Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS324E02f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical pr... 130 8e-31
AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl prot... 121 3e-28
U34889-1|AAB06576.1| 388|Caenorhabditis elegans aspartic protea... 92 2e-19
U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protea... 62 5e-18
U97000-5|AAC47991.1| 393|Caenorhabditis elegans Aspartyl protea... 87 7e-18
U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protea... 85 2e-17
U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protea... 60 3e-17
U97000-4|AAC47994.1| 395|Caenorhabditis elegans Hypothetical pr... 85 4e-17
AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical... 83 9e-17
AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic prot... 83 9e-17
AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic prot... 83 9e-17
AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic prot... 78 3e-15
AL132948-20|CAD31821.1| 391|Caenorhabditis elegans Hypothetical... 75 2e-14
Z82092-3|CAB05013.1| 638|Caenorhabditis elegans Hypothetical pr... 74 7e-14
AL021471-3|CAA16297.1| 638|Caenorhabditis elegans Hypothetical ... 74 7e-14
AF045640-8|AAC02571.1| 394|Caenorhabditis elegans Hypothetical ... 74 7e-14
AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical... 73 9e-14
Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical pr... 52 9e-12
AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical... 64 8e-11
U64851-4|AAC47989.1| 389|Caenorhabditis elegans Hypothetical pr... 60 7e-10
AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical ... 60 9e-10
AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical ... 57 9e-09
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81124-11|CAB03370.2| 306|Caenorhabditis elegans Hypothetical p... 29 2.0
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 2.0
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z48178-4|CAA88202.1| 521|Caenorhabditis elegans Hypothetical pr... 28 3.5
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 28 3.5
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 28 4.7
AF025463-4|AAB71010.2| 344|Caenorhabditis elegans Serpentine re... 28 4.7
U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin st... 27 6.2
U29537-6|AAO38648.1| 340|Caenorhabditis elegans Egg laying defe... 27 6.2
U29537-5|AAO38650.1| 414|Caenorhabditis elegans Egg laying defe... 27 6.2
U29537-4|AAO38647.1| 450|Caenorhabditis elegans Egg laying defe... 27 6.2
U29537-3|AAO38646.1| 457|Caenorhabditis elegans Egg laying defe... 27 6.2
U29537-2|AAK31508.1| 465|Caenorhabditis elegans Egg laying defe... 27 6.2
X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin pr... 27 8.1
U56966-6|ABS19472.1| 1558|Caenorhabditis elegans Vitellogenin st... 27 8.1
U56966-5|AAA98720.1| 1613|Caenorhabditis elegans Vitellogenin st... 27 8.1
>Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical
protein R12H7.2 protein.
Length = 444
Score = 130 bits (313), Expect = 8e-31
Identities = 55/89 (61%), Positives = 71/89 (79%)
Frame = +3
Query: 255 DVTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHN 434
+V G E L NY+DAQY+G ISIGTP Q+F V+FDTGSSNLW+PSKKC + +IAC+LH+
Sbjct: 77 NVEGEIDELLRNYMDAQYFGTISIGTPAQNFTVIFDTGSSNLWIPSKKCPFYDIACMLHH 136
Query: 435 KYDSRKSKTYVANGTQFAIQYGSGSLSGF 521
+YDS+ S TY +G + AIQYG+GS+ GF
Sbjct: 137 RYDSKSSSTYKEDGRKMAIQYGTGSMKGF 165
>AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl
protease protein 3 protein.
