Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324D09f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p pro...   258   4e-69
AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD...   258   4e-69
AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC...   258   4e-69
AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA...   258   4e-69
BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p pro...   248   4e-66
AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB...   248   4e-66
AY118620-1|AAM49989.1| 1394|Drosophila melanogaster LP11788p pro...    36   0.025
AE014297-4145|AAF56722.1| 1511|Drosophila melanogaster CG5639-PA...    36   0.025
AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA...    31   1.3  

>AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p
           protein.
          Length = 194

 Score =  258 bits (631), Expect = 4e-69
 Identities = 126/159 (79%), Positives = 141/159 (88%)
 Frame = +2

Query: 44  DSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQI 223
           D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI
Sbjct: 16  DDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQI 75

Query: 224 RLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPA 403
            LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPA
Sbjct: 76  ILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPA 135

Query: 404 EIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSV 520
           EIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SV
Sbjct: 136 EIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSV 174


>AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD,
           isoform D protein.
          Length = 194

 Score =  258 bits (631), Expect = 4e-69
 Identities = 126/159 (79%), Positives = 141/159 (88%)
 Frame = +2

Query: 44  DSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQI 223
           D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI
Sbjct: 16  DDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQI 75

Query: 224 RLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPA 403
            LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPA
Sbjct: 76  ILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPA 135

Query: 404 EIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSV 520
           EIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SV
Sbjct: 136 EIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSV 174


>AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC,
           isoform C protein.
          Length = 194

 Score =  258 bits (631), Expect = 4e-69
 Identities = 126/159 (79%), Positives = 141/159 (88%)
 Frame = +2

Query: 44  DSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQI 223
           D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI
Sbjct: 16  DDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQI 75

Query: 224 RLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPA 403
            LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPA
Sbjct: 76  ILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPA 135

Query: 404 EIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSV 520
           EIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SV
Sbjct: 136 EIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSV 174


>AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA,
           isoform A protein.
          Length = 194

 Score =  258 bits (631), Expect = 4e-69
 Identities = 126/159 (79%), Positives = 141/159 (88%)
 Frame = +2

Query: 44  DSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQI 223
           D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI
Sbjct: 16  DDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQI 75

Query: 224 RLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPA 403
            LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPA
Sbjct: 76  ILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPA 135

Query: 404 EIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSV 520
           EIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SV
Sbjct: 136 EIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSV 174


>BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p
           protein.
          Length = 250

 Score =  248 bits (607), Expect = 4e-66
 Identities = 121/153 (79%), Positives = 136/153 (88%)
 Frame = +2

Query: 44  DSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQI 223
           D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI
Sbjct: 16  DDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQI 75

Query: 224 RLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPA 403
            LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPA
Sbjct: 76  ILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPA 135

Query: 404 EIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 502
           EIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKV
Sbjct: 136 EIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKV 168


>AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB,
           isoform B protein.
          Length = 250

 Score =  248 bits (607), Expect = 4e-66
 Identities = 121/153 (79%), Positives = 136/153 (88%)
 Frame = +2

Query: 44  DSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQI 223
           D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI
Sbjct: 16  DDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQI 75

Query: 224 RLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPA 403
            LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPA
Sbjct: 76  ILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPA 135

Query: 404 EIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 502
           EIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKV
Sbjct: 136 EIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKV 168


>AY118620-1|AAM49989.1| 1394|Drosophila melanogaster LP11788p protein.
          Length = 1394

 Score = 36.3 bits (80), Expect = 0.025
 Identities = 36/168 (21%), Positives = 70/168 (41%), Gaps = 13/168 (7%)
 Frame = +2

Query: 41   ADSFETSISQALVELETNSDLKAQLR-ELYITKAKEIELHNKKSIIIYVPMP----KLKA 205
            A + E+S+++ ++EL  NS L +QL  E    K  E++    +++    P P    +  A
Sbjct: 1117 ASAAESSVTERVLEL-ANSLLDSQLSVEQATLKPMELKTTRCRALSKTAPFPVSCDEAGA 1175

Query: 206  FQKIQIR-----LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVY 370
            F+ +Q        V     +    HV   GDR+    P     +         R++ + Y
Sbjct: 1176 FRPLQCNGRSCWCVDAAGNQLQSTHVFGAGDRRCSHVPIEAVAIELHLTNSSGRSIRNAY 1235

Query: 371  DAI---LEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVD 505
            D I   L+ L+    +   R++   DGS +++  L    +  +   ++
Sbjct: 1236 DTIRRELQQLLGGESVENLRVQENFDGSAIVRFELHNEAKVDLAFAIE 1283


>AE014297-4145|AAF56722.1| 1511|Drosophila melanogaster CG5639-PA
            protein.
          Length = 1511

 Score = 36.3 bits (80), Expect = 0.025
 Identities = 36/168 (21%), Positives = 70/168 (41%), Gaps = 13/168 (7%)
 Frame = +2

Query: 41   ADSFETSISQALVELETNSDLKAQLR-ELYITKAKEIELHNKKSIIIYVPMP----KLKA 205
            A + E+S+++ ++EL  NS L +QL  E    K  E++    +++    P P    +  A
Sbjct: 1234 ASAAESSVTERVLEL-ANSLLDSQLSVEQATLKPMELKTTRCRALSKTAPFPVSCDEAGA 1292

Query: 206  FQKIQIR-----LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVY 370
            F+ +Q        V     +    HV   GDR+    P     +         R++ + Y
Sbjct: 1293 FRPLQCNGRSCWCVDAAGNQLQSTHVFGAGDRRCSHVPIEAVAIELHLTNSSGRSIRNAY 1352

Query: 371  DAI---LEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVD 505
            D I   L+ L+    +   R++   DGS +++  L    +  +   ++
Sbjct: 1353 DTIRRELQQLLGGESVENLRVQENFDGSAIVRFELHNEAKVDLAFAIE 1400


>AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA
           protein.
          Length = 1489

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 18/66 (27%), Positives = 36/66 (54%)
 Frame = +2

Query: 158 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 337
           NKK  ++   + KL  +++    +  + + K   KH+  V + K  PK + KT+ + K+K
Sbjct: 567 NKK--LLNSSVVKLSLYEQNPRMVPSKFQPKCEEKHMEPVAEEKPKPKSAAKTKESRKRK 624

Query: 338 RPRSRT 355
           +P ++T
Sbjct: 625 QPVAQT 630


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,737,599
Number of Sequences: 53049
Number of extensions: 430325
Number of successful extensions: 1100
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)