Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324C01f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063489-1|AAH63489.1|  301|Homo sapiens transmembrane and ubiqu...    54   3e-07
AY358780-1|AAQ89140.1|  301|Homo sapiens ELSD1897 protein.             54   3e-07
AJ269529-1|CAB87248.1|  533|Homo sapiens glycerol 3-phosphate pe...    29   9.9  
AF311320-1|AAG29853.1|  533|Homo sapiens glycerol 3-phosphate pe...    29   9.9  

>BC063489-1|AAH63489.1|  301|Homo sapiens transmembrane and
           ubiquitin-like domain containing 2 protein.
          Length = 301

 Score = 54.0 bits (124), Expect = 3e-07
 Identities = 23/56 (41%), Positives = 36/56 (64%)
 Frame = +3

Query: 48  PERSWDLENILMTFVSVALTVVWFFRCEYSNMFTASASVALFGLTVFYSVAIFGLY 215
           P    ++ ++++    V L VVW+FR  Y   FTA A+V+L G+TVF+S  +FG+Y
Sbjct: 244 PSLGVNVGSLMVPVFVVLLGVVWYFRINYRQFFTAPATVSLVGVTVFFSFLVFGMY 299


>AY358780-1|AAQ89140.1|  301|Homo sapiens ELSD1897 protein.
          Length = 301

 Score = 54.0 bits (124), Expect = 3e-07
 Identities = 23/56 (41%), Positives = 36/56 (64%)
 Frame = +3

Query: 48  PERSWDLENILMTFVSVALTVVWFFRCEYSNMFTASASVALFGLTVFYSVAIFGLY 215
           P    ++ ++++    V L VVW+FR  Y   FTA A+V+L G+TVF+S  +FG+Y
Sbjct: 244 PSLGVNVGSLMVPVFVVLLGVVWYFRINYRQFFTAPATVSLVGVTVFFSFLVFGMY 299


>AJ269529-1|CAB87248.1|  533|Homo sapiens glycerol 3-phosphate
           permease protein.
          Length = 533

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 141 MFTASASVALFGLTVFYSVAIFGLYL 218
           M  + A  ALFGL  FY++  FG Y+
Sbjct: 134 MLASGAFTALFGLGYFYNIHSFGFYV 159


>AF311320-1|AAG29853.1|  533|Homo sapiens glycerol 3-phosphate
           permease protein.
          Length = 533

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 141 MFTASASVALFGLTVFYSVAIFGLYL 218
           M  + A  ALFGL  FY++  FG Y+
Sbjct: 134 MLASGAFTALFGLGYFYNIHSFGFYV 159


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,145,123
Number of Sequences: 237096
Number of extensions: 1229244
Number of successful extensions: 5863
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5863
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)