Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS324C03f
(468 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067624-1|AAC17561.1| 152|Caenorhabditis elegans Arp2/3 comple... 95 2e-20
U88314-5|AAF99882.1| 146|Caenorhabditis elegans Hypothetical pr... 79 2e-15
Z38016-1|CAA86114.1| 856|Caenorhabditis elegans serine/threonin... 29 1.3
AL117207-1|CAB60406.1| 856|Caenorhabditis elegans Hypothetical ... 29 1.3
Z73911-2|CAC42338.2| 402|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z68880-9|CAA93099.1| 255|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z68879-12|CAA93091.1| 255|Caenorhabditis elegans Hypothetical p... 28 3.8
Z81481-1|CAB03947.1| 404|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical pr... 27 6.7
AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical ... 27 6.7
Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical pr... 27 8.9
U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein. 27 8.9
>AF067624-1|AAC17561.1| 152|Caenorhabditis elegans Arp2/3 complex
component protein 7 protein.
Length = 152
Score = 95.1 bits (226), Expect = 2e-20
Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 2/130 (1%)
Frame = +2
Query: 71 MAKNTLSSAFRKIDIDQYNEDNFKE-DEAEQAGPTGPDEGEVCSLLNQGRHIDALKLVLN 247
M+KN ++++RK+D+D ++ + + E DE GPDE V L+ R DAL L
Sbjct: 1 MSKNMQNTSYRKLDVDSFDPEQYDENDETVDTPGLGPDERAVQGFLSSNRLEDALHAALL 60
Query: 248 NAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFPSEG 427
+ PL + +Q VK+ A L KVL + K+A+IE V LS+++ D LMKY+YK E ++
Sbjct: 61 SPPLKTKDQNVKDRATQLVTKVLQSFKNAEIEATVQKLSIEESDILMKYVYKSMEIGADA 120
Query: 428 S-SGHLLXWH 454
+ LL WH
Sbjct: 121 AVCQSLLAWH 130
>U88314-5|AAF99882.1| 146|Caenorhabditis elegans Hypothetical
protein C46H11.3 protein.
Length = 146
Score = 78.6 bits (185), Expect = 2e-15
Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Frame = +2
Query: 98 FRKIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQGRHIDALKLVLNNAPLGSSNQQ 277
++K ++D ++ +F ED E++ GP+ EV L R AL+ VL N P G S Q+
Sbjct: 6 YKKYNVDIFHPAHF-EDIQEESADCGPNVQEVRQFLESNRLEYALQSVLLNPPFGHSEQE 64
Query: 278 VKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFPSEGSSG-HLLXWH 454
+K A+ L +V+ A + IEE+V LS ++ D LMKYIYK + S+ ++ LL WH
Sbjct: 65 LKNRAVLLVAEVIHAFRQTDIEESVHKLSNENGDILMKYIYKAMQLCSDSATCLSLLLWH 124
Query: 455 DK 460
+
Sbjct: 125 SQ 126
>Z38016-1|CAA86114.1| 856|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 856
Score = 29.5 bits (63), Expect = 1.3
Identities = 18/77 (23%), Positives = 36/77 (46%)
Frame = +2
Query: 197 SLLNQGRHIDALKLVLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDI 376
+++ +GR++D + + + N +N LT +K+L + S + E VG L +
Sbjct: 21 AIVYRGRYVDRTDVPVAIKAIAKKNISKSKNLLTKEIKILKELSSLKHENLVGLLKCTET 80
Query: 377 DNLMKYIYKGFEFPSEG 427
++Y EF + G
Sbjct: 81 PT---HVYLVMEFCNGG 94
>AL117207-1|CAB60406.1| 856|Caenorhabditis elegans Hypothetical
protein Y60A3A.1 protein.
Length = 856
Score = 29.5 bits (63), Expect = 1.3
Identities = 18/77 (23%), Positives = 36/77 (46%)
Frame = +2
Query: 197 SLLNQGRHIDALKLVLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDI 376
+++ +GR++D + + + N +N LT +K+L + S + E VG L +
Sbjct: 21 AIVYRGRYVDRTDVPVAIKAIAKKNISKSKNLLTKEIKILKELSSLKHENLVGLLKCTET 80
Query: 377 DNLMKYIYKGFEFPSEG 427
++Y EF + G
Sbjct: 81 PT---HVYLVMEFCNGG 94
>Z73911-2|CAC42338.2| 402|Caenorhabditis elegans Hypothetical
protein T12A7.6 protein.
Length = 402
Score = 28.7 bits (61), Expect = 2.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 366 KDKLPTASSICADLIASNTFKVRV 295
KDK+PT S IC+ I ++ F+ R+
Sbjct: 28 KDKVPTLSEICSSSITTSLFQNRI 51
>Z68880-9|CAA93099.1| 255|Caenorhabditis elegans Hypothetical
protein K08F4.9 protein.
Length = 255
Score = 27.9 bits (59), Expect = 3.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 137 SCLHCIDLCLFSGMLSLKYFLP 72
S LHCID+ S +L+ ++FLP
Sbjct: 107 SVLHCIDVNAVSALLASQHFLP 128
>Z68879-12|CAA93091.1| 255|Caenorhabditis elegans Hypothetical
protein K08F4.9 protein.
Length = 255
Score = 27.9 bits (59), Expect = 3.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 137 SCLHCIDLCLFSGMLSLKYFLP 72
S LHCID+ S +L+ ++FLP
Sbjct: 107 SVLHCIDVNAVSALLASQHFLP 128
>Z81481-1|CAB03947.1| 404|Caenorhabditis elegans Hypothetical
protein C38D9.1 protein.
Length = 404
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +2
Query: 269 NQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKY 394
++Q++EN L VL ++ ++ + V L ++ID ++ Y
Sbjct: 228 SEQIRENIFNDVLNVLRSMNKLRVRKLVCELKNEEIDAILPY 269
>Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 27.1 bits (57), Expect = 6.7
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 65 TIMAKNTLSSAFRKIDIDQYNEDNFKEDE--AEQAGPTGPDEGE 190
T MAK + +S RKI ID +ED+F DE +E+ G ++ E
Sbjct: 171 TQMAKRSAASK-RKIVIDDESEDDFINDEEISEKGSGKGSEKEE 213
>AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 27.1 bits (57), Expect = 6.7
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 65 TIMAKNTLSSAFRKIDIDQYNEDNFKEDE--AEQAGPTGPDEGE 190
T MAK + +S RKI ID +ED+F DE +E+ G ++ E
Sbjct: 171 TQMAKRSAASK-RKIVIDDESEDDFINDEEISEKGSGKGSEKEE 213
>Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical
protein C25G4.5 protein.
Length = 1263
Score = 26.6 bits (56), Expect = 8.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 80 NTLSSAFRKIDIDQYNEDNFKEDEAEQAG 166
N + A ++D N+ N+KEDE AG
Sbjct: 167 NNMDDALTTTELDADNDKNWKEDEENIAG 195
>U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein.
Length = 1263
Score = 26.6 bits (56), Expect = 8.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 80 NTLSSAFRKIDIDQYNEDNFKEDEAEQAG 166
N + A ++D N+ N+KEDE AG
Sbjct: 167 NNMDDALTTTELDADNDKNWKEDEENIAG 195
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,098,039
Number of Sequences: 27780
Number of extensions: 161083
Number of successful extensions: 420
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 419
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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