Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS324D05f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025715-4|AAP13754.1| 301|Caenorhabditis elegans Hypothetical ... 29 1.5
AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical ... 29 2.0
Z81135-3|CAB03456.1| 251|Caenorhabditis elegans Hypothetical pr... 29 2.7
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 29 2.7
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 29 2.7
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 29 2.7
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 29 2.7
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 29 2.7
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 29 2.7
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 29 2.7
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 29 2.7
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 29 2.7
U28733-1|AAA68302.2| 982|Caenorhabditis elegans Patched related... 28 4.7
>AC025715-4|AAP13754.1| 301|Caenorhabditis elegans Hypothetical
protein Y38F2AR.13 protein.
Length = 301
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Frame = +1
Query: 196 CKRPKTDPESCQSLFVFR-------ATITNQETADIKDLVSPADFKLQPRHNVKDIVEKL 354
C RP PE C SL V R I ++ +KD+++ +F +QP +++IV K
Sbjct: 171 CPRPWIAPEGCISLPVVRWMAESALVLIVSKLGIQLKDVITTYEFAVQP-IAIREIVRKE 229
Query: 355 RKDQKA 372
+ +K+
Sbjct: 230 KSAKKS 235
>AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical
protein Y43F4B.6 protein.
Length = 1083
Score = 29.1 bits (62), Expect = 2.0
Identities = 23/95 (24%), Positives = 42/95 (44%)
Frame = +1
Query: 61 SLLSHIFIVFLCCILEVFIKNMSSQTVIRVKRRLEDNPHDALVVTCKRPKTDPESCQSLF 240
SL + F VFL CI + + +R R + + +V K PK + +
Sbjct: 292 SLGGNSFTVFLACISPADSNSQETLNTLRYADRAKQIKNKPIVN--KNPKAEEIAILQAQ 349
Query: 241 VFRATITNQETADIKDLVSPADFKLQPRHNVKDIV 345
+ R +E AD+K ++PA+ + +N +I+
Sbjct: 350 LKRL---QKENADLKQGIAPAEVRFNDANNSAEIL 381
>Z81135-3|CAB03456.1| 251|Caenorhabditis elegans Hypothetical
protein W01G7.4 protein.
Length = 251
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 139 VIRVKRRLEDNPHDALVVTCKRPK 210
+IRV R+ +PHDAL++ KR K
Sbjct: 5 LIRVSRKRTADPHDALILHTKRAK 28
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -3
Query: 405 VDYFITTFA*RSLLVFS*LFNNILDIMSRLQFEIGWRHQIFDISCFLIGDSGSKY 241
V Y +T F ++V + +F I+D L+ E + QI +CF+ G S++
Sbjct: 2695 VAYDMTFFVVLIVIVLNLIFGVIIDTFGDLRAEKNEKEQILKNNCFICGLDRSRF 2749
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -3
Query: 405 VDYFITTFA*RSLLVFS*LFNNILDIMSRLQFEIGWRHQIFDISCFLIGDSGSKY 241
V Y +T F ++V + +F I+D L+ E + QI +CF+ G S++
Sbjct: 2674 VAYDMTFFVVLIVIVLNLIFGVIIDTFGDLRAEKNEKEQILKNNCFICGLDRSRF 2728
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -3
Query: 405 VDYFITTFA*RSLLVFS*LFNNILDIMSRLQFEIGWRHQIFDISCFLIGDSGSKY 241
V Y +T F ++V + +F I+D L+ E + QI +CF+ G S++
Sbjct: 2730 VAYDMTFFVVLIVIVLNLIFGVIIDTFGDLRAEKNEKEQILKNNCFICGLDRSRF 2784
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -3
Query: 405 VDYFITTFA*RSLLVFS*LFNNILDIMSRLQFEIGWRHQIFDISCFLIGDSGSKY 241
V Y +T F ++V + +F I+D L+ E + QI +CF+ G S++
Sbjct: 2684 VAYDMTFFVVLIVIVLNLIFGVIIDTFGDLRAEKNEKEQILKNNCFICGLDRSRF 2738
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -3
Query: 405 VDYFITTFA*RSLLVFS*LFNNILDIMSRLQFEIGWRHQIFDISCFLIGDSGSKY 241
V Y +T F ++V + +F I+D L+ E + QI +CF+ G S++
Sbjct: 2684 VAYDMTFFVVLIVIVLNLIFGVIIDTFGDLRAEKNEKEQILKNNCFICGLDRSRF 2738
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -3
Query: 405 VDYFITTFA*RSLLVFS*LFNNILDIMSRLQFEIGWRHQIFDISCFLIGDSGSKY 241
V Y +T F ++V + +F I+D L+ E + QI +CF+ G S++
Sbjct: 2695 VAYDMTFFVVLIVIVLNLIFGVIIDTFGDLRAEKNEKEQILKNNCFICGLDRSRF 2749
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -3
Query: 405 VDYFITTFA*RSLLVFS*LFNNILDIMSRLQFEIGWRHQIFDISCFLIGDSGSKY 241
V Y +T F ++V + +F I+D L+ E + QI +CF+ G S++
Sbjct: 2684 VAYDMTFFVVLIVIVLNLIFGVIIDTFGDLRAEKNEKEQILKNNCFICGLDRSRF 2738
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -3
Query: 405 VDYFITTFA*RSLLVFS*LFNNILDIMSRLQFEIGWRHQIFDISCFLIGDSGSKY 241
V Y +T F ++V + +F I+D L+ E + QI +CF+ G S++
Sbjct: 2674 VAYDMTFFVVLIVIVLNLIFGVIIDTFGDLRAEKNEKEQILKNNCFICGLDRSRF 2728
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -3
Query: 405 VDYFITTFA*RSLLVFS*LFNNILDIMSRLQFEIGWRHQIFDISCFLIGDSGSKY 241
V Y +T F ++V + +F I+D L+ E + QI +CF+ G S++
Sbjct: 2730 VAYDMTFFVVLIVIVLNLIFGVIIDTFGDLRAEKNEKEQILKNNCFICGLDRSRF 2784
>U28733-1|AAA68302.2| 982|Caenorhabditis elegans Patched related
family protein 6 protein.
Length = 982
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 286 DLVSPADFKLQPRHNVKDIVEKLRKDQKASSSKSRYEIVNCNRSIEKDTDN 438
D+ + D LQP N+K K RKD KA K + N IE++ +N
Sbjct: 493 DIYTIEDGSLQP--NLKKKKSKSRKDAKAEKEKKDEAKNDKNMEIEENAEN 541
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,419,277
Number of Sequences: 27780
Number of extensions: 202896
Number of successful extensions: 592
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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