Length = 398
Score = 121 bits (292), Expect = 3e-28
Identities = 61/137 (44%), Positives = 87/137 (63%), Gaps = 6/137 (4%)
Frame = +3
Query: 126 LFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP------EPLS 287
+F L + + A+ R+ L + R + + G+ E L+ KY V G P E LS
Sbjct: 5 VFLLLALVALASAIQRIKLEKRTYTREQY-KFGSIQEHLKAKY-VPGYIPNKDAFNEGLS 62
Query: 288 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTYV 467
+Y +AQYYG ++IGTPPQ+F+V+FDTGSSNLWVP C + +IAC +HN++D +KS +
Sbjct: 63 DYSNAQYYGPVTIGTPPQNFQVLFDTGSSNLWVPCANCPFGDIACRMHNRFDCKKSSSCT 122
Query: 468 ANGTQFAIQYGSGSLSG 518
A G F IQYG+GS+ G
Sbjct: 123 ATGASFEIQYGTGSMKG 139
>U34889-1|AAB06576.1| 388|Caenorhabditis elegans aspartic protease
protein.
Length = 388
Score = 92.3 bits (219), Expect = 2e-19
Identities = 51/133 (38%), Positives = 72/133 (54%), Gaps = 4/133 (3%)
Frame = +3
Query: 135 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 302
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 303 QYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTYVANGTQ 482
Y G I++GTPPQ VV DTGSSNLWVP C + +C +Y S KS T+ ANG
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVPGPSC---DGSCKGKREYQSTKSSTFKANGKP 123
Query: 483 FAIQYGSGSLSGF 521
+ IQYGSG+ G+
Sbjct: 124 WQIQYGSGNAKGY 136
>U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protease
protein 2, isoforma protein.
Length = 635
Score = 62.5 bits (145), Expect(2) = 5e-18
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 10/111 (9%)
Frame = +3
Query: 99 LKTTMGKISLFFL-ALIASSVMALYRVPLHRMKTARTHFHEVGT------ELELLRLKYD 257
+K G +LF L AL+A+++ A+ +VPL +++ R G + E+ R +
Sbjct: 201 IKIISGMQNLFLLLALVAAALAAVVQVPLVKIEPYRNRLIREGRWVQYRKDREIRRFMMN 260
Query: 258 VTGPSP---EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 401
+ +++Y D Y G I+IGTP Q FKV+ DTGSSNLW+P C
Sbjct: 261 KQSNDMSVGQYVNDYEDEAYVGNITIGTPQQQFKVILDTGSSNLWIPDITC 311
Score = 45.6 bits (103), Expect(2) = 5e-18
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +3
Query: 402 HYTNIACLLHNKYDSRKSKTYVANGTQFAIQYGSGSLSGF 521
+YT+ +C NK+D+ KS +Y NG F I+YG+GS GF
Sbjct: 344 NYTD-SCFYQNKFDASKSSSYKTNGRNFIIEYGTGSARGF 382
>U97000-5|AAC47991.1| 393|Caenorhabditis elegans Aspartyl protease
protein 5 protein.
Length = 393
Score = 87.0 bits (206), Expect = 7e-18
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +3
Query: 270 SPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSR 449
+P+ ++++ D +Y G I+IGTPPQ F VV DTGSSNLWVP C + +C +Y S
Sbjct: 61 APQNVNDFGDFEYLGNITIGTPPQPFLVVLDTGSSNLWVPGPSC---DGSCKGKREYQST 117
Query: 450 KSKTYVANGTQFAIQYGSGSLSGF 521
KS T+ ANG + IQYGSG+ G+
Sbjct: 118 KSSTFKANGKPWQIQYGSGNAKGY 141
>U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protease
protein 6 protein.
Length = 389
Score = 85.4 bits (202), Expect = 2e-17
Identities = 41/82 (50%), Positives = 54/82 (65%)
Frame = +3
Query: 273 PEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRK 452
P+ ++++ D +Y G I+IGTP Q F VV DTGSSNLW+P C TN C +K+DS
Sbjct: 60 PQNVNDFGDFEYLGNITIGTPDQGFIVVLDTGSSNLWIPGPTCK-TN--CKTKSKFDSTA 116
Query: 453 SKTYVANGTQFAIQYGSGSLSG 518
S T+V NG + IQYGSG +G
Sbjct: 117 SSTFVKNGKSWTIQYGSGDAAG 138
>U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protease
protein 2, isoformb protein.
