Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324B12f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    31   0.005
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    26   0.27 
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            24   1.1  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    23   1.9  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   3.3  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   5.8  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   5.8  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 31.5 bits (68), Expect = 0.005
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -1

Query: 518 APEIILGIPYKHGVDLWSSACTIYEMTTGKILFTGSSNNK 399
           APE+IL   +    D WS    ++E+ TG   FTG    K
Sbjct: 533 APEVILNKGHDISADYWSLGVLMFELLTGTPPFTGGDPMK 572


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 518 APEIILGIPYKHGVDLWSSACTIYEMTTG 432
           +PE++   PY   VD+W+    +Y +  G
Sbjct: 80  SPEVLKKEPYGKPVDIWACGVILYILLVG 108


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 251 PQLIYLYQ*IRPFCGVKNYNYN*NV 325
           PQ+ Y  +   P C V NYN   NV
Sbjct: 143 PQVPYTVKNFHPRCAVNNYNDPSNV 167


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = -1

Query: 497 IPYKHGVDLWSSACTIY 447
           + Y   +D+W S+C+++
Sbjct: 270 VSYVKAIDVWMSSCSVF 286


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = -1

Query: 497 IPYKHGVDLWSSACTIYEMTTGKILFTGSSNNKMLKCF 384
           I Y+   D++++  +   M+   +LF G  NN  + C+
Sbjct: 294 IEYEGIQDIFNTQSSAKVMSKNGVLFFGLVNNSAIGCW 331


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 374 KGKIPNKLIRKGKFKDQHFNYNYNF 300
           K ++ +KL  +  F+   F Y Y F
Sbjct: 205 KAEVGSKLRPRSSFQGPPFTYRYGF 229


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = -1

Query: 497 IPYKHGVDLWSSACTIYEMTTGKILFTGSSNNKMLKCF 384
           + Y+   D++++      M+   +LF G  NN  + C+
Sbjct: 294 VQYQGVQDIFNTESIAKIMSKNGVLFFGLMNNSAIGCW 331


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,727
Number of Sequences: 438
Number of extensions: 2479
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)