Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS324C03f
(468 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL137800-8|CAC19687.1| 151|Homo sapiens actin related protein 2... 140 2e-33
AF017807-1|AAB70561.1| 151|Homo sapiens Arp2/3 complex 16kDa su... 140 2e-33
AF006088-1|AAB64193.1| 151|Homo sapiens p16-Arc protein. 140 2e-33
AF087842-1|AAP97155.1| 152|Homo sapiens ARC16-2 protein. 139 5e-33
AL137800-7|CAI19481.1| 135|Homo sapiens actin related protein 2... 138 7e-33
BC002418-1|AAH02418.1| 153|Homo sapiens actin related protein 2... 135 8e-32
BC000798-1|AAH00798.1| 153|Homo sapiens actin related protein 2... 135 8e-32
BC000018-1|AAH00018.1| 153|Homo sapiens actin related protein 2... 135 8e-32
AL354928-9|CAI39641.1| 153|Homo sapiens actin related protein 2... 135 8e-32
BC057237-1|AAH57237.1| 154|Homo sapiens ARPC5 protein protein. 132 6e-31
AL137800-9|CAI19482.1| 154|Homo sapiens actin related protein 2... 132 6e-31
BC071857-1|AAH71857.1| 88|Homo sapiens Unknown (protein for MG... 57 3e-08
>AL137800-8|CAC19687.1| 151|Homo sapiens actin related protein 2/3
complex, subunit 5, 16kDa protein.
Length = 151
Score = 140 bits (339), Expect = 2e-33
Identities = 69/132 (52%), Positives = 93/132 (70%), Gaps = 1/132 (0%)
Frame = +2
Query: 71 MAKNTLSSA-FRKIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQGRHIDALKLVLN 247
M+KNT+SSA FRK+D+D+Y+E+ F ++E G GPDEGEV S L QG AL+ L
Sbjct: 1 MSKNTVSSARFRKVDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLRQGNMTAALQAALK 60
Query: 248 NAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFPSEG 427
N P+ + +Q VK+ A ++ LKVL++ K+ IE+AV SL + +D LMKYIYKGFE PS+
Sbjct: 61 NPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDKNGVDLLMKYIYKGFESPSDN 120
Query: 428 SSGHLLXWHDKA 463
SS LL WH+KA
Sbjct: 121 SSAMLLQWHEKA 132
>AF017807-1|AAB70561.1| 151|Homo sapiens Arp2/3 complex 16kDa
subunit protein.
Length = 151
Score = 140 bits (339), Expect = 2e-33
Identities = 69/132 (52%), Positives = 93/132 (70%), Gaps = 1/132 (0%)
Frame = +2
Query: 71 MAKNTLSSA-FRKIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQGRHIDALKLVLN 247
M+KNT+SSA FRK+D+D+Y+E+ F ++E G GPDEGEV S L QG AL+ L
Sbjct: 1 MSKNTVSSARFRKVDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLRQGNMTAALQAALK 60
Query: 248 NAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFPSEG 427
N P+ + +Q VK+ A ++ LKVL++ K+ IE+AV SL + +D LMKYIYKGFE PS+
Sbjct: 61 NPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDKNGVDLLMKYIYKGFESPSDN 120
Query: 428 SSGHLLXWHDKA 463
SS LL WH+KA
Sbjct: 121 SSAMLLQWHEKA 132
>AF006088-1|AAB64193.1| 151|Homo sapiens p16-Arc protein.
Length = 151
Score = 140 bits (339), Expect = 2e-33
Identities = 69/132 (52%), Positives = 93/132 (70%), Gaps = 1/132 (0%)
Frame = +2
Query: 71 MAKNTLSSA-FRKIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQGRHIDALKLVLN 247
M+KNT+SSA FRK+D+D+Y+E+ F ++E G GPDEGEV S L QG AL+ L
Sbjct: 1 MSKNTVSSARFRKVDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLRQGNMTAALQAALK 60
Query: 248 NAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFPSEG 427
N P+ + +Q VK+ A ++ LKVL++ K+ IE+AV SL + +D LMKYIYKGFE PS+
Sbjct: 61 NPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDKNGVDLLMKYIYKGFESPSDN 120
Query: 428 SSGHLLXWHDKA 463
SS LL WH+KA
Sbjct: 121 SSAMLLQWHEKA 132
>AF087842-1|AAP97155.1| 152|Homo sapiens ARC16-2 protein.