Length = 429
Score = 60.1 bits (139), Expect(2) = 3e-17
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Frame = +3
Query: 135 LALIASSVMALYRVPLHRMKTARTHFHEVGT------ELELLRLKYDVTGPSP---EPLS 287
LAL+A+++ A+ +VPL +++ R G + E+ R + + ++
Sbjct: 8 LALVAAALAAVVQVPLVKIEPYRNRLIREGRWVQYRKDREIRRFMMNKQSNDMSVGQYVN 67
Query: 288 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 401
+Y D Y G I+IGTP Q FKV+ DTGSSNLW+P C
Sbjct: 68 DYEDEAYVGNITIGTPQQQFKVILDTGSSNLWIPDITC 105
Score = 45.6 bits (103), Expect(2) = 3e-17
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +3
Query: 402 HYTNIACLLHNKYDSRKSKTYVANGTQFAIQYGSGSLSGF 521
+YT+ +C NK+D+ KS +Y NG F I+YG+GS GF
Sbjct: 138 NYTD-SCFYQNKFDASKSSSYKTNGRNFIIEYGTGSARGF 176
>U97000-4|AAC47994.1| 395|Caenorhabditis elegans Hypothetical
protein F21F8.4 protein.
Length = 395
Score = 84.6 bits (200), Expect = 4e-17
Identities = 41/87 (47%), Positives = 55/87 (63%)
Frame = +3
Query: 258 VTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNK 437
V +P+ ++++ D +Y G I+IGTPPQ F VV DTGS+NLWVP C T C ++
Sbjct: 57 VFASAPQNVNDFGDVEYLGNITIGTPPQQFIVVLDTGSANLWVPGSNCDGT---CKGKSE 113
Query: 438 YDSRKSKTYVANGTQFAIQYGSGSLSG 518
+DS KS T+ NG + IQY SGS G
Sbjct: 114 FDSSKSTTFKKNGQSWQIQYESGSAKG 140
>AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical
protein Y39B6A.20 protein.
Length = 396
Score = 83.4 bits (197), Expect = 9e-17
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Frame = +3
Query: 135 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 302
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 303 QYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSKTYV 467
Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KS T+V
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTTFV 126
Query: 468 ANGTQFAIQYGSGSLSGF 521
+F+IQYGSGS +G+
Sbjct: 127 KETRKFSIQYGSGSCNGY 144
>AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 83.4 bits (197), Expect = 9e-17
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Frame = +3
Query: 135 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 302
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 303 QYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSKTYV 467
Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KS T+V
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTTFV 126
Query: 468 ANGTQFAIQYGSGSLSGF 521
+F+IQYGSGS +G+
Sbjct: 127 KETRKFSIQYGSGSCNGY 144
>AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 83.4 bits (197), Expect = 9e-17
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Frame = +3
Query: 135 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDA 302
LAL+A+ A+ +VP H+ ++ R + G L ++ +P +Y D
Sbjct: 7 LALVAACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDD 66
Query: 303 QYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSKTYV 467
Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KS T+V
Sbjct: 67 FYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTTFV 126
Query: 468 ANGTQFAIQYGSGSLSGF 521
+F+IQYGSGS +G+
Sbjct: 127 KETRKFSIQYGSGSCNGY 144
>AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic
protease protein.
Length = 395
Score = 78.2 bits (184), Expect = 3e-15
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 9/140 (6%)
Frame = +3
Query: 129 FFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYL 296
F L+ + + A+ +VP H+ ++ R + G L ++ +P +Y
Sbjct: 4 FVLSPLWACSAAVIQVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYF 63
Query: 297 DAQYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSKT 461
D Y G I++GTPPQ VV DTGSSNLWV ++ C+ + K+D+ KS T
Sbjct: 64 DDFYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTT 123
Query: 462 YVANGTQFAIQYGSGSLSGF 521
+V +F+IQYGSGS +G+
Sbjct: 124 FVKETRKFSIQYGSGSCNGY 143
>AL132948-20|CAD31821.1| 391|Caenorhabditis elegans Hypothetical
protein Y39B6A.24 protein.
