Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324D02f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   1.5  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   2.0  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   3.6  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   8.2  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 275 TPGQV*ECGSRVVAAHQASRELVDMSGSTNP 183
           +PGQV E G          +EL+D++ S NP
Sbjct: 403 SPGQVLERGEEEPVRDVNEQELLDIASSLNP 433


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 42  PALSASQPYYTKHIRRASSSLG 107
           PAL A  PYY   +    SSLG
Sbjct: 471 PALLADAPYYVSKLPSDESSLG 492


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 326  EPRRCARGQRHPLTKHQHSLRAPTYFN 406
            E RRC R + +   +HQ  L  P  +N
Sbjct: 1012 EGRRCDRCKENKYDRHQGCLDCPACYN 1038


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
 Frame = +2

Query: 218 GSLDAQRPRGSHTP-TPDRASCQCDP 292
           GSLD  RP G+  P +P   S    P
Sbjct: 823 GSLDMHRPEGNRGPSSPSSTSGAASP 848


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,245
Number of Sequences: 2352
Number of extensions: 8976
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)