Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324B06f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024826-16|AAF60793.1|  170|Caenorhabditis elegans Hypothetical...   131   3e-31
Z47075-4|CAE17757.1|  129|Caenorhabditis elegans Hypothetical pr...    40   0.001
Z81038-9|CAB02765.1|  189|Caenorhabditis elegans Hypothetical pr...    32   0.22 
U64844-9|AAB18309.1|  330|Caenorhabditis elegans Serpentine rece...    29   2.0  
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U64844-8|AAB18308.1|  330|Caenorhabditis elegans Serpentine rece...    28   4.7  
Z70271-5|CAA94233.2|  443|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AF031477-1|AAC15586.1|  443|Caenorhabditis elegans delta6-fatty-...    27   6.2  

>AC024826-16|AAF60793.1|  170|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.1 protein.
          Length = 170

 Score =  131 bits (316), Expect = 3e-31
 Identities = 63/158 (39%), Positives = 95/158 (60%), Gaps = 2/158 (1%)
 Frame = +1

Query: 49  MPFMKGRAPIRRTLNYLNAGKLVLKDKIKIFSVAY--NITGQNNVGTKEFCFWYLPQIQY 222
           MPFM G  P+RRT  YL  GK+ L+D + +FS+ +  N T + + G ++F +W   Q+QY
Sbjct: 1   MPFMHGSMPLRRTFFYLQQGKVKLRDNVNVFSMGFHKNPTPEQS-GARDFVYWNWAQLQY 59

Query: 223 KNPDVQIVTLKNLTPSPFIKCYLDDGRKILIDVDNKSKEDILEHLLHTVGKSXXXXXXXX 402
            NP VQ+V   +   +PF + YL+DGR++L D+D   +E+I + L  T+GK+        
Sbjct: 60  HNPKVQLVKHADKVVTPFARAYLNDGREVLFDLDGMKREEIEKLLAKTLGKTELVERREH 119

Query: 403 XXXXXXDNPANFGVGCDRSCMCEVFGQVPCSGVVPLPK 516
                  NPA+FG   +R CMCEV GQ PC+G++  P+
Sbjct: 120 LESIAKLNPADFGSKNERQCMCEVQGQHPCTGLLRAPQ 157


>Z47075-4|CAE17757.1|  129|Caenorhabditis elegans Hypothetical
           protein E02H1.8 protein.
          Length = 129

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 20/85 (23%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
 Frame = +1

Query: 127 KIKIFSVAYNITGQNNVGTKEFCFWYL-PQIQYKNPDVQIVT-LKNLTPSPFIKCYLDDG 300
           K+K   ++ +    +N+  + F    + P+++  NP+V++ T ++N   +PF    LDDG
Sbjct: 31  KVKSIDISLDPLHHDNLSIRTFWHSIMAPKVRLTNPNVRVKTDIRNDRRAPFFVATLDDG 90

Query: 301 RKILIDVDNKSKEDILEHLLHTVGK 375
           +K+    +N +  D++ +     G+
Sbjct: 91  QKLHFSTENMTAMDVIMNFNRLTGQ 115


>Z81038-9|CAB02765.1|  189|Caenorhabditis elegans Hypothetical
           protein C25A1.13 protein.
          Length = 189

 Score = 32.3 bits (70), Expect = 0.22
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
 Frame = +1

Query: 166 QNNVGTKEFCFWYLPQIQYKNPDVQIVTLKNLTPSPFIKCYLDDGRKILIDVDNKSKEDI 345
           +++VG + F    L +I  KNP V I        +P I+    +GR + I+  N +++++
Sbjct: 57  ESSVGVRNFIENQLVEIGRKNPSVVIYAQPVRNSNPSIRAEYGNGRTLQINAKNMTQDEV 116

Query: 346 LE--HLL 360
            +  HLL
Sbjct: 117 SKDVHLL 123


>U64844-9|AAB18309.1|  330|Caenorhabditis elegans Serpentine
           receptor, class h protein212 protein.
          Length = 330

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -2

Query: 229 DFCT-VFAVDTKSRTLLFLHYFGLLCCRLLKIS*FCL 122
           DFCT  F + T     LFLHYFG L   +     +C+
Sbjct: 4   DFCTSTFYLYTADFQRLFLHYFGFLAIPVHVYGAYCI 40


>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
           protein ZK287.4 protein.
          Length = 1208

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 503 TTPEQGTCPKTSHMHDLSHPTPKF 432
           +TP    CPKTSH+   S P P F
Sbjct: 856 STPHNLCCPKTSHLVPESIPAPPF 879


>U64844-8|AAB18308.1|  330|Caenorhabditis elegans Serpentine
           receptor, class h protein213 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -2

Query: 229 DFCT-VFAVDTKSRTLLFLHYFGLLCCRLLKIS*FCL 122
           DFCT  F + T     LFLHYFG +   +     +C+
Sbjct: 4   DFCTSTFYLYTADFQRLFLHYFGFVAIPVHVYGAYCI 40


>Z70271-5|CAA94233.2|  443|Caenorhabditis elegans Hypothetical
           protein W08D2.4 protein.
          Length = 443

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/15 (66%), Positives = 14/15 (93%)
 Frame = +1

Query: 235 VQIVTLKNLTPSPFI 279
           +QI+T +N+TPSPFI
Sbjct: 359 LQILTTRNMTPSPFI 373


>AF031477-1|AAC15586.1|  443|Caenorhabditis elegans
           delta6-fatty-acid-desaturase protein.
          Length = 443

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/15 (66%), Positives = 14/15 (93%)
 Frame = +1

Query: 235 VQIVTLKNLTPSPFI 279
           +QI+T +N+TPSPFI
Sbjct: 359 LQILTTRNMTPSPFI 373


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,113,241
Number of Sequences: 27780
Number of extensions: 244403
Number of successful extensions: 639
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)