Length = 391
Score = 75.4 bits (177), Expect = 2e-14
Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Frame = +3
Query: 111 MGKISLFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVT-GPSPEPLS 287
M I L FLA S+ A++++P + R G E L ++ +P+S
Sbjct: 1 MHLIFLLFLAPFCSA--AVFQLPTKSTGSLRAKLIRAGKYQEFLITQHAARLNTISQPIS 58
Query: 288 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC-------LLHNKYDS 446
+Y D Y G ++GTPPQ +V DTGS+N+WV C N+ C K+D+
Sbjct: 59 DYSDEVYLGNFTVGTPPQPVSLVLDTGSANMWVIDASC--DNMFCNGWIGSNYTRQKFDT 116
Query: 447 RKSKTYVANGTQFAIQYGSGSLSGF 521
KS ++ +F+IQYG G SG+
Sbjct: 117 SKSSSFSRENRKFSIQYGKGLCSGY 141
>Z82092-3|CAB05013.1| 638|Caenorhabditis elegans Hypothetical
protein ZK384.3 protein.
Length = 638
Score = 73.7 bits (173), Expect = 7e-14
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Frame = +3
Query: 135 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYG 314
L L+ + A+++VP + R G L + +PL + D G
Sbjct: 5 LLLVTTCSAAVFQVPTTTSGSFRAKLIREGKYSSFLASRLQQLNTGSQPLLGFSDDPCIG 64
Query: 315 VISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN----IACLLHNKYDSRKSKTYVANGTQ 482
I+IG+PPQS V DT S+NLWV C N + ++ +K+++ KS ++V + +
Sbjct: 65 NITIGSPPQSAFVFMDTTSANLWVMGSACTSVNCNDPLLGIIKHKFNTTKSTSFVKSNRK 124
Query: 483 FAIQYGSGSLSGF 521
F IQYGSG SG+
Sbjct: 125 FNIQYGSGECSGY 137
Score = 52.0 bits (119), Expect = 2e-07
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +3
Query: 297 DAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN---IACLLHNKYDSRKSKTYV 467
D G I+IGTPPQS V DT S+N WV KC N + + +K+++ KS ++V
Sbjct: 451 DDSCIGNITIGTPPQSASVFMDTTSANWWVIGSKCTSANCNGYSGIRKHKFNTTKSTSFV 510
Query: 468 ANGTQFAIQYG 500
F+ +YG
Sbjct: 511 EGNRTFSTEYG 521
>AL021471-3|CAA16297.1| 638|Caenorhabditis elegans Hypothetical
protein ZK384.3 protein.
Length = 638
Score = 73.7 bits (173), Expect = 7e-14
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Frame = +3
Query: 135 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYG 314
L L+ + A+++VP + R G L + +PL + D G
Sbjct: 5 LLLVTTCSAAVFQVPTTTSGSFRAKLIREGKYSSFLASRLQQLNTGSQPLLGFSDDPCIG 64
Query: 315 VISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN----IACLLHNKYDSRKSKTYVANGTQ 482
I+IG+PPQS V DT S+NLWV C N + ++ +K+++ KS ++V + +
Sbjct: 65 NITIGSPPQSAFVFMDTTSANLWVMGSACTSVNCNDPLLGIIKHKFNTTKSTSFVKSNRK 124
Query: 483 FAIQYGSGSLSGF 521
F IQYGSG SG+
Sbjct: 125 FNIQYGSGECSGY 137
Score = 52.0 bits (119), Expect = 2e-07
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +3
Query: 297 DAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN---IACLLHNKYDSRKSKTYV 467
D G I+IGTPPQS V DT S+N WV KC N + + +K+++ KS ++V
Sbjct: 451 DDSCIGNITIGTPPQSASVFMDTTSANWWVIGSKCTSANCNGYSGIRKHKFNTTKSTSFV 510
Query: 468 ANGTQFAIQYG 500
F+ +YG
Sbjct: 511 EGNRTFSTEYG 521
>AF045640-8|AAC02571.1| 394|Caenorhabditis elegans Hypothetical
protein C11D2.2 protein.
