Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324C09f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071419-1|AAL49041.1|  147|Drosophila melanogaster RE49992p pro...    85   5e-17
AE014298-2036|AAF48375.1|  147|Drosophila melanogaster CG12540-P...    85   5e-17
AY118499-1|AAM49868.1|  231|Drosophila melanogaster LD08826p pro...    28   6.7  
AE013599-1170|AAF58754.1|  231|Drosophila melanogaster CG12935-P...    28   6.7  
BT015985-1|AAV36870.1|  738|Drosophila melanogaster RE58108p pro...    28   8.8  
AY089483-1|AAL90221.1|  212|Drosophila melanogaster AT30027p pro...    28   8.8  
AF257463-1|AAG27544.1| 1425|Drosophila melanogaster BRCT-domain ...    28   8.8  
AE014296-1172|AAF50627.1|  212|Drosophila melanogaster CG10063-P...    28   8.8  
AE013599-3292|AAF46773.1|  287|Drosophila melanogaster CG4054-PA...    28   8.8  

>AY071419-1|AAL49041.1|  147|Drosophila melanogaster RE49992p
           protein.
          Length = 147

 Score = 85.0 bits (201), Expect = 5e-17
 Identities = 36/61 (59%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
 Frame = +1

Query: 301 CPLCDSSVYSYCSRKQAHDSCCCD----NPSFPGYGCRKTDCKFLYANSCEEYQLISNCC 468
           CPLCDSSVYSYCS K  HD+CCCD     P      C   DC  LYA SC E+ LI NCC
Sbjct: 83  CPLCDSSVYSYCSHKMVHDACCCDFPGGAPQLRPPQCLYYDCSLLYAKSCYEHALIKNCC 142

Query: 469 C 471
           C
Sbjct: 143 C 143


>AE014298-2036|AAF48375.1|  147|Drosophila melanogaster CG12540-PA
           protein.
          Length = 147

 Score = 85.0 bits (201), Expect = 5e-17
 Identities = 36/61 (59%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
 Frame = +1

Query: 301 CPLCDSSVYSYCSRKQAHDSCCCD----NPSFPGYGCRKTDCKFLYANSCEEYQLISNCC 468
           CPLCDSSVYSYCS K  HD+CCCD     P      C   DC  LYA SC E+ LI NCC
Sbjct: 83  CPLCDSSVYSYCSHKMVHDACCCDFPGGAPQLRPPQCLYYDCSLLYAKSCYEHALIKNCC 142

Query: 469 C 471
           C
Sbjct: 143 C 143


>AY118499-1|AAM49868.1|  231|Drosophila melanogaster LD08826p
           protein.
          Length = 231

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = +1

Query: 19  IKFYKCIKMVDSKIFALVLACTFAVGYGV 105
           +K+++ I + D+K    + AC+F +GYG+
Sbjct: 110 LKWFQRINLGDNKYRNGITACSFLIGYGI 138


>AE013599-1170|AAF58754.1|  231|Drosophila melanogaster CG12935-PA
           protein.
          Length = 231

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = +1

Query: 19  IKFYKCIKMVDSKIFALVLACTFAVGYGV 105
           +K+++ I + D+K    + AC+F +GYG+
Sbjct: 110 LKWFQRINLGDNKYRNGITACSFLIGYGI 138


>BT015985-1|AAV36870.1|  738|Drosophila melanogaster RE58108p
           protein.
          Length = 738

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 261 TRVSRTARIYPWTLRVVARIIARILPRVVVPVASTA 154
           TRV+ T R  PW    +  ++  +L  V++P  +TA
Sbjct: 5   TRVTATTRSRPWLCGAIPVLLLLLLTLVILPPETTA 40


>AY089483-1|AAL90221.1|  212|Drosophila melanogaster AT30027p
           protein.
          Length = 212

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 307 GGNRDEPRAVPPGRTDPGIP 248
           GG  ++P+ VPPG   PG P
Sbjct: 52  GGGDEKPKNVPPGFAAPGFP 71


>AF257463-1|AAG27544.1| 1425|Drosophila melanogaster BRCT-domain
           protein MUS101 protein.
          Length = 1425

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +3

Query: 207 EQLPARSRGISERSGIP-GSVRPGGTARGSS 296
           E  P R++ +SE +GIP GS R  GT+  SS
Sbjct: 852 ELTPLRNKRVSELAGIPGGSARHRGTSSTSS 882


>AE014296-1172|AAF50627.1|  212|Drosophila melanogaster CG10063-PA
           protein.
          Length = 212

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 307 GGNRDEPRAVPPGRTDPGIP 248
           GG  ++P+ VPPG   PG P
Sbjct: 52  GGGDEKPKNVPPGFAAPGFP 71


>AE013599-3292|AAF46773.1|  287|Drosophila melanogaster CG4054-PA
           protein.
          Length = 287

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 261 TRVSRTARIYPWTLRVVARIIARILPRVVVPVASTA 154
           TRV+ T R  PW    +  ++  +L  V++P  +TA
Sbjct: 5   TRVTATTRSRPWLCGAIPVLLLLLLTLVILPPETTA 40


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,545,558
Number of Sequences: 53049
Number of extensions: 478912
Number of successful extensions: 2839
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2823
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)