Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324D09f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75714-1|CAB00058.1|  194|Caenorhabditis elegans Hypothetical pr...   201   3e-52
Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical pr...    27   8.1  
X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein.    27   8.1  
U41263-5|AAC24427.1|  400|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF036706-9|AAK39281.1|  681|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z75714-1|CAB00058.1|  194|Caenorhabditis elegans Hypothetical
           protein ZC434.2 protein.
          Length = 194

 Score =  201 bits (490), Expect = 3e-52
 Identities = 94/157 (59%), Positives = 124/157 (78%), Gaps = 1/157 (0%)
 Frame = +2

Query: 53  ETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLV 232
           E  +SQAL++LETN D+++QL+ELYI   KE+EL NK +IIIYVP+P+LKAF KI   LV
Sbjct: 20  EKQVSQALIDLETNDDVQSQLKELYIVGVKEVELGNKSAIIIYVPVPQLKAFHKIHPALV 79

Query: 233 RELEKKFSGKHVVFVGDRKILPKPSHKTRV-ANKQKRPRSRTLTSVYDAILEDLVFPAEI 409
           RELEKKF G+ ++ +  R+ILPKP   ++    KQKRPRSRTLT+V+DA L++LV+PAE+
Sbjct: 80  RELEKKFGGRDILILAKRRILPKPQRGSKARPQKQKRPRSRTLTAVHDAWLDELVYPAEV 139

Query: 410 VGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSV 520
           VG+RIRVKLDG ++ KVHLDK+ QT + HK+  F SV
Sbjct: 140 VGRRIRVKLDGKKVYKVHLDKSHQTNVGHKIGVFASV 176


>Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical protein
            T02C12.1 protein.
          Length = 1017

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 24/90 (26%), Positives = 44/90 (48%)
 Frame = +2

Query: 26   RAVLQADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKA 205
            +A+ Q+  F   +    V+ + N   K+ LR L +T     +L NKK  ++  P+P L++
Sbjct: 853  QALRQSHPFGKVLFSTYVQ-KFNKFNKSSLRVLIVTDRFVAKLENKKFKLLKEPIP-LQS 910

Query: 206  FQKIQIRLVRELEKKFSGKHVVFVGDRKIL 295
              +I +        + +G  V+ VGD  I+
Sbjct: 911  ISRISVC------AESNGLFVIHVGDNDIV 934


>X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein.
          Length = 1017

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 24/90 (26%), Positives = 44/90 (48%)
 Frame = +2

Query: 26   RAVLQADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKA 205
            +A+ Q+  F   +    V+ + N   K+ LR L +T     +L NKK  ++  P+P L++
Sbjct: 853  QALRQSHPFGKVLFSTYVQ-KFNKFNKSSLRVLIVTDRFVAKLENKKFKLLKEPIP-LQS 910

Query: 206  FQKIQIRLVRELEKKFSGKHVVFVGDRKIL 295
              +I +        + +G  V+ VGD  I+
Sbjct: 911  ISRISVC------AESNGLFVIHVGDNDIV 934


>U41263-5|AAC24427.1|  400|Caenorhabditis elegans Hypothetical
           protein T19D12.7 protein.
          Length = 400

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -2

Query: 301 LRQDLTVSNKDYMFTTELLFELTDKPDLDLLKGLQFRHRHIDD 173
           L+QD     K +MF    +F   DK  +D  + L+F+  + DD
Sbjct: 167 LQQDFRSFQKVWMFNKTEMFSADDKTFIDSNRSLEFQVLNEDD 209


>AF036706-9|AAK39281.1|  681|Caenorhabditis elegans Hypothetical
           protein T07A9.9a protein.
          Length = 681

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
 Frame = +2

Query: 17  RSKRAVLQADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPK 196
           R +  + QA  +E+ +     E +    L  Q+RE    K K + L +  +  I   +  
Sbjct: 504 REEELLEQAGEYESDLDSDDEETKEKLKLALQIRE----KEKLLTLDHAVNKRIAGRIGS 559

Query: 197 LKAFQKIQIRLVRELEKKFSGKHVVFVGDRKI--LPKPSHKTRVANKQKRPRSRTLTSVY 370
                + + R +  LE +  G+  V V  +K+  L     K ++  K K  RSR+L++V 
Sbjct: 560 RIHGSRKRDRSMSRLENEL-GELGVDVDTKKMKNLQGQCAKPQLGKKMKVGRSRSLSAVR 618

Query: 371 DAILEDLVFPAE 406
            A  ++L FP E
Sbjct: 619 PAPRDELAFPDE 630


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,057,511
Number of Sequences: 27780
Number of extensions: 215691
Number of successful extensions: 603
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)