Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS324B05f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0878 + 8624616-8624761,8625861-8626274,8626895-8626945,862... 32 0.24
04_04_0630 - 26719136-26719150,26720065-26720134,26720438-26721912 31 0.74
08_02_0883 + 22229278-22230009 30 0.98
10_08_1061 - 22622805-22622961,22623262-22623441,22623482-226234... 30 1.3
03_05_0923 + 28848925-28849272,28849636-28849869,28849965-288501... 30 1.3
01_06_0737 + 31592562-31592786,31593314-31593541,31593981-315940... 29 1.7
01_01_0012 + 71903-72935,73468-73981,74619-76008 29 1.7
06_02_0090 + 11604017-11604082,11604345-11604397,11604710-11605229 29 3.0
05_05_0155 + 22787658-22787930,22788029-22788096,22789600-227899... 29 3.0
04_04_0190 - 23442824-23442846,23442891-23442949,23443613-234437... 29 3.0
02_05_1213 - 34963971-34964658,34965030-34965270,34965347-349657... 29 3.0
11_06_0022 + 19321886-19321918,19323059-19323131,19323587-193236... 28 4.0
03_02_0609 - 9823120-9823573,9823903-9824102,9824240-9824335,982... 28 4.0
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 28 4.0
11_03_0140 - 10637818-10638059,10638189-10638461,10639963-106404... 28 5.2
06_03_0946 - 26208253-26209075,26209181-26209329,26209525-26209812 28 5.2
10_01_0293 + 3039945-3040857,3042457-3042630,3043562-3044556 27 6.9
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 27 6.9
03_02_0472 - 8737955-8738580,8738704-8738767,8739090-8739239,873... 27 6.9
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 27 9.1
09_01_0117 + 1808669-1809181,1810038-1810059,1810170-1810223,181... 27 9.1
08_01_0352 + 3102552-3105243,3105684-3105748,3105824-3106492 27 9.1
07_03_1450 + 26620178-26620456,26622122-26622775 27 9.1
04_03_0969 + 21331989-21332674,21333090-21333194,21333269-213333... 27 9.1
02_05_1240 + 35181983-35182615,35183025-35183856,35183936-351844... 27 9.1
02_05_1200 - 34922073-34922273,34922397-34922469,34922976-349230... 27 9.1
>08_01_0878 +
8624616-8624761,8625861-8626274,8626895-8626945,
8627179-8627215,8629535-8630059
Length = 390
Score = 32.3 bits (70), Expect = 0.24
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +3
Query: 339 LAFG*ALRSS---ISRSCVPDPGARLAQRAPSRHRLLRRGPRHSP-STPH 476
LA G +L ++ ++R +P GA + A RHR RRGP SP PH
Sbjct: 263 LALGSSLATASAWVARHVLPYAGANSSTPAHHRHRRRRRGPHRSPLRAPH 312
>04_04_0630 - 26719136-26719150,26720065-26720134,26720438-26721912
Length = 519
Score = 30.7 bits (66), Expect = 0.74
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 414 RAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPH 518
R+ +RHR R G R +P P H++ P GS +
Sbjct: 54 RSAARHRGRRHGTRRAPPPPRHRQLSLPLAPGSDY 88
>08_02_0883 + 22229278-22230009
Length = 243
Score = 30.3 bits (65), Expect = 0.98
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -2
Query: 343 ARHPRKHFPGNPARANGATSHPCAL*NDLSHRQWLRSPAAGTSG--TCLRNMPA 188
ARH + FP N A A G++S +S RQ +PA TS T + ++P+
Sbjct: 111 ARHANRPFPANTAAAGGSSSS-----YSISQRQEAAAPARSTSNDDTAMSSVPS 159
>10_08_1061 -
22622805-22622961,22623262-22623441,22623482-22623489,
22623682-22623845,22623969-22624134
Length = 224
