Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS324C02f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC113605-1|AAI13606.1| 1063|Homo sapiens valyl-tRNA synthetase 2... 34 0.35
BC112054-1|AAI12055.1| 1063|Homo sapiens valyl-tRNA synthetase 2... 34 0.35
BC073838-1|AAH73838.1| 657|Homo sapiens VARS2 protein protein. 34 0.35
BC009355-1|AAH09355.2| 733|Homo sapiens VARS2 protein protein. 34 0.35
AL773541-5|CAI18453.1| 1063|Homo sapiens valyl-tRNA synthetase 2... 34 0.35
AL773541-4|CAI18454.1| 993|Homo sapiens valyl-tRNA synthetase 2... 34 0.35
AL669830-5|CAI18004.1| 1063|Homo sapiens valyl-tRNA synthetase l... 34 0.35
AL662854-14|CAI17437.1| 1063|Homo sapiens valyl-tRNA synthetase ... 34 0.35
AK025618-1|BAB15191.1| 642|Homo sapiens protein ( Homo sapiens ... 34 0.35
AB209479-1|BAD92716.1| 1653|Homo sapiens VARS2L protein variant ... 34 0.35
AB067472-1|BAB67778.1| 1098|Homo sapiens KIAA1885 protein protein. 34 0.35
Z82216-2|CAI43051.1| 595|Homo sapiens premature ovarian failure... 29 7.5
Z82216-1|CAI43050.1| 589|Homo sapiens premature ovarian failure... 29 7.5
BC017500-1|AAH17500.1| 595|Homo sapiens POF1B protein protein. 29 7.5
AL117325-2|CAI42101.1| 595|Homo sapiens premature ovarian failu... 29 7.5
AL117325-1|CAI42100.1| 589|Homo sapiens premature ovarian failu... 29 7.5
AK025039-1|BAB15055.1| 306|Homo sapiens protein ( Homo sapiens ... 29 7.5
AF309774-1|AAM93270.1| 589|Homo sapiens premature ovarian failu... 29 7.5
>BC113605-1|AAI13606.1| 1063|Homo sapiens valyl-tRNA synthetase 2,
mitochondrial (putative) protein.
Length = 1063
Score = 33.9 bits (74), Expect = 0.35
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 333 KNWIPYRNWFSHSGEWCTNAQTKCLLTILLYVILSTH 443
KNW ++WFSH G+WC + Q I Y+++ H
Sbjct: 509 KNW---QHWFSHIGDWCVSRQLWWGHQIPAYLVVEDH 542
>BC112054-1|AAI12055.1| 1063|Homo sapiens valyl-tRNA synthetase 2,
mitochondrial (putative) protein.
Length = 1063
Score = 33.9 bits (74), Expect = 0.35
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 333 KNWIPYRNWFSHSGEWCTNAQTKCLLTILLYVILSTH 443
KNW ++WFSH G+WC + Q I Y+++ H
Sbjct: 509 KNW---QHWFSHIGDWCVSRQLWWGHQIPAYLVVEDH 542
>BC073838-1|AAH73838.1| 657|Homo sapiens VARS2 protein protein.
Length = 657
Score = 33.9 bits (74), Expect = 0.35
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 333 KNWIPYRNWFSHSGEWCTNAQTKCLLTILLYVILSTH 443
KNW ++WFSH G+WC + Q I Y+++ H
Sbjct: 103 KNW---QHWFSHIGDWCVSRQLWWGHQIPAYLVVEDH 136
>BC009355-1|AAH09355.2| 733|Homo sapiens VARS2 protein protein.
Length = 733
Score = 33.9 bits (74), Expect = 0.35
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 333 KNWIPYRNWFSHSGEWCTNAQTKCLLTILLYVILSTH 443
KNW ++WFSH G+WC + Q I Y+++ H
Sbjct: 179 KNW---QHWFSHIGDWCVSRQLWWGHQIPAYLVVEDH 212
>AL773541-5|CAI18453.1| 1063|Homo sapiens valyl-tRNA synthetase
2-like protein.
Length = 1063
Score = 33.9 bits (74), Expect = 0.35
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 333 KNWIPYRNWFSHSGEWCTNAQTKCLLTILLYVILSTH 443
KNW ++WFSH G+WC + Q I Y+++ H
Sbjct: 509 KNW---QHWFSHIGDWCVSRQLWWGHQIPAYLVVEDH 542
>AL773541-4|CAI18454.1| 993|Homo sapiens valyl-tRNA synthetase
2-like protein.
Length = 993
Score = 33.9 bits (74), Expect = 0.35
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 333 KNWIPYRNWFSHSGEWCTNAQTKCLLTILLYVILSTH 443
KNW ++WFSH G+WC + Q I Y+++ H
Sbjct: 439 KNW---QHWFSHIGDWCVSRQLWWGHQIPAYLVVEDH 472
>AL669830-5|CAI18004.1| 1063|Homo sapiens valyl-tRNA synthetase like
protein.
Length = 1063
Score = 33.9 bits (74), Expect = 0.35
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 333 KNWIPYRNWFSHSGEWCTNAQTKCLLTILLYVILSTH 443
KNW ++WFSH G+WC + Q I Y+++ H
Sbjct: 509 KNW---QHWFSHIGDWCVSRQLWWGHQIPAYLVVEDH 542
>AL662854-14|CAI17437.1| 1063|Homo sapiens valyl-tRNA synthetase
like protein.
