Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324D04f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   1.9  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   7.7  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   7.7  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   7.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.7  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = +1

Query: 427 DIIRIHNANNEQAWQEVLKWEALHAKEC 510
           D+    ++ N Q+WQ +     LH   C
Sbjct: 75  DVHHFESSFNAQSWQRLTSLHELHVHGC 102


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 94  VNIKIGEKDVNPPPECP 144
           VNI +G+ D  P P  P
Sbjct: 328 VNIVLGDSDTPPKPAPP 344


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +1

Query: 439 IHNANNEQAWQEVLKWEALHAK 504
           ++  N  Q W E L W+ +  K
Sbjct: 94  LYPPNKLQQWNEDLNWQPIATK 115


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +1

Query: 439 IHNANNEQAWQEVLKWEALHAK 504
           ++  N  Q W E L W+ +  K
Sbjct: 109 LYPPNKLQQWNEDLNWQPIATK 130


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -3

Query: 354 LLTWINPEFS*AIRHCSRNRGNLSVCRQGEWLIW 253
           LL + NPE    IRH  R   ++ +    E + W
Sbjct: 72  LLRFENPETHHPIRHGRRQSRSMDLNAHREQMSW 105


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,526
Number of Sequences: 438
Number of extensions: 4070
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)