Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS324C03f
(468 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089678-1|AAL90416.1| 151|Drosophila melanogaster RH48239p pro... 178 3e-45
AE014134-433|AAF51237.1| 151|Drosophila melanogaster CG9881-PA ... 178 3e-45
AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC... 28 5.5
AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB... 28 5.5
S61883-1|AAB26991.2| 2068|Drosophila melanogaster transcription ... 28 7.2
BT024196-1|ABC86258.1| 1964|Drosophila melanogaster RE63802p pro... 28 7.2
BT004888-1|AAO47866.1| 2096|Drosophila melanogaster RE74933p pro... 28 7.2
AE014297-491|AAF54102.3| 2065|Drosophila melanogaster CG17603-PA... 28 7.2
AE001572-25|AAD19815.1| 2065|Drosophila melanogaster transcripti... 28 7.2
>AY089678-1|AAL90416.1| 151|Drosophila melanogaster RH48239p
protein.
Length = 151
Score = 178 bits (433), Expect = 3e-45
Identities = 81/133 (60%), Positives = 106/133 (79%), Gaps = 1/133 (0%)
Frame = +2
Query: 71 MAKNTLSSAFRKIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQGRHIDALKLVLNN 250
MAKNT S+AFRKID+DQYNEDNF+ED+ ++ GPDE E+ +LL QG+ ++AL L N
Sbjct: 1 MAKNTSSNAFRKIDVDQYNEDNFREDDGVESAAAGPDESEITTLLTQGKSVEALLSALQN 60
Query: 251 APLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDD-IDNLMKYIYKGFEFPSEG 427
APL NQ VK++AL +TL+VLL+IKS Q+++A+ +L +D ID LMKYIY+GFE PSEG
Sbjct: 61 APLRCKNQNVKDHALNITLRVLLSIKSTQMDQAIDTLDQNDLIDVLMKYIYRGFEIPSEG 120
Query: 428 SSGHLLXWHDKAY 466
SSGHLL WH+KA+
Sbjct: 121 SSGHLLQWHEKAF 133
>AE014134-433|AAF51237.1| 151|Drosophila melanogaster CG9881-PA
protein.
Length = 151
Score = 178 bits (433), Expect = 3e-45
Identities = 81/133 (60%), Positives = 106/133 (79%), Gaps = 1/133 (0%)
Frame = +2
Query: 71 MAKNTLSSAFRKIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQGRHIDALKLVLNN 250
MAKNT S+AFRKID+DQYNEDNF+ED+ ++ GPDE E+ +LL QG+ ++AL L N
Sbjct: 1 MAKNTSSNAFRKIDVDQYNEDNFREDDGVESAAAGPDESEITTLLTQGKSVEALLSALQN 60
Query: 251 APLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDD-IDNLMKYIYKGFEFPSEG 427
APL NQ VK++AL +TL+VLL+IKS Q+++A+ +L +D ID LMKYIY+GFE PSEG
Sbjct: 61 APLRCKNQNVKDHALNITLRVLLSIKSTQMDQAIDTLDQNDLIDVLMKYIYRGFEIPSEG 120
Query: 428 SSGHLLXWHDKAY 466
SSGHLL WH+KA+
Sbjct: 121 SSGHLLQWHEKAF 133
>AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC,
isoform C protein.
Length = 2098
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 71 MAKNTLSSAFRKIDID-QYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQGRHIDA 229
+A N + +D D Q + D+ +DE E DE S+L+QG I+A
Sbjct: 1824 LASNMSHTQAYFLDEDLQCSTDDEDDDEEEDFQEVSEDENNAASILDQGERINA 1877
>AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB,
isoform B protein.
Length = 2129
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 71 MAKNTLSSAFRKIDID-QYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQGRHIDA 229
+A N + +D D Q + D+ +DE E DE S+L+QG I+A
Sbjct: 1824 LASNMSHTQAYFLDEDLQCSTDDEDDDEEEDFQEVSEDENNAASILDQGERINA 1877
>S61883-1|AAB26991.2| 2068|Drosophila melanogaster transcription
factor TFIID 230kda subunit protein.
Length = 2068
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 119 QYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQGRHIDA 229
Q + D+ +DE E DE S+L+QG I+A
Sbjct: 1811 QCSTDDEDDDEEEDFQEVSEDENNAASILDQGERINA 1847
>BT024196-1|ABC86258.1| 1964|Drosophila melanogaster RE63802p protein.
Length = 1964
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 119 QYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQGRHIDA 229
Q + D+ +DE E DE S+L+QG I+A
Sbjct: 1808 QCSTDDEDDDEEEDFQEVSEDENNAASILDQGERINA 1844
>BT004888-1|AAO47866.1| 2096|Drosophila melanogaster RE74933p protein.
Length = 2096
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 119 QYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQGRHIDA 229
Q + D+ +DE E DE S+L+QG I+A
Sbjct: 1808 QCSTDDEDDDEEEDFQEVSEDENNAASILDQGERINA 1844
>AE014297-491|AAF54102.3| 2065|Drosophila melanogaster CG17603-PA,
isoform A protein.
Length = 2065
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 119 QYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQGRHIDA 229
Q + D+ +DE E DE S+L+QG I+A
Sbjct: 1808 QCSTDDEDDDEEEDFQEVSEDENNAASILDQGERINA 1844
>AE001572-25|AAD19815.1| 2065|Drosophila melanogaster transcription
factor protein.
Length = 2065
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 119 QYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQGRHIDA 229
Q + D+ +DE E DE S+L+QG I+A
Sbjct: 1808 QCSTDDEDDDEEEDFQEVSEDENNAASILDQGERINA 1844
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,377,816
Number of Sequences: 53049
Number of extensions: 296836
Number of successful extensions: 739
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1580609772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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