Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324D06f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   1.2  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   2.7  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    24   3.6  
AY193730-1|AAO62003.1|  441|Anopheles gambiae cytochrome P450 CY...    23   8.2  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +3

Query: 78  CGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLED 188
           C PK+ + G+VL+V  ++ L  M V    + +  + D
Sbjct: 762 CPPKVFMLGIVLAVIAVVVLIGMAVLLLWKVLTSIHD 798


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 332 KLMSRYNQCNQVQQCRNPTVLCIQGIS 252
           +L+ +YNQ +Q  QC    +L   G S
Sbjct: 360 ELLRKYNQSSQGSQCNQAIMLITDGPS 386


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -1

Query: 452 LHIATCFWQKKKQFYNGMELTAKITTPSILHTN 354
           L +   F Q+ KQF N     AK  +P   H+N
Sbjct: 144 LRLKHTFAQEAKQFCNAEIRAAKADSPENCHSN 176


>AY193730-1|AAO62003.1|  441|Anopheles gambiae cytochrome P450
           CYPm3r10 protein.
          Length = 441

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = +3

Query: 141 LMGVFYYIRAVALLEDLPFDEKNPPHSIEDFVIEVEKGYTLNAQNCWIAALLYLITLVVS 320
           L+GV+ + + VAL+ DL   E      ++DF    ++G   N ++  + A L+ I     
Sbjct: 12  LVGVYLFFKPVALITDL---ELLKCVFVKDFQYFHDRGTYYNEKHDPLTAHLFNIE---- 64

Query: 321 GHQFWLNNRSSVS 359
             Q W N R+ +S
Sbjct: 65  -GQKWKNLRNKLS 76


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,851
Number of Sequences: 2352
Number of extensions: 10979
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)