Length = 394
Score = 73.7 bits (173), Expect = 7e-14
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Frame = +3
Query: 249 KYDVTGPSPEPLSNYLDAQYYGVISIGTP-----PQSFKVVFDTGSSNLWVPSKKCHYTN 413
K+ + + ++++ D Y+G I++GTP Q+F VV DTGSSN+WVP C +
Sbjct: 47 KHTIHKGQHQHVADFRDFAYFGNITLGTPIESTAEQTFLVVLDTGSSNVWVPDNSCGIDD 106
Query: 414 --IACLLHNKYDSRKSKTYVANGTQFAIQYGSGSLSGF 521
AC KY S +Y +GT F+I YG+GS SG+
Sbjct: 107 KKSACTYKKKYFGTDSSSYEKDGTPFSISYGTGSASGY 144
>AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical
protein Y39B6A.23 protein.
Length = 395
Score = 73.3 bits (172), Expect = 9e-14
Identities = 45/141 (31%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Frame = +3
Query: 126 LFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVT----GPSPEPLSNY 293
+F L L+ A+ ++P + R + G E L ++ +PL +Y
Sbjct: 4 VFLLFLVPFCSAAVLQLPTKSTGSLRAKLIQAGKYQEFLASQHAARLQQLNTGSQPLIDY 63
Query: 294 LDAQYYGVISIGTPPQSFKVVFDTGSSNLWV-----PSKKCHYTNIACLLHNKYDSRKSK 458
D Y I++GTPPQ VV DT S+NLWV S+ C+ + K++ KS
Sbjct: 64 YDDMYLANITVGTPPQPASVVLDTASANLWVIDAACNSQACNGNPGSGYTKQKFNPNKSS 123
Query: 459 TYVANGTQFAIQYGSGSLSGF 521
T+V +F+IQYGSG+ SG+
Sbjct: 124 TFVKGTRRFSIQYGSGTSSGY 144
>Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical
protein C15C8.3 protein.
Length = 428
Score = 51.6 bits (118), Expect(2) = 9e-12
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 168 YRVPLHRMKTARTHFHEVGTEL-ELLRLKYDVTGPSPEPLSNYLDAQYYGVISIGTPPQS 344
YR + + A+ E E ELL K S P+ +Y D Y IS+G+P Q+
Sbjct: 25 YRPNMRQRMNAKGKLAEYEKERNELLSKKSLQLASSSSPVIDYEDMAYMVQISLGSPAQN 84
Query: 345 FKVVFDTGSSNLWVPSKKC 401
F + D+GSSNLWVP C
Sbjct: 85 FVLFIDSGSSNLWVPDITC 103
Score = 35.1 bits (77), Expect(2) = 9e-12
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 408 TNIACLLHNKYDSRKSKTYVANGTQFAIQYGSGSLSGF 521
T AC ++++S S +YV NG +F + Y +G + GF
Sbjct: 144 TTDACQSKHRFNSSLSSSYVTNGQKFDMTYNTGEVKGF 181
>AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical
protein Y39B6A.22 protein.
