Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324B06f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    23   2.5  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    23   2.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   3.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   3.3  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    21   5.8  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    21   5.8  

>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +1

Query: 217 QYKNPDVQIVTLKNLTPSPFIKCYLDDG 300
           +Y N D+ +V       + ++ C LD G
Sbjct: 27  KYDNVDIDVVLNTERLLNAYVNCLLDQG 54


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +1

Query: 217 QYKNPDVQIVTLKNLTPSPFIKCYLDDG 300
           +Y N D+ +V       + ++ C LD G
Sbjct: 27  KYDNVDIDVVLNTERLLNAYVNCLLDQG 54


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 75  WRSSFHERHFECLLK 31
           W S + E  F+CLLK
Sbjct: 280 WFSEYWEEVFDCLLK 294


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 75  WRSSFHERHFECLLK 31
           W S + E  F+CLLK
Sbjct: 370 WFSEYWEEVFDCLLK 384


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 217 QYKNPDVQIVTLKNLTPSPFIKCYLDDG 300
           +Y + D+  +       + +IKC LD+G
Sbjct: 24  KYDDMDIDRILQNGRILTNYIKCMLDEG 51


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 217 QYKNPDVQIVTLKNLTPSPFIKCYLDDG 300
           +Y + D+  +       + +IKC LD+G
Sbjct: 24  KYDDMDIDRILQNGRILTNYIKCMLDEG 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,869
Number of Sequences: 438
Number of extensions: 3061
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)