Length = 152
Score = 139 bits (336), Expect = 5e-33
Identities = 70/133 (52%), Positives = 92/133 (69%), Gaps = 2/133 (1%)
Frame = +2
Query: 71 MAKNTLSSAFRKIDIDQYNEDNF--KEDEAEQAGPTGPDEGEVCSLLNQGRHIDALKLVL 244
MA+NTLSS FR++DID+++E+ F +++EA A TGPD EV LL QG + A L
Sbjct: 1 MARNTLSSRFRRVDIDEFDENKFVDEQEEAAAAARTGPDPSEVDGLLRQGDMLRAFHAAL 60
Query: 245 NNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFPSE 424
N+P+ + NQ VKE A + LKVL KS++IE+AV SL + +D LMKYIYKGFE P+E
Sbjct: 61 RNSPVNTKNQAVKERAQGVVLKVLTNFKSSEIEQAVQSLDRNGVDLLMKYIYKGFEKPTE 120
Query: 425 GSSGHLLXWHDKA 463
SS LL WH+KA
Sbjct: 121 NSSAVLLQWHEKA 133
>AL137800-7|CAI19481.1| 135|Homo sapiens actin related protein 2/3
complex, subunit 5, 16kDa protein.
Length = 135
Score = 138 bits (335), Expect = 7e-33
Identities = 68/131 (51%), Positives = 92/131 (70%), Gaps = 1/131 (0%)
Frame = +2
Query: 71 MAKNTLSSA-FRKIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQGRHIDALKLVLN 247
M+KNT+SSA FRK+D+D+Y+E+ F ++E G GPDEGEV S L QG AL+ L
Sbjct: 1 MSKNTVSSARFRKVDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLRQGNMTAALQAALK 60
Query: 248 NAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFPSEG 427
N P+ + +Q VK+ A ++ LKVL++ K+ IE+AV SL + +D LMKYIYKGFE PS+
Sbjct: 61 NPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDKNGVDLLMKYIYKGFESPSDN 120
Query: 428 SSGHLLXWHDK 460
SS LL WH+K
Sbjct: 121 SSAMLLQWHEK 131
>BC002418-1|AAH02418.1| 153|Homo sapiens actin related protein 2/3
complex, subunit 5-like protein.
Length = 153
Score = 135 bits (326), Expect = 8e-32
Identities = 69/134 (51%), Positives = 90/134 (67%), Gaps = 3/134 (2%)
Frame = +2
Query: 71 MAKNTLSSAFRKIDIDQYNEDNF---KEDEAEQAGPTGPDEGEVCSLLNQGRHIDALKLV 241
MA+NTLSS FR++DID+++E+ F +E+ A A GPD EV LL QG + A
Sbjct: 1 MARNTLSSRFRRVDIDEFDENKFVDEQEEAAAAAAEPGPDPSEVDGLLRQGDMLRAFHAA 60
Query: 242 LNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFPS 421
L N+P+ + NQ VKE A + LKVL KS++IE+AV SL + +D LMKYIYKGFE P+
Sbjct: 61 LRNSPVNTKNQAVKERAQGVVLKVLTNFKSSEIEQAVQSLDRNGVDLLMKYIYKGFEKPT 120
Query: 422 EGSSGHLLXWHDKA 463
E SS LL WH+KA
Sbjct: 121 ENSSAVLLQWHEKA 134
>BC000798-1|AAH00798.1| 153|Homo sapiens actin related protein 2/3
complex, subunit 5-like protein.
Length = 153
Score = 135 bits (326), Expect = 8e-32
Identities = 69/134 (51%), Positives = 90/134 (67%), Gaps = 3/134 (2%)
Frame = +2
Query: 71 MAKNTLSSAFRKIDIDQYNEDNF---KEDEAEQAGPTGPDEGEVCSLLNQGRHIDALKLV 241
MA+NTLSS FR++DID+++E+ F +E+ A A GPD EV LL QG + A
Sbjct: 1 MARNTLSSRFRRVDIDEFDENKFVDEQEEAAAAAAEPGPDPSEVDGLLRQGDMLRAFHAA 60
Query: 242 LNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFPS 421
L N+P+ + NQ VKE A + LKVL KS++IE+AV SL + +D LMKYIYKGFE P+
Sbjct: 61 LRNSPVNTKNQAVKERAQGVVLKVLTNFKSSEIEQAVQSLDRNGVDLLMKYIYKGFEKPT 120
Query: 422 EGSSGHLLXWHDKA 463
E SS LL WH+KA
Sbjct: 121 ENSSAVLLQWHEKA 134
>BC000018-1|AAH00018.1| 153|Homo sapiens actin related protein 2/3
complex, subunit 5-like protein.
