Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324B06f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC003590-1|AAH03590.1|  173|Homo sapiens mitochondrial ribosomal...   169   7e-42
AK024702-1|BAB14968.1|  173|Homo sapiens protein ( Homo sapiens ...   169   7e-42
AK024433-1|BAB15723.1|  192|Homo sapiens FLJ00023 protein protein.    169   7e-42
AB061208-1|BAB54958.1|   33|Homo sapiens mitochondrial ribosomal...    34   0.26 
AF254757-1|AAL48195.1|  463|Homo sapiens cathepsin C protein.          29   7.5  

>BC003590-1|AAH03590.1|  173|Homo sapiens mitochondrial ribosomal
           protein S25 protein.
          Length = 173

 Score =  169 bits (410), Expect = 7e-42
 Identities = 79/158 (50%), Positives = 106/158 (67%), Gaps = 2/158 (1%)
 Frame = +1

Query: 49  MPFMKGRAPIRRTLNYLNAGKLVLKDKIKIFSVAYNITGQNNVGTKEFCFWYLPQIQYKN 228
           MP MKGR PIRRTL YL+ G +V KD +K+ +V YN  G+   G ++F F+ +PQIQYKN
Sbjct: 1   MP-MKGRFPIRRTLQYLSQGNVVFKDSVKVMTVNYNTHGELGEGARKFVFFNIPQIQYKN 59

Query: 229 PDVQIVTLKNLTPSPFIKCYLDDGRKILIDVDNKSKEDILEHLLHTVGKSXXXXXXXXXX 408
           P VQI+  KN+TPSPF++ YLD G ++L+DV+ KS ++I+EH+   +GK+          
Sbjct: 60  PWVQIMMFKNMTPSPFLRFYLDSGEQVLVDVETKSNKEIMEHIRKILGKNEETLREEEEE 119

Query: 409 XXXXDNPANFGVG--CDRSCMCEVFGQVPCSGVVPLPK 516
                +PANFG    C R C+CEV GQVPC  +VPLPK
Sbjct: 120 KKQLSHPANFGPRKYCLRECICEVEGQVPCPSLVPLPK 157


>AK024702-1|BAB14968.1|  173|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21049 fis, clone CAS00384. ).
          Length = 173

 Score =  169 bits (410), Expect = 7e-42
 Identities = 79/158 (50%), Positives = 106/158 (67%), Gaps = 2/158 (1%)
 Frame = +1

Query: 49  MPFMKGRAPIRRTLNYLNAGKLVLKDKIKIFSVAYNITGQNNVGTKEFCFWYLPQIQYKN 228
           MP MKGR PIRRTL YL+ G +V KD +K+ +V YN  G+   G ++F F+ +PQIQYKN
Sbjct: 1   MP-MKGRFPIRRTLQYLSQGNVVFKDSVKVMTVNYNTHGELGEGARKFVFFNIPQIQYKN 59

Query: 229 PDVQIVTLKNLTPSPFIKCYLDDGRKILIDVDNKSKEDILEHLLHTVGKSXXXXXXXXXX 408
           P VQI+  KN+TPSPF++ YLD G ++L+DV+ KS ++I+EH+   +GK+          
Sbjct: 60  PWVQIMMFKNMTPSPFLRFYLDSGEQVLVDVETKSNKEIMEHIRKILGKNEETLREEEEE 119

Query: 409 XXXXDNPANFGVG--CDRSCMCEVFGQVPCSGVVPLPK 516
                +PANFG    C R C+CEV GQVPC  +VPLPK
Sbjct: 120 KKQLSHPANFGPRKYCLRECICEVEGQVPCPSLVPLPK 157


>AK024433-1|BAB15723.1|  192|Homo sapiens FLJ00023 protein protein.
          Length = 192

 Score =  169 bits (410), Expect = 7e-42
 Identities = 79/158 (50%), Positives = 106/158 (67%), Gaps = 2/158 (1%)
 Frame = +1

Query: 49  MPFMKGRAPIRRTLNYLNAGKLVLKDKIKIFSVAYNITGQNNVGTKEFCFWYLPQIQYKN 228
           MP MKGR PIRRTL YL+ G +V KD +K+ +V YN  G+   G ++F F+ +PQIQYKN
Sbjct: 20  MP-MKGRFPIRRTLQYLSQGNVVFKDSVKVMTVNYNTHGELGEGARKFVFFNIPQIQYKN 78

Query: 229 PDVQIVTLKNLTPSPFIKCYLDDGRKILIDVDNKSKEDILEHLLHTVGKSXXXXXXXXXX 408
           P VQI+  KN+TPSPF++ YLD G ++L+DV+ KS ++I+EH+   +GK+          
Sbjct: 79  PWVQIMMFKNMTPSPFLRFYLDSGEQVLVDVETKSNKEIMEHIRKILGKNEETLREEEEE 138

Query: 409 XXXXDNPANFGVG--CDRSCMCEVFGQVPCSGVVPLPK 516
                +PANFG    C R C+CEV GQVPC  +VPLPK
Sbjct: 139 KKQLSHPANFGPRKYCLRECICEVEGQVPCPSLVPLPK 176


>AB061208-1|BAB54958.1|   33|Homo sapiens mitochondrial ribosomal
           protein S25 protein.
          Length = 33

 Score = 34.3 bits (75), Expect = 0.26
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 85  TLNYLNAGKLVLKDKIKIFSVAYNITGQNNVG 180
           TL YL+ G +V KD +K+ +V YN  G+   G
Sbjct: 1   TLQYLSQGNVVFKDSVKVMTVNYNTHGELGEG 32


>AF254757-1|AAL48195.1|  463|Homo sapiens cathepsin C protein.
          Length = 463

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
 Frame = -1

Query: 362 CSKCSKISSFDLLSTSIKIFLPSSR*HFMKGEGVKFFKVTI--CTSGFLYCICGRYQKQN 189
           C  C   +S  +L   I+I   +S+   +  + V  +      C  GF Y I G+Y +  
Sbjct: 255 CGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSYSQYAQGCEGGFPYLIAGKYAQDF 314

Query: 188 SFVPTLFWP 162
             V    +P
Sbjct: 315 GLVEEACFP 323


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,528,115
Number of Sequences: 237096
Number of extensions: 1409419
Number of successful extensions: 3048
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3043
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)