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 397 PGSGTHDLEMELRNAQPNARHPRKHFPGNPARANGAT 287
PG+ EMELR A + +HP H P +PA +G T
Sbjct: 185 PGAAMLIDEMELRQA--DEQHPGVHAPQSPAAVSGVT 219
>03_05_0923 +
28848925-28849272,28849636-28849869,28849965-28850131,
28850433-28850651,28850743-28850929,28851012-28851063,
28851158-28851387,28851619-28851717,28851835-28852565,
28853004-28853519,28854140-28854398
Length = 1013
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 359 QCSTECKTSSKTLSWQPSSSKWRNFASLRTLKRPISQTVVK 237
+C + SKT++ P S ++ ++L KRP+ TV K
Sbjct: 683 RCDKNAISDSKTVALHPLPSSFKGLSALLVDKRPVRATVTK 723
>01_06_0737 +
31592562-31592786,31593314-31593541,31593981-31594054,
31594595-31594754,31595979-31596098,31596185-31596293,
31597447-31597628
Length = 365
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +1
Query: 61 EFTDPPCLIDLECAECIPDNMPLVTSHRATNGTFRIASGDEVVLACYGGKFLMYPLQETL 240
E T P + A IP +T+ RA +GT RI+ G V++ GG + +Q +
Sbjct: 140 ELTSKPSTLSHVEASAIP--FAALTAWRALHGTARISEGQRVLVIGGGGAVGLAAVQLAV 197
Query: 241 TTVCEI 258
C +
Sbjct: 198 AAGCSV 203
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 375 RSCVPDPGARLAQ---RAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPH 518
+S P P AR ++ R+P ++R RR +SP H + + SP S H
Sbjct: 514 KSRSPSPSARRSKSRSRSPIKYRRSRRSRSYSPPVRHTRGRRSRSPSRSYH 564
>06_02_0090 + 11604017-11604082,11604345-11604397,11604710-11605229
Length = 212
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +3
Query: 387 PDPGARLAQRAPSRHRLLRRGPRHSPS 467
P PG RLAQ A S R L R P PS
Sbjct: 176 PRPGGRLAQAAASPFRCLYRPPPPRPS 202
>05_05_0155 +
22787658-22787930,22788029-22788096,22789600-22789915,
22790207-22790323
Length = 257
Score = 28.7 bits (61), Expect = 3.0
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 450 PRHSPSTPHHKRTQEPSPHGSPH 518
P H P PHH P P PH
Sbjct: 39 PHHHPHPPHHHPPHHPHPPHHPH 61
>04_04_0190 -
23442824-23442846,23442891-23442949,23443613-23443737,
23443767-23443901,23444195-23444301,23444488-23444566,
23444856-23444942,23445045-23445281,23445783-23446128,
23446486-23446694
Length = 468
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 203 P*HASTTSSPDAILKVPFVARCDVTKGMLSGMHSAHSR 90
P H S+ S P + +PF++ CD G++ G S+
Sbjct: 371 PNHDSSHSKPAFLALLPFLSFCDEANGLIHGASQGTSK 408
>02_05_1213 -
34963971-34964658,34965030-34965270,34965347-34965736,
34966515-34966781,34966881-34967249,34967931-34968014,
34968113-34968226,34969952-34970018
Length = 739
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +3
Query: 447 GPRHSPSTPHHKRTQEP-SPHGSP 515
GP H PS HH+R P SP SP
Sbjct: 62 GPVHPPSHKHHRRPYHPHSPSPSP 85
>11_06_0022 +
19321886-19321918,19323059-19323131,19323587-19323680,
19324383-19324499,19324584-19324641,19324713-19325114
Length = 258
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 156 HLQDCVRR*SGAGMLRRQVPDVPAAGDLNHCL*DRS 263
HL+ CVRR S L V VP G + C DR+
Sbjct: 66 HLKQCVRRYSSFDFLTEVVNKVPDLGGADSCGDDRA 101
>03_02_0609 -
9823120-9823573,9823903-9824102,9824240-9824335,
9824454-9824567,9824711-9824774,9825206-9825312
Length = 344
Score = 28.3 bits (60), Expect = 4.0
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +3
Query: 303 RAGLPGKCFRGCLAFG