Length = 390
Score = 63.7 bits (148), Expect = 8e-11
Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Frame = +3
Query: 111 MGKISLFFLALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKY-DVTGPSPEPLS 287
M I L F+A S+ A+ ++P + R + G E L ++ PL+
Sbjct: 1 MHLIFLLFIATFCSA--AVLQLPTKSTGSLRAKLIQSGKYPEFLASQHVSRLNSGALPLA 58
Query: 288 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC-----LLHN--KYDS 446
+Y+D Y I++GTPPQS VV TGS+N WV C T+ AC H K+ S
Sbjct: 59 DYMDEIYTANITVGTPPQSASVVMGTGSANFWVVGAGC--TSPACNGFPDSGHTKLKFYS 116
Query: 447 RKSKTYVANGTQFAIQYGSGSLSGF 521
KS ++V +F I Y +G+ SG+
Sbjct: 117 NKSSSFVDLNRKFFINYPTGACSGY 141
>U64851-4|AAC47989.1| 389|Caenorhabditis elegans Hypothetical
protein F28A12.4 protein.
Length = 389
Score = 60.5 bits (140), Expect = 7e-10
Identities = 29/78 (37%), Positives = 44/78 (56%)
Frame = +3
Query: 285 SNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTY 464
++Y+ +Y G I++GTP Q+F VV DTGS+NL +P C C ++ + S TY
Sbjct: 65 TDYVYYEYMGNITVGTPDQNFIVVLDTGSANLLIPGTNC---TTYCEKKRLFNEKASSTY 121
Query: 465 VANGTQFAIQYGSGSLSG 518
+A + I+Y SG G
Sbjct: 122 IATNRPWQIKYASGDAYG 139
>AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical
protein F59D6.2 protein.
Length = 380
Score = 60.1 bits (139), Expect = 9e-10
Identities = 39/128 (30%), Positives = 59/128 (46%)
Frame = +3
Query: 135 LALIASSVMALYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYG 314
LAL+ + + L + R G EL RL+ TG E + ++ D Y
Sbjct: 9 LALLVFCSAGQFSISLEKSVPLREQLIREGRELA--RLQQLSTGN--ESIYDHFDEYYTV 64
Query: 315 VISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTYVANGTQFAIQ 494
+ IGTP Q F+V DT SSNLWV +C + +Y+ S T++A + F +
Sbjct: 65 SVRIGTPAQHFEVALDTTSSNLWVFGVECKSQSCQGHRIREYNRTASSTFIAGTSNFVLP 124
Query: 495 YGSGSLSG 518
+ G +SG
Sbjct: 125 FNDGDVSG 132
>AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical
protein F59D6.3 protein.
Length = 474
Score = 56.8 bits (131), Expect = 9e-09
Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Frame = +3
Query: 114 GKISLFFLALIASSVMALYRVPLHRMKTARTHFHEVGTE-LELLRLKYDVTGPSPEPLSN 290
GK+ + L L+A + + + + + R G EL R++ TG +
Sbjct: 91 GKL-ISLLGLVALCSAGQFSISVEKSGSLREQLIREGRYGQELARIQQLSTGNVS--FFD 147
Query: 291 YLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNI---ACLLHNKYDSRKSKT 461
+ D Y + IGTP Q F+V FDT SSNLWV +C N +Y+ S T
Sbjct: 148 HFDEYYTAGVRIGTPAQHFQVAFDTTSSNLWVFGVECRSQNCHGGRGRRDREYNRTASST 207
Query: 462 YVANGTQFAIQYGSGSLSG 518
+VA + F + Y G +SG
Sbjct: 208 FVAGTSSFNLPYDGGHVSG 226
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = -3
Query: 510 GCRSRTVSRTGCHSRRTSWTCGCRTCCAANKRCWCS 403
GC GC R C CR CC + C C+
Sbjct: 74 GCGGGGGGGCGCCCCRPKCCCCCRRCCTCCRTCCCT 109
>Z81124-11|CAB03370.2| 306|Caenorhabditis elegans Hypothetical
protein T21B4.1 protein.
