CAH60781.2| 401|Caenorhabditis elegans Hypothetical pr... 30 0.87
U22831-4|AAK20066.1| 633|Caenorhabditis elegans Hypothetical pr... 30 0.87
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical p... 29 2.7
Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical p... 29 2.7
Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical pr... 29 2.7
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 29 2.7
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 29 2.7
U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z81479-8|CAB03946.1| 1181|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z81046-4|CAB02825.1| 278|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 28 4.7
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 28 4.7
Z70311-3|CAA94372.1| 546|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z49967-10|CAA90254.1| 553|Caenorhabditis elegans Hypothetical p... 27 8.1
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 27 8.1
U42848-3|AAA83609.1| 693|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z81507-1|CAB04133.1| 485|Caenorhabditis elegans Hypothetical
protein F18A11.1 protein.
Length = 485
Score = 31.1 bits (67), Expect = 0.50
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 146 IYEDKKS-EVITNVVNKLIRNNKMNCMEYAYQLWMQGSKDIVRECFPVEFTLIFAENNIK 322
+ +DK ++ V+++L N K+ C ++ QL IVR C+ + + FA I+
Sbjct: 248 VCQDKYGCRLVQQVIDRLAENPKLPCFKFRIQLLHSLMTCIVRNCYRLS-SNEFANYVIQ 306
Query: 323 LMYKRDGLALTLRD 364
+ K G+ RD
Sbjct: 307 YVIKSSGIMEMYRD 320
>Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical
protein F58A4.1 protein.
Length = 254
Score = 31.1 bits (67), Expect = 0.50
Identities = 24/65 (36%), Positives = 29/65 (44%)
Frame = +3
Query: 48 PTEPQSPTPNSKTIFTTASSLPITTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TAWS 227
P P + T T SS +T + ST T R+ S+ T S TT TA S
Sbjct: 77 PERLTKPYEETDTPIPTHSSPSTSTSTSTSTSTSTSTSRSTSTVTPTTRSSTTT--TATS 134
Query: 228 TPTSS 242
TPTSS
Sbjct: 135 TPTSS 139
>AF036698-2|AAB88353.1| 485|Caenorhabditis elegans Puf
(pumilio/fbf) domain-containingprotein 7 protein.
Length = 485
Score = 31.1 bits (67), Expect = 0.50
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 146 IYEDKKS-EVITNVVNKLIRNNKMNCMEYAYQLWMQGSKDIVRECFPVEFTLIFAENNIK 322
+ +DK ++ V+++L N K+ C ++ QL IVR C+ + + FA I+
Sbjct: 248 VCQDKYGCRLVQQVIDRLAENPKLPCFKFRIQLLHSLMTCIVRNCYRLS-SNEFANYVIQ 306
Query: 323 LMYKRDGLALTLRD 364
+ K G+ RD
Sbjct: 307 YVIKSSGIMEMYRD 320
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 30.7 bits (66), Expect = 0.66
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +3
Query: 51 TEPQSPTPNSKTIF--TTASSLPITTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TAW 224
T +PT ++T TT ++ P TT P +T T AK+++ + T + +TT+ T+
Sbjct: 254 TTTTTPTTTTQTTTKPTTTTTTPTTT-PTTTTTPTTTTTTAKTTKST-TTTTKTTKTTST 311
Query: 225 STPTSSGCKAP 257
T T++ K P
Sbjct: 312 PTTTTTTPKTP 322
>Z70682-6|CAH60781.2| 401|Caenorhabditis elegans Hypothetical
protein F08G5.7 protein.
Length = 401
Score = 30.3 bits (65), Expect = 0.87
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +3
Query: 12 KLFCVFSWRLYMPTEPQSPTPN-SKTIFTTASSLPITTMPLKKANRSTRTRRAKSSQMS* 188
++ C + R T +PT + TI T+ +++ TT+ KA +T+T + ++
Sbjct: 195 QIICKYCPRETTSTTTVTPTTTKAATIKTSTTTVTPTTVTTTKAPTTTKTSTSTTTPKFT 254
Query: 189 TNSYETTR*TAWSTPTSSGCKAP 257
T + +TT+ ++PTS+ P
Sbjct: 255 TTTIQTTK-KITTSPTSTTASIP 276
>U22831-4|AAK20066.1| 633|Caenorhabditis elegans Hypothetical
protein F47D12.5 protein.