Length = 1063
Score = 33.9 bits (74), Expect = 0.35
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 333 KNWIPYRNWFSHSGEWCTNAQTKCLLTILLYVILSTH 443
KNW ++WFSH G+WC + Q I Y+++ H
Sbjct: 509 KNW---QHWFSHIGDWCVSRQLWWGHQIPAYLVVEDH 542
>AK025618-1|BAB15191.1| 642|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21965 fis, clone HEP05617. ).
Length = 642
Score = 33.9 bits (74), Expect = 0.35
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 333 KNWIPYRNWFSHSGEWCTNAQTKCLLTILLYVILSTH 443
KNW ++WFSH G+WC + Q I Y+++ H
Sbjct: 88 KNW---QHWFSHIGDWCVSRQLWWGHQIPAYLVVEDH 121
>AB209479-1|BAD92716.1| 1653|Homo sapiens VARS2L protein variant
protein.
Length = 1653
Score = 33.9 bits (74), Expect = 0.35
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 333 KNWIPYRNWFSHSGEWCTNAQTKCLLTILLYVILSTH 443
KNW ++WFSH G+WC + Q I Y+++ H
Sbjct: 1099 KNW---QHWFSHIGDWCVSRQLWWGHQIPAYLVVEDH 1132
>AB067472-1|BAB67778.1| 1098|Homo sapiens KIAA1885 protein protein.
Length = 1098
Score = 33.9 bits (74), Expect = 0.35
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 333 KNWIPYRNWFSHSGEWCTNAQTKCLLTILLYVILSTH 443
KNW ++WFSH G+WC + Q I Y+++ H
Sbjct: 544 KNW---QHWFSHIGDWCVSRQLWWGHQIPAYLVVEDH 577
>Z82216-2|CAI43051.1| 595|Homo sapiens premature ovarian failure,
1B protein.
Length = 595
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = -2
Query: 496 ATFTFKLFQNTLQILHGKCVERITYNKIVNRHFVCAFVHHSPEWLNQFR*GIQFF 332
A T + QNT Q LH V+ TY + R +V P L+QF G FF
Sbjct: 107 APSTLHITQNTEQELHSPTVKLTTYPQTTIRKYVVQNPEQEP--LSQFLRGSHFF 159
>Z82216-1|CAI43050.1| 589|Homo sapiens premature ovarian failure,
1B protein.
Length = 589
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = -2
Query: 496 ATFTFKLFQNTLQILHGKCVERITYNKIVNRHFVCAFVHHSPEWLNQFR*GIQFF 332
A T + QNT Q LH V+ TY + R +V P L+QF G FF
Sbjct: 107 APSTLHITQNTEQELHSPTVKLTTYPQTTIRKYVVQNPEQEP--LSQFLRGSHFF 159
>BC017500-1|AAH17500.1| 595|Homo sapiens POF1B protein protein.
Length = 595
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = -2
Query: 496 ATFTFKLFQNTLQILHGKCVERITYNKIVNRHFVCAFVHHSPEWLNQFR*GIQFF 332
A T + QNT Q LH V+ TY + R +V P L+QF G FF
Sbjct: 107 APSTLHITQNTEQELHSPTVKLTTYPQTTIRKYVVQNPEQEP--LSQFLRGSHFF 159
>AL117325-2|CAI42101.1| 595|Homo sapiens premature ovarian failure,
1B protein.
Length = 595
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = -2
Query: 496 ATFTFKLFQNTLQILHGKCVERITYNKIVNRHFVCAFVHHSPEWLNQFR*GIQFF 332
A T + QNT Q LH V+ TY + R +V P L+QF G FF
Sbjct: 107 APSTLHITQNTEQELHSPTVKLTTYPQTTIRKYVVQNPEQEP--LSQFLRGSHFF 159
>AL117325-1|CAI42100.1| 589|Homo sapiens premature ovarian failure,
1B protein.
Length = 589
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = -2
Query: 496 ATFTFKLFQNTLQILHGKCVERITYNKIVNRHFVCAFVHHSPEWLNQFR*GIQFF 332
A T + QNT Q LH V+ TY + R +V P L+QF G FF
Sbjct: 107 APSTLHITQNTEQELHSPTVKLTTYPQTTIRKYVVQNPEQEP--LSQFLRGSHFF 159
>AK025039-1|BAB15055.1| 306|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21386 fis, clone COL03414. ).
Length = 306
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = -2
Query: 496 ATFTFKLFQNTLQILHGKCVERITYNKIVNRHFVCAFVHHSPEWLNQFR*GIQFF 332
A T + QNT Q LH V+ TY + R +V P L+QF G FF
Sbjct: 107 APSTLHITQNTEQELHSPTVKLTTYPQTTIRKYVVQNPEQEP--LSQFLRGSHFF 159
>AF309774-1|AAM93270.1| 589|Homo sapiens premature ovarian failure
1B protein protein.
Length = 589
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = -2
Query: 496 ATFTFKLFQNTLQILHGKCVERITYNKIVNRHFVCAFVHHSPEWLNQFR*GIQFF 332
A T + QNT Q LH V+ TY + R +V P L+QF G FF
Sbjct: 107 APSTLHITQNTEQELHSPTVKLTTYPQTTIRKYVVQNPEQEP--LSQFLRGSHFF 159
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,997,149
Number of Sequences: 237096
Number of extensions: 1501450
Number of successful extensions: 5987
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5987
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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