Length = 153
Score = 135 bits (326), Expect = 8e-32
Identities = 69/134 (51%), Positives = 90/134 (67%), Gaps = 3/134 (2%)
Frame = +2
Query: 71 MAKNTLSSAFRKIDIDQYNEDNF---KEDEAEQAGPTGPDEGEVCSLLNQGRHIDALKLV 241
MA+NTLSS FR++DID+++E+ F +E+ A A GPD EV LL QG + A
Sbjct: 1 MARNTLSSRFRRVDIDEFDENKFVDEQEEAAAAAAEPGPDPSEVDGLLRQGDMLRAFHAA 60
Query: 242 LNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFPS 421
L N+P+ + NQ VKE A + LKVL KS++IE+AV SL + +D LMKYIYKGFE P+
Sbjct: 61 LRNSPVNTKNQAVKERAQGVVLKVLTNFKSSEIEQAVQSLDRNGVDLLMKYIYKGFEKPT 120
Query: 422 EGSSGHLLXWHDKA 463
E SS LL WH+KA
Sbjct: 121 ENSSAVLLQWHEKA 134
>AL354928-9|CAI39641.1| 153|Homo sapiens actin related protein 2/3
complex, subunit 5-like protein.
Length = 153
Score = 135 bits (326), Expect = 8e-32
Identities = 69/134 (51%), Positives = 90/134 (67%), Gaps = 3/134 (2%)
Frame = +2
Query: 71 MAKNTLSSAFRKIDIDQYNEDNF---KEDEAEQAGPTGPDEGEVCSLLNQGRHIDALKLV 241
MA+NTLSS FR++DID+++E+ F +E+ A A GPD EV LL QG + A
Sbjct: 1 MARNTLSSRFRRVDIDEFDENKFVDEQEEAAAAAAEPGPDPSEVDGLLRQGDMLRAFHAA 60
Query: 242 LNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFPS 421
L N+P+ + NQ VKE A + LKVL KS++IE+AV SL + +D LMKYIYKGFE P+
Sbjct: 61 LRNSPVNTKNQAVKERAQGVVLKVLTNFKSSEIEQAVQSLDRNGVDLLMKYIYKGFEKPT 120
Query: 422 EGSSGHLLXWHDKA 463
E SS LL WH+KA
Sbjct: 121 ENSSAVLLQWHEKA 134
>BC057237-1|AAH57237.1| 154|Homo sapiens ARPC5 protein protein.
Length = 154
Score = 132 bits (319), Expect = 6e-31
Identities = 68/135 (50%), Positives = 92/135 (68%), Gaps = 4/135 (2%)
Frame = +2
Query: 71 MAKNTLSSA-FRKIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQ---GRHIDALKL 238
M+KNT+SSA FRK+D+D+Y+E+ F ++E G GPDEGEV S L G AL+
Sbjct: 1 MSKNTVSSARFRKVDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLRHSITGNMTAALQA 60
Query: 239 VLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFP 418
L N P+ + +Q VK+ A ++ LKVL++ K+ IE+AV SL + +D LMKYIYKGFE P
Sbjct: 61 ALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDKNGVDLLMKYIYKGFESP 120
Query: 419 SEGSSGHLLXWHDKA 463
S+ SS LL WH+KA
Sbjct: 121 SDNSSAMLLQWHEKA 135
>AL137800-9|CAI19482.1| 154|Homo sapiens actin related protein 2/3
complex, subunit 5, 16kDa protein.
Length = 154
Score = 132 bits (319), Expect = 6e-31
Identities = 68/135 (50%), Positives = 92/135 (68%), Gaps = 4/135 (2%)
Frame = +2
Query: 71 MAKNTLSSA-FRKIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQ---GRHIDALKL 238
M+KNT+SSA FRK+D+D+Y+E+ F ++E G GPDEGEV S L G AL+
Sbjct: 1 MSKNTVSSARFRKVDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLRHSITGNMTAALQA 60
Query: 239 VLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFP 418
L N P+ + +Q VK+ A ++ LKVL++ K+ IE+AV SL + +D LMKYIYKGFE P
Sbjct: 61 ALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDKNGVDLLMKYIYKGFESP 120
Query: 419 SEGSSGHLLXWHDKA 463
S+ SS LL WH+KA
Sbjct: 121 SDNSSAMLLQWHEKA 135
>BC071857-1|AAH71857.1| 88|Homo sapiens Unknown (protein for
MGC:88523) protein.
Length = 88
Score = 57.2 bits (132), Expect = 3e-08
Identities = 27/48 (56%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = +2
Query: 71 MAKNTLSSA-FRKIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQ 211
M+KNT+SSA FRK+D+D+Y+E+ F ++E G GPDEGEV S L Q
Sbjct: 1 MSKNTVSSARFRKVDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLRQ 48
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,462,235
Number of Sequences: 237096
Number of extensions: 950531
Number of successful extensions: 2201
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2185
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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