Length = 633
Score = 30.3 bits (65), Expect = 0.87
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +2
Query: 254 SKDIVRECFPVEFTLIFAENNIKLMYKRDGLALTLRDDSNNDGRLAYGDGKDKTSPKVSW 433
+ ++RECFP +I + +Y ++G+ + DS DG L + K+S +
Sbjct: 543 ANSLIRECFPEISNVIKIPVSDSKIYVKNGILKKILKDSREDGSLLWALLVIKSSMEQDK 602
Query: 434 KFVPL 448
FV L
Sbjct: 603 SFVNL 607
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +2
Query: 32 VASLYANGTSVSDSKLEDDLYNSILVADYDNAVE---KSKQIYEDKKSEV 172
+ L N + + S E D Y ADYD +E + ++ Y DKKSE+
Sbjct: 250 IRQLETNKSEIVSSYHELDCYQETPEADYDTFIELVNQKRREYADKKSEM 299
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 48 PTEPQSPTPNSKTIFTTASSLPITT---MPLKKANRSTRTRRAKSSQMS*TNSYETTR 212
PT Q+ TP + TI TT +P TT PL+K N + A S M N T +
Sbjct: 94 PTSTQTTTPTTTTITTT--PVPTTTPYLSPLEKFNEAMNNDGAFKSLMDVINFNSTAK 149
>Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical
protein D1054.9e protein.
Length = 481
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +3
Query: 45 MPTEPQSPTPNSKTIFTTASSLPI----TTMPLKKANRSTRTRRAKSSQMS*TNSYETT 209
+PTEP + +S T +T LPI + +A+ ST T A+ S + T + TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTT 293
>Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical
protein D1054.9d protein.
Length = 477
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +3
Query: 45 MPTEPQSPTPNSKTIFTTASSLPI----TTMPLKKANRSTRTRRAKSSQMS*TNSYETT 209
+PTEP + +S T +T LPI + +A+ ST T A+ S + T + TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTT 293
>Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical
protein D1054.9b protein.
Length = 559
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +3
Query: 45 MPTEPQSPTPNSKTIFTTASSLPI----TTMPLKKANRSTRTRRAKSSQMS*TNSYETT 209
+PTEP + +S T +T LPI + +A+ ST T A+ S + T + TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTT 293
>Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical
protein D1054.9a protein.
Length = 508
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +3
Query: 45 MPTEPQSPTPNSKTIFTTASSLPI----TTMPLKKANRSTRTRRAKSSQMS*TNSYETT 209
+PTEP + +S T +T LPI + +A+ ST T A+ S + T + TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTT 293
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -2
Query: 466 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVVAVIAQRQSKTV 338
+L++LP LP++ TR+ GK +V+A S T+
Sbjct: 781 ELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTI 823
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -2
Query: 466 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVVAVIAQRQSKTV 338
+L++LP LP++ TR+ GK +V+A S T+
Sbjct: 781 ELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTI 823
>U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical
protein T10H10.3 protein.
Length = 389
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +2
Query: 41 LYANGTSVSDSKLEDDLYNSILVADYDNAVEK--SKQIYE-DKKSEVITNVVNKLIRNNK 211
+YA S D LE DL+N + +Y++ + K +++++ KK E NV+N+ I
Sbjct: 318 MYAQSDSSLDHLLEWDLFNFEQLTEYEHLMMKLYKQEVFDIVKKYEKKRNVLNREIHRRD 377
Query: 212 MN 217
++
Sbjct: 378 VS 379
>Z81479-8|CAB03946.1| 1181|Caenorhabditis elegans Hypothetical protein
C34F6.9 protein.
