Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324D05f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004494-1|AAO42658.1| 1113|Drosophila melanogaster GH24302p pro...    29   3.8  
AE014296-2185|AAN11856.1| 1047|Drosophila melanogaster CG32106-P...    29   3.8  
AY119594-1|AAM50248.1|  472|Drosophila melanogaster LD17927p pro...    29   5.1  
AE014298-1409|AAF46553.2|  472|Drosophila melanogaster CG2972-PA...    29   5.1  
AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein...    28   8.8  

>BT004494-1|AAO42658.1| 1113|Drosophila melanogaster GH24302p
           protein.
          Length = 1113

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 322 RHNVKDIVEKLRKDQKASSSKSRYEIVNCNR-SIEKDTDNFN 444
           +HN  + V  L KD+   S    YE+V CN  S E++T N N
Sbjct: 579 KHNCPENVLVL-KDETCESDSDDYELVRCNDISTEEETVNAN 619


>AE014296-2185|AAN11856.1| 1047|Drosophila melanogaster CG32106-PA
           protein.
          Length = 1047

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 322 RHNVKDIVEKLRKDQKASSSKSRYEIVNCNR-SIEKDTDNFN 444
           +HN  + V  L KD+   S    YE+V CN  S E++T N N
Sbjct: 461 KHNCPENVLVL-KDETCESDSDDYELVRCNDISTEEETVNAN 501


>AY119594-1|AAM50248.1|  472|Drosophila melanogaster LD17927p
           protein.
          Length = 472

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +1

Query: 106 EVFIKNMSSQTVIRVKRRLEDNPHDALVVTCKRPKTDPESCQSL 237
           +VF  N  ++T+ RV   L++N    + +  +RP T+    QSL
Sbjct: 341 KVFCPNCGNKTLKRVAVSLDENGRQVIHINTRRPLTNKYKNQSL 384


>AE014298-1409|AAF46553.2|  472|Drosophila melanogaster CG2972-PA
           protein.
          Length = 472

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +1

Query: 106 EVFIKNMSSQTVIRVKRRLEDNPHDALVVTCKRPKTDPESCQSL 237
           +VF  N  ++T+ RV   L++N    + +  +RP T+    QSL
Sbjct: 341 KVFCPNCGNKTLKRVAVSLDENGRQVIHINTRRPLTNKYKNQSL 384


>AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein
            protein.
          Length = 2797

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 245  FEPLSPIRKQLISKIWCL-QPISNCNRDIMSRI 340
            +  L P RK L+ + WC+ + IS C + I + +
Sbjct: 2377 YNSLDPFRKMLLVRSWCMDRTISQCRKYIANSL 2409


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,537,844
Number of Sequences: 53049
Number of extensions: 372946
Number of successful extensions: 996
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)