Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324D04f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49130-4|CAA88969.1|  280|Caenorhabditis elegans Hypothetical pr...   128   2e-30
Z98851-1|CAB11539.2|  327|Caenorhabditis elegans Hypothetical pr...    30   1.2  
U88315-8|AAN84845.1|  472|Caenorhabditis elegans Nematode astaci...    29   1.5  
U88315-7|AAL16314.1|  546|Caenorhabditis elegans Nematode astaci...    29   1.5  
U88315-6|AAB42372.1|  517|Caenorhabditis elegans Nematode astaci...    29   1.5  
U61947-8|AAB03133.1|   64|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U28940-6|AAA68352.1|  925|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z75710-2|CAB00025.2|  381|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z69788-1|CAA93646.1|  894|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U80032-5|AAB53878.1|  552|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U00031-5|AAP68960.1|  534|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AF024492-5|AAF98621.1|  334|Caenorhabditis elegans Serpentine re...    28   4.7  

>Z49130-4|CAA88969.1|  280|Caenorhabditis elegans Hypothetical
           protein T06D8.6 protein.
          Length = 280

 Score =  128 bits (309), Expect = 2e-30
 Identities = 54/88 (61%), Positives = 67/88 (76%)
 Frame = +1

Query: 256 DQPFTLPTNRQVSSIPRAMPDGSTEFWVYPSQQMFWNAMLRKGWRWKDEDIKPKEMDDII 435
           DQPF LPT R+ S+IP+A  +  TE W YPS QMFWNAML+KGWRW+D+ +   +M++II
Sbjct: 83  DQPFALPTKREKSTIPKAGTE--TETWTYPSPQMFWNAMLKKGWRWQDDSLSKSDMENII 140

Query: 436 RIHNANNEQAWQEVLKWEALHAKECGHP 519
            IHNANNE+AW+EVLKWE L   EC  P
Sbjct: 141 SIHNANNEEAWREVLKWENLLHPECAEP 168


>Z98851-1|CAB11539.2|  327|Caenorhabditis elegans Hypothetical
           protein H12I19.1 protein.
          Length = 327

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
 Frame = -3

Query: 489 FPFQNFLPSLF----IISIMYPNYIVHLFWFYILIFP 391
           F  QNFL        ++S++Y    + LF FYIL+FP
Sbjct: 7   FENQNFLAKFIDEGILLSVLYVLIFIILFLFYILVFP 43


>U88315-8|AAN84845.1|  472|Caenorhabditis elegans Nematode astacin
           protease protein9, isoform c protein.
          Length = 472

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 91  HVNIKIGEKDVNPPPECPMHNKTEQKPKVSE 183
           H N  +G KD N P   P+ N  E  PK+ +
Sbjct: 385 HYNAYLGAKDPNKPTMIPLVNPQENTPKLGQ 415


>U88315-7|AAL16314.1|  546|Caenorhabditis elegans Nematode astacin
           protease protein9, isoform b protein.
          Length = 546

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 91  HVNIKIGEKDVNPPPECPMHNKTEQKPKVSE 183
           H N  +G KD N P   P+ N  E  PK+ +
Sbjct: 459 HYNAYLGAKDPNKPTMIPLVNPQENTPKLGQ 489


>U88315-6|AAB42372.1|  517|Caenorhabditis elegans Nematode astacin
           protease protein9, isoform a protein.
          Length = 517

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 91  HVNIKIGEKDVNPPPECPMHNKTEQKPKVSE 183
           H N  +G KD N P   P+ N  E  PK+ +
Sbjct: 430 HYNAYLGAKDPNKPTMIPLVNPQENTPKLGQ 460


>U61947-8|AAB03133.1|   64|Caenorhabditis elegans Hypothetical
           protein C06G3.3 protein.
          Length = 64

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +1

Query: 274 PTNRQVSSIPRAMPDGSTEFWVYPSQQMFWNAMLRK 381
           P+N  VS  P+ +P G  E+W+ P    F N + RK
Sbjct: 26  PSNSPVSPSPQEVPRGKKEWWL-PFNIPFHNEIFRK 60


>U28940-6|AAA68352.1|  925|Caenorhabditis elegans Hypothetical
           protein T24H7.2 protein.
          Length = 925

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +1

Query: 85  EAHVNIKIGEKDVNPPPECPMHNKTEQKPKVSE 183
           E   ++K+ +    P PE P+++ +E+ PK +E
Sbjct: 598 EEKESVKVEDSTPEPEPETPVNSTSEESPKTNE 630


>Z75710-2|CAB00025.2|  381|Caenorhabditis elegans Hypothetical
           protein D1081.4 protein.
          Length = 381

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 164 RSQRFRNVQYNMEMISIHST*CLRLTNNLHQIS 262
           R     ++  NMEM  I +T C   TN+LH+I+
Sbjct: 239 RDPEDNSIHSNMEMEFIQNTTCKSYTNSLHKIA 271


>Z69788-1|CAA93646.1|  894|Caenorhabditis elegans Hypothetical
           protein F09A5.2 protein.
          Length = 894

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 20/65 (30%), Positives = 32/65 (49%)
 Frame = +1

Query: 1   LVPNSARGDLLLF*RLT*DIQMGNKVSAEAHVNIKIGEKDVNPPPECPMHNKTEQKPKVS 180
           +V   ARGDLL F R   D  + N+V  E  ++I   +  + P  E    +K   + K  
Sbjct: 559 VVEYCARGDLLKFLRRHKDYVLMNRVHIELCISIYKFKLKLRPNIEI---SKISFQNKTD 615

Query: 181 ECPVQ 195
           +CP++
Sbjct: 616 DCPIE 620


>U80032-5|AAB53878.1|  552|Caenorhabditis elegans Hypothetical
           protein C32E12.1 protein.
          Length = 552

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +1

Query: 55  DIQMGNKVSAEAHVNIKIGEKDVNPPPECPMHNKT-EQKPKVSECPVQHGNDINP 216
           +++ G+K    A   IK  +KD     + P   K+ E+KPK ++       D+ P
Sbjct: 56  NVKKGSKSDPNAVAKIKKNKKDKKSKDKKPKDKKSKEKKPKAAKSKEVKSKDVKP 110


>U00031-5|AAP68960.1|  534|Caenorhabditis elegans Hypothetical
           protein B0361.11 protein.
          Length = 534

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
 Frame = -3

Query: 216 WIDIISMLYWTFRNLWLLLRFVMHRALRWRIHIFLSDFYINVSLSRHL--IPHLYVLRKS 43
           WI ++  + W+   +W LL  +M    RWR  I         +L   L   PH  + +  
Sbjct: 233 WITVVYNVAWSLGMVWTLLVTLMTDDWRWRYFIVSLPGVYGFALWYFLPESPHWLITKNK 292

Query: 42  SEEEK 28
           +E+ K
Sbjct: 293 TEKLK 297


>AF024492-5|AAF98621.1|  334|Caenorhabditis elegans Serpentine
           receptor, class h protein129 protein.
          Length = 334

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = -3

Query: 504 FGV*GFPFQN-FLPSLFIISIMYPNYIVHLFWFYILIFPTPA 382
           FG  GF  Q  ++ +L I++++     +HLF  Y+++F TPA
Sbjct: 4   FGDSGFASQQTYVATLHIMAVL--QVPIHLFGGYVILFRTPA 43


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,232,510
Number of Sequences: 27780
Number of extensions: 300713
Number of successful extensions: 820
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)