Length = 1181
Score = 27.9 bits (59), Expect = 4.7
Identities = 23/83 (27%), Positives = 35/83 (42%)
Frame = +2
Query: 20 LCLFVASLYANGTSVSDSKLEDDLYNSILVADYDNAVEKSKQIYEDKKSEVITNVVNKLI 199
LC F+A NG + E D N +YD+A K + + K S IT +V +
Sbjct: 1093 LCSFIAHCGKNGDNGHYKSFEVDRTNEFQYNEYDDA----KVVLDSKLSSDIT-IVLAMF 1147
Query: 200 RNNKMNCMEYAYQLWMQGSKDIV 268
R + + A + G +IV
Sbjct: 1148 RKQEAVAKDAATDIIFDGRGNIV 1170
>Z81046-4|CAB02825.1| 278|Caenorhabditis elegans Hypothetical
protein C37E2.5 protein.
Length = 278
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 48 PTEPQSPTPNSKTIFTTASSLPITTMPLKKAN 143
PT + TP+S + T SSLP T+ L N
Sbjct: 206 PTADNASTPSSSSSITATSSLPTTSSSLSVYN 237
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 57 PQSPTPNSKTIFTTAS-SLPITTMPLKKANRSTRTR 161
PQ P P +T T +LP TT+P+ N++ RT+
Sbjct: 762 PQVPLPVVQTTQTAPKPTLPPTTLPVLTTNKTPRTK 797
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +2
Query: 119 DNAVEKSKQIYEDKKSEVITNVVNKLIRNNKMNCME 226
+NA E SKQ+Y D K+ +++N ++ + + M ++
Sbjct: 51 ENAQEFSKQLYHDLKNSILSNADDERLYKDIMTYLQ 86
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +2
Query: 119 DNAVEKSKQIYEDKKSEVITNVVNKLIRNNKMNCME 226
+NA E SKQ+Y D K+ +++N ++ + + M ++
Sbjct: 51 ENAQEFSKQLYHDLKNSILSNADDERLYKDIMTYLQ 86
>Z70311-3|CAA94372.1| 546|Caenorhabditis elegans Hypothetical
protein T25B9.4 protein.
Length = 546
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +3
Query: 66 PTPNSKTIFTTASSLPITTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TAWSTPTSSG 245
P P + T+ S PIT K +R + +R K ++ TT T S P + G
Sbjct: 434 PPPETATVALPNSLPPITVSARSKNSRKSTLKRKKKKTSKDSSMTTTTTNTNESEPPADG 493
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 24 VFSWRLYMPTEPQSPTPNSKTIFTTASSLPITTMPLK 134
V + R +PT P+ P +T T AS L T +P+K
Sbjct: 647 VSTQRAPVPTTPRPTAPAVQTTTTRASRLETTRVPVK 683
>Z49967-10|CAA90254.1| 553|Caenorhabditis elegans Hypothetical
protein F54C9.8 protein.
Length = 553
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +2
Query: 146 IYEDKKS-EVITNVVNKLIRNNKMNCMEYAYQLWMQGSKDIVRECFPVEFTLIFAENNIK 322
+ +DK ++ ++KL N K++C QL + R CF + + FA ++
Sbjct: 308 VCQDKYGCRLVQQTIDKLSDNPKLHCFNTRLQLLHGLMTSVARNCFRLS-SNEFANYVVQ 366
Query: 323 LMYKRDGLALTLRD 364
+ K G+ RD
Sbjct: 367 YVIKSSGVMEMYRD 380
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +3
Query: 72 PNSKTIFTTASSLPITTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TAWSTPTSSGCK 251
P +T + +PITT+PL + +T T +S T + T + ST +++ K
Sbjct: 373 PEKETTKNVSIEIPITTVPLVETTSTTSTASKESDGFHTTLKLKVTTADSDSTESATTVK 432
>U42848-3|AAA83609.1| 693|Caenorhabditis elegans Hypothetical
protein C31H1.1 protein.
Length = 693
Score = 27.1 bits (57), Expect = 8.1
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 20 LCLFVASLYA-NGTSVSDSKLEDDLYNSILVADYDNAVEKSKQIYEDKKSEVITNV 184
L +F +S +A +G S DS L +DL ++I A AVE K +YE + +N+
Sbjct: 451 LDVFDSSSFALSGLSTDDSSL-NDLDDAIRSASIRKAVEGPKGVYECGSWDSASNI 505
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,815,699
Number of Sequences: 27780
Number of extensions: 178195
Number of successful extensions: 799
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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