Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324C09f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    26   0.88 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   2.7  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   2.7  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   2.7  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   3.6  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    23   6.2  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   8.2  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.8 bits (54), Expect = 0.88
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -3

Query: 297 GMSPGRSRRAVLTRVSRTARI-YPWTLRVVARIIARILPRVVVPVASTAATD 145
           G    R  R++L RV R A I    T R V R    +LP  +VP+    A D
Sbjct: 811 GALTNRECRSLLKRVQRKAAIRVARTFRTV-RYETAVLPAGLVPICRAVAED 861


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +3

Query: 75  CLYICCWLW 101
           C++ CCW+W
Sbjct: 786 CVWDCCWVW 794


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 358 SCCCDNPSFPGYGCRKTDC 414
           SC C++PS P Y  R  +C
Sbjct: 494 SCPCEHPSDPEYRERADEC 512


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 31/117 (26%), Positives = 44/117 (37%)
 Frame = -2

Query: 394  HSREKKDYRSSRNHGLVYANSNYTLTNHIGGNRDEPRAVPPGRTDPGIPDRSDIPLDLAG 215
            HS  +  Y+ +R      A SN T  N +     +PR  P GR+      +   PL L G
Sbjct: 1236 HSNVRNSYQLTR-----VAPSNRT-NNQLTAQHQDPRG-PQGRSTDYHATQQ--PLPLPG 1286

Query: 214  SCSDNCPDTAQGSSSRSQHRRYRCWAYSC*GHSLLNQPHNQQQMYKQVQEQIFSSPP 44
              S+  P     S  + Q ++               Q   QQQ  +Q Q+Q    PP
Sbjct: 1287 LASEMQPQQLHRSQQQQQQQQ--------------QQQQQQQQQQQQQQQQQQHQPP 1329


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 262 DPGIPDRSDIPLDLAGSCSDNCPDTAQGSSSRSQ 161
           DP + D SD+PLD          +    +SSR++
Sbjct: 701 DPPLEDDSDVPLDFTVGSQGKEAERDAPTSSRNE 734


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 391 YGCRKTDCKFLYANSCEEY 447
           +GCRK    ++Y +  E+Y
Sbjct: 566 FGCRKRSEDYIYEDELEDY 584


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 246 SGIPGSVRPGGTARGSSRLPP 308
           +G  G+V+P  +   SS+LPP
Sbjct: 746 AGTLGAVQPSSSEAVSSKLPP 766


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,910
Number of Sequences: 2352
Number of extensions: 10136
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)