BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS324D04f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118889-1|AAM50749.1| 281|Drosophila melanogaster HL08191p pro... 198 4e-51
AE014297-3084|AAF55946.1| 281|Drosophila melanogaster CG6022-PA... 198 4e-51
BT015199-1|AAT94428.1| 335|Drosophila melanogaster RE69682p pro... 29 3.8
AE014298-2505|AAF48684.1| 335|Drosophila melanogaster CG13001-P... 29 3.8
>AY118889-1|AAM50749.1| 281|Drosophila melanogaster HL08191p
protein.
Length = 281
Score = 198 bits (483), Expect = 4e-51
Identities = 92/144 (63%), Positives = 101/144 (70%), Gaps = 13/144 (9%)
Frame = +1
Query: 127 PPPECPMHNK---------TEQKPKV---SECPVQHGN-DINPFXXXXXXXXXXXXDQPF 267
PPPECPMH K PK+ SECPVQH N D+NP DQPF
Sbjct: 31 PPPECPMHQKHGDAKSASAVPPHPKMQAASECPVQHDNSDVNPLNMMPPANQQPAADQPF 90
Query: 268 TLPTNRQVSSIPRAMPDGSTEFWVYPSQQMFWNAMLRKGWRWKDEDIKPKEMDDIIRIHN 447
LPT+RQ S+IP+ DGS +FW YPSQQMFWNAMLRKGWRWK ED+ K+M DIIRIHN
Sbjct: 91 PLPTDRQTSTIPKVTEDGSVQFWQYPSQQMFWNAMLRKGWRWKTEDVSQKDMGDIIRIHN 150
Query: 448 ANNEQAWQEVLKWEALHAKECGHP 519
ANNEQAWQEVLKWEALHAKECG+P
Sbjct: 151 ANNEQAWQEVLKWEALHAKECGNP 174
>AE014297-3084|AAF55946.1| 281|Drosophila melanogaster CG6022-PA
protein.
Length = 281
Score = 198 bits (483), Expect = 4e-51
Identities = 92/144 (63%), Positives = 101/144 (70%), Gaps = 13/144 (9%)
Frame = +1
Query: 127 PPPECPMHNK---------TEQKPKV---SECPVQHGN-DINPFXXXXXXXXXXXXDQPF 267
PPPECPMH K PK+ SECPVQH N D+NP DQPF
Sbjct: 31 PPPECPMHQKHGDAKSASAVPPHPKMQAASECPVQHDNSDVNPLNMMPPANQQPAADQPF 90
Query: 268 TLPTNRQVSSIPRAMPDGSTEFWVYPSQQMFWNAMLRKGWRWKDEDIKPKEMDDIIRIHN 447
LPT+RQ S+IP+ DGS +FW YPSQQMFWNAMLRKGWRWK ED+ K+M DIIRIHN
Sbjct: 91 PLPTDRQTSTIPKVTEDGSVQFWQYPSQQMFWNAMLRKGWRWKTEDVSQKDMGDIIRIHN 150
Query: 448 ANNEQAWQEVLKWEALHAKECGHP 519
ANNEQAWQEVLKWEALHAKECG+P
Sbjct: 151 ANNEQAWQEVLKWEALHAKECGNP 174
>BT015199-1|AAT94428.1| 335|Drosophila melanogaster RE69682p
protein.
Length = 335
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 67 GNKVSAEAHVNIKIGEKDVN-PPPECPMHNKTEQKPKV 177
G+ +A A +++G+ D + PPP P N+ +Q P +
Sbjct: 238 GSAAAAAAAAAVRLGKGDFSAPPPPPPPSNRLQQSPSI 275
>AE014298-2505|AAF48684.1| 335|Drosophila melanogaster CG13001-PA
protein.
Length = 335
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 67 GNKVSAEAHVNIKIGEKDVN-PPPECPMHNKTEQKPKV 177
G+ +A A +++G+ D + PPP P N+ +Q P +
Sbjct: 238 GSAAAAAAAAAVRLGKGDFSAPPPPPPPSNRLQQSPSI 275
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,022,305
Number of Sequences: 53049
Number of extensions: 602557
Number of successful extensions: 1417
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1413
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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