Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS324C11f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46787-10|CAA86749.1| 154|Caenorhabditis elegans Hypothetical p... 52 2e-07
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 31 0.50
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 31 0.50
Z81506-2|CAB04129.1| 257|Caenorhabditis elegans Hypothetical pr... 29 2.7
U46675-3|AAB52643.1| 375|Caenorhabditis elegans Activated in bl... 27 6.2
AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical... 27 8.1
AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical... 27 8.1
>Z46787-10|CAA86749.1| 154|Caenorhabditis elegans Hypothetical
protein C16C10.11 protein.
Length = 154
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/61 (42%), Positives = 34/61 (55%)
Frame = +2
Query: 251 GMFSGGGSSEXXXXXXXXXXXXTYNQYQGQPAQGPCAWEIKQFLECAQQQHDLSLCDGFN 430
GMF+GGGSS Q G PC +E +QF++CAQ Q D+SLC+GFN
Sbjct: 86 GMFTGGGSSHAEQAPAAAAAPAGAPQASGYSQ--PCEFEWRQFVDCAQNQSDVSLCNGFN 143
Query: 431 E 433
+
Sbjct: 144 D 144
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 31.1 bits (67), Expect = 0.50
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 67 TSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGW--WRSCRIGCGSCG 234
TS S + +PA ++ ++ P ++ST+AA + W W +C CGSCG
Sbjct: 2778 TSLSCGTVAPAT-TAATTTTLAPAATTTSTAAASDCSTSTWNAWQEWSTCTETCGSCG 2834
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 31.1 bits (67), Expect = 0.50
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 67 TSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGW--WRSCRIGCGSCG 234
TS S + +PA ++ ++ P ++ST+AA + W W +C CGSCG
Sbjct: 2778 TSLSCGTVAPAT-TAATTTTLAPAATTTSTAAASDCSTSTWNAWQEWSTCTETCGSCG 2834
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 31.1 bits (67), Expect = 0.50
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 67 TSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGW--WRSCRIGCGSCG 234
TS S + +PA ++ ++ P ++ST+AA + W W +C CGSCG
Sbjct: 2778 TSLSCGTVAPAT-TAATTTTLAPAATTTSTAAASDCSTSTWNAWQEWSTCTETCGSCG 2834
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 31.1 bits (67), Expect = 0.50
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 67 TSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGW--WRSCRIGCGSCG 234
TS S + +PA ++ ++ P ++ST+AA + W W +C CGSCG
Sbjct: 2778 TSLSCGTVAPAT-TAATTTTLAPAATTTSTAAASDCSTSTWNAWQEWSTCTETCGSCG 2834
>Z81506-2|CAB04129.1| 257|Caenorhabditis elegans Hypothetical
protein F16H6.3 protein.
Length = 257
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 64 STSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALA 171
+T+ ++ SCS + TS+C S +P DSSS+ AA A
Sbjct: 198 ATTTTQASCSSSGGSTSTCTSYNP--DSSSSCAAWA 231
>U46675-3|AAB52643.1| 375|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 10 protein.
Length = 375
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +2
Query: 320 YNQYQGQPAQGPCAWEIKQ---FLECAQQQHDLSLC 418
Y Q Q PAQ PCA + +Q CA Q D C
Sbjct: 51 YTQVQQAPAQDPCACQPQQQQPACNCAPVQQDPCAC 86
>AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical
protein Y105C5B.21b protein.
Length = 1084
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 276 ASQPSNSKQLLQLKPTINT 332
ASQPS + ++ L+PT NT
Sbjct: 333 ASQPSETSDIIHLRPTCNT 351
>AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical
protein Y105C5B.21a protein.
Length = 1254
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 276 ASQPSNSKQLLQLKPTINT 332
ASQPS + ++ L+PT NT
Sbjct: 503 ASQPSETSDIIHLRPTCNT 521
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,630,566
Number of Sequences: 27780
Number of extensions: 175287
Number of successful extensions: 484
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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