Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324D04f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U36787-1|AAB19007.1|  268|Homo sapiens holocytochrome c-type syn...   140   4e-33
BC095455-1|AAH95455.1|  268|Homo sapiens holocytochrome c syntha...   140   4e-33
BC001691-1|AAH01691.1|  268|Homo sapiens HCCS protein protein.        140   4e-33
AF053015-1|AAC35274.1|  268|Homo sapiens putative holocytochrome...   140   4e-33
AB065616-1|BAC05843.1|  312|Homo sapiens seven transmembrane hel...    31   1.9  

>U36787-1|AAB19007.1|  268|Homo sapiens holocytochrome c-type
           synthetase protein.
          Length = 268

 Score =  140 bits (338), Expect = 4e-33
 Identities = 68/128 (53%), Positives = 85/128 (66%), Gaps = 5/128 (3%)
 Frame = +1

Query: 142 PMHNKTEQKPKVSECPV-----QHGNDINPFXXXXXXXXXXXXDQPFTLPTNRQVSSIPR 306
           P H   E+  +  ECP+     ++  +++P             DQPF L T R+ SSIPR
Sbjct: 54  PAHQ--ERAYEYVECPIRGTAAENKENLDPSNLMPPPNQTPAPDQPFALSTVREESSIPR 111

Query: 307 AMPDGSTEFWVYPSQQMFWNAMLRKGWRWKDEDIKPKEMDDIIRIHNANNEQAWQEVLKW 486
           A    S + WVYPS+QMFWNAML+KGW+WKDEDI  K+M +IIRIHN NNEQAW+E+LKW
Sbjct: 112 A---DSEKKWVYPSEQMFWNAMLKKGWKWKDEDISQKDMYNIIRIHNQNNEQAWKEILKW 168

Query: 487 EALHAKEC 510
           EALHA EC
Sbjct: 169 EALHAAEC 176


>BC095455-1|AAH95455.1|  268|Homo sapiens holocytochrome c synthase
           (cytochrome c heme-lyase) protein.
          Length = 268

 Score =  140 bits (338), Expect = 4e-33
 Identities = 68/128 (53%), Positives = 85/128 (66%), Gaps = 5/128 (3%)
 Frame = +1

Query: 142 PMHNKTEQKPKVSECPV-----QHGNDINPFXXXXXXXXXXXXDQPFTLPTNRQVSSIPR 306
           P H   E+  +  ECP+     ++  +++P             DQPF L T R+ SSIPR
Sbjct: 54  PAHQ--ERAYEYVECPIRGTAAENKENLDPSNLMPPPNQTPAPDQPFALSTVREESSIPR 111

Query: 307 AMPDGSTEFWVYPSQQMFWNAMLRKGWRWKDEDIKPKEMDDIIRIHNANNEQAWQEVLKW 486
           A    S + WVYPS+QMFWNAML+KGW+WKDEDI  K+M +IIRIHN NNEQAW+E+LKW
Sbjct: 112 A---DSEKKWVYPSEQMFWNAMLKKGWKWKDEDISQKDMYNIIRIHNQNNEQAWKEILKW 168

Query: 487 EALHAKEC 510
           EALHA EC
Sbjct: 169 EALHAAEC 176


>BC001691-1|AAH01691.1|  268|Homo sapiens HCCS protein protein.
          Length = 268

 Score =  140 bits (338), Expect = 4e-33
 Identities = 68/128 (53%), Positives = 85/128 (66%), Gaps = 5/128 (3%)
 Frame = +1

Query: 142 PMHNKTEQKPKVSECPV-----QHGNDINPFXXXXXXXXXXXXDQPFTLPTNRQVSSIPR 306
           P H   E+  +  ECP+     ++  +++P             DQPF L T R+ SSIPR
Sbjct: 54  PAHQ--ERAYEYVECPIRGTAAENKENLDPSNLMPPPNQTPAPDQPFALSTVREESSIPR 111

Query: 307 AMPDGSTEFWVYPSQQMFWNAMLRKGWRWKDEDIKPKEMDDIIRIHNANNEQAWQEVLKW 486
           A    S + WVYPS+QMFWNAML+KGW+WKDEDI  K+M +IIRIHN NNEQAW+E+LKW
Sbjct: 112 A---DSEKKWVYPSEQMFWNAMLKKGWKWKDEDISQKDMYNIIRIHNQNNEQAWKEILKW 168

Query: 487 EALHAKEC 510
           EALHA EC
Sbjct: 169 EALHAAEC 176


>AF053015-1|AAC35274.1|  268|Homo sapiens putative holocytochrome
           c-type synthetase protein.
          Length = 268

 Score =  140 bits (338), Expect = 4e-33
 Identities = 68/128 (53%), Positives = 85/128 (66%), Gaps = 5/128 (3%)
 Frame = +1

Query: 142 PMHNKTEQKPKVSECPV-----QHGNDINPFXXXXXXXXXXXXDQPFTLPTNRQVSSIPR 306
           P H   E+  +  ECP+     ++  +++P             DQPF L T R+ SSIPR
Sbjct: 54  PAHQ--ERAYEYVECPIRGTAAENKENLDPSNLMPPPNQTPAPDQPFALSTVREESSIPR 111

Query: 307 AMPDGSTEFWVYPSQQMFWNAMLRKGWRWKDEDIKPKEMDDIIRIHNANNEQAWQEVLKW 486
           A    S + WVYPS+QMFWNAML+KGW+WKDEDI  K+M +IIRIHN NNEQAW+E+LKW
Sbjct: 112 A---DSEKKWVYPSEQMFWNAMLKKGWKWKDEDISQKDMYNIIRIHNQNNEQAWKEILKW 168

Query: 487 EALHAKEC 510
           EALHA EC
Sbjct: 169 EALHAAEC 176


>AB065616-1|BAC05843.1|  312|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 312

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
 Frame = -1

Query: 251 AGCWLAG---GIMLNGL-ISFPCCTGHSETFGFCSVLLCIGHSGGGFTSFSPIFILT*AS 84
           +GCW  G   G ML  + +SFP C  H     FC V   +  S    TS   IF+     
Sbjct: 146 SGCWFVGSVDGFMLTPIAMSFPFCRSHEIQHFFCEVPAVLKLSCSD-TSLYKIFMYLCCV 204

Query: 83  ADTLFPICMSYVS 45
              L P+ +  VS
Sbjct: 205 IMLLIPVTVISVS 217


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,000,473
Number of Sequences: 237096
Number of extensions: 1994612
Number of successful extensions: 4412
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4406
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)