Length = 306
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 490 IANWVPFATYVLDLRLSYLLCSKQ 419
+ NW F T L +++SYLLC+K+
Sbjct: 243 LQNWSNFGTTPLIIQISYLLCNKR 266
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 390 KAPRGWRIRCRIPP*TTAAACRY*SLRSTEHQDNLTMVRVKG-QSHRILISTAP 232
KAP R ++PP T AAA R S+ +T +R G +S + ++T P
Sbjct: 717 KAPSTVTTRSKVPPPTAAAAVRIVSVTTTTTPTKTAELRKPGARSPKTTVATVP 770
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 480 GCHSRRTSWTCGCRTCCAANKRCWCS 403
GC R C CR CC + C C+
Sbjct: 85 GCCCCRPRCCCCCRRCCTCCRTCCCT 110
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 480 GCHSRRTSWTCGCRTCCAANKRCWCS 403
GC R C CR CC + C C+
Sbjct: 83 GCCCCRPRCCCCCRRCCTCCRTCCCT 108
>Z48178-4|CAA88202.1| 521|Caenorhabditis elegans Hypothetical
protein C05C10.3 protein.
Length = 521
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = +3
Query: 327 GTPPQSFKVVFDTGSSNLWVPSKKCHYTN--IACLLHNKYDSRKSKTYVANGTQFAIQYG 500
G P + + TG L S N + LL + + +YV +FA QY
Sbjct: 65 GIPENLIQAITKTGQKGLTCVSNNAGVDNWGLGLLLQTRQIKKMISSYVGENGEFARQYL 124
Query: 501 SGSL 512
SG L
Sbjct: 125 SGEL 128
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 480 GCHSRRTSWTCGCRTCCAANKRCWCS 403
GC R C CR CC + C C+
Sbjct: 84 GCCCCRPRCCCCCRRCCTCCRTCCCT 109
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 480 GCHSRRTSWTCGCRTCCAANKRCWCS 403
GC R C CR CC + C C+
Sbjct: 85 GCCCCRPRCCCCCRRCCTCCRTCCCT 110
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 459 SWTCGCRTCCAANKRCWCSGTF 394
S CG CA NKRC C T+
Sbjct: 29 STDCGTGNYCAGNKRCACLTTY 50
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -3
Query: 507 CRSRTVSRTGCHSRRTSWTCGC-RTCCAANKRCWCS 403
C S+ RT C S + CGC R CC C+
Sbjct: 159 CGSQPYGRTPCRSGCPNGDCGCGRPCCYYQNPTCCN 194
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = -3
Query: 471 SRRTSWTCGCRTCCAANKRCWCSGTFWKAPRGWRIRCRIPP*TTAAACR 325
+RR +CGC C R CS + + + + C PP C+
Sbjct: 35 TRRKRCSCGCSGCDLFPNRSCCSSSCCSSQKPIPLACCPPPPPPKPCCQ 83
>AF025463-4|AAB71010.2| 344|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 3 protein.
Length = 344
Score = 27.9 bits (59), Expect = 4.7
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = -3
Query: 429 AANKRCWCSGTFWKAPRGWRIRCRIPP*TTAAACRY*SLRSTEHQDNLTMVRVKGQSHRI 250
A N CW + TF A I C P R+ +L+S + + +TM SH+
Sbjct: 192 AGNMSCWSAATF-SAIVYMTIPC-FPIYGVIVFFRHKTLKSLDGRGRITMSETTRSSHKQ 249
Query: 249 LISTAPVQ 226
LI +Q
Sbjct: 250 LIKALTIQ 257
>U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 1 protein.
Length = 1616
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -3
Query: 270 KGQSHRILISTAPVQCQPHESGFSQFSYDVMAPYIVPLRSWRSAPKKIKISFPLLFLEAA 91
+ Q I ++T PV GFS+F Y V + W+ ++I+ F L LE +
Sbjct: 932 ENQKSIISLTTRPVVFLRFP-GFSKFEYIEAEERTVVVPQWQQKTQEIEKVFNFLGLEVS 990
Query: 90 TR 85
TR
Sbjct: 991 TR 992
>U29537-6|AAO38648.1| 340|Caenorhabditis elegans Egg laying
defective protein 44,isoform d protein.
