Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324C09f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    25   0.36 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    24   0.82 
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    22   3.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   7.7  

>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
 Frame = +1

Query: 364 CCDNPSFPGYGCRKTDCKFLYANSCEEYQLISNC-CCVDLQKNSVDTPVVAP 516
           C   P  P Y CR     +L  +  + +Q+  +C CC +  +      +  P
Sbjct: 43  CVPKP-IPSYACRGRCSSYLQVSGSKIWQMERSCMCCQESGEREASVSLFCP 93


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 153 RRCWLRELLPWAVSGQLSEQL 215
           RR WL  LL WA+S  +   +
Sbjct: 301 RRVWLTILLVWAISAAIGSPI 321


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 409 PFCDIHSREKKDYRSSRNHGLVY 341
           P C+I  R      S RNH  +Y
Sbjct: 33  PICNICKRVYSSLNSLRNHKSIY 55


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2

Query: 106  QPHNQQQMYKQVQEQIFSSPP 44
            QP  QQQ  +Q Q Q  S  P
Sbjct: 1504 QPQQQQQQQQQQQPQQQSQQP 1524



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 106 QPHNQQQMYKQVQEQ 62
           QP  QQQ  +Q Q+Q
Sbjct: 840 QPQQQQQQQQQQQQQ 854



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 106  QPHNQQQMYKQVQEQ 62
            QP  QQQ  +Q Q+Q
Sbjct: 1449 QPQQQQQQQQQQQQQ 1463


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 106 QPHNQQQMYKQVQEQ 62
           QP  QQQ  +Q Q+Q
Sbjct: 439 QPQQQQQQQQQQQQQ 453


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,009
Number of Sequences: 438
Number of extensions: 2788
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)