Length = 340
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 253 YFNLNSSSSVPTS*KWVLAVFIRCNGTLYSAITELA-ISAKKNKDIFPIVVF 101
Y NL S++ +PT + + +++CN T S TEL I KD I VF
Sbjct: 125 YHNLFSNNPLPTKQFHLFSAYVKCNKT--SLRTELVKIENTLEKDDIDISVF 174
>U29537-5|AAO38650.1| 414|Caenorhabditis elegans Egg laying
defective protein 44,isoform f protein.
Length = 414
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 253 YFNLNSSSSVPTS*KWVLAVFIRCNGTLYSAITELA-ISAKKNKDIFPIVVF 101
Y NL S++ +PT + + +++CN T S TEL I KD I VF
Sbjct: 199 YHNLFSNNPLPTKQFHLFSAYVKCNKT--SLRTELVKIENTLEKDDIDISVF 248
>U29537-4|AAO38647.1| 450|Caenorhabditis elegans Egg laying
defective protein 44,isoform c protein.
Length = 450
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 253 YFNLNSSSSVPTS*KWVLAVFIRCNGTLYSAITELA-ISAKKNKDIFPIVVF 101
Y NL S++ +PT + + +++CN T S TEL I KD I VF
Sbjct: 235 YHNLFSNNPLPTKQFHLFSAYVKCNKT--SLRTELVKIENTLEKDDIDISVF 284
>U29537-3|AAO38646.1| 457|Caenorhabditis elegans Egg laying
defective protein 44,isoform b protein.
Length = 457
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 253 YFNLNSSSSVPTS*KWVLAVFIRCNGTLYSAITELA-ISAKKNKDIFPIVVF 101
Y NL S++ +PT + + +++CN T S TEL I KD I VF
Sbjct: 242 YHNLFSNNPLPTKQFHLFSAYVKCNKT--SLRTELVKIENTLEKDDIDISVF 291
>U29537-2|AAK31508.1| 465|Caenorhabditis elegans Egg laying
defective protein 44,isoform a protein.
Length = 465
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 253 YFNLNSSSSVPTS*KWVLAVFIRCNGTLYSAITELA-ISAKKNKDIFPIVVF 101
Y NL S++ +PT + + +++CN T S TEL I KD I VF
Sbjct: 250 YHNLFSNNPLPTKQFHLFSAYVKCNKT--SLRTELVKIENTLEKDDIDISVF 299
>X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin
protein.
Length = 1613
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 207 GFSQFSYDVMAPYIVPLRSWRSAPKKIKISFPLLFLEAATR 85
GFS+F Y V + W+ ++I+ F L LE +TR
Sbjct: 950 GFSKFEYIEAEERTVVVPQWQQKTQEIEKVFNFLGLEVSTR 990
>U56966-6|ABS19472.1| 1558|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 2, isoform
b protein.
Length = 1558
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 207 GFSQFSYDVMAPYIVPLRSWRSAPKKIKISFPLLFLEAATR 85
GFS+F Y V + W+ ++I+ F L LE +TR
Sbjct: 950 GFSKFEYIEAEERTVVVPQWQQKTQEIEKVFNFLGLEVSTR 990
>U56966-5|AAA98720.1| 1613|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 2, isoform
a protein.
Length = 1613
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 207 GFSQFSYDVMAPYIVPLRSWRSAPKKIKISFPLLFLEAATR 85
GFS+F Y V + W+ ++I+ F L LE +TR
Sbjct: 950 GFSKFEYIEAEERTVVVPQWQQKTQEIEKVFNFLGLEVSTR 990
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,103,248
Number of Sequences: 27780
Number of extensions: 260009
Number of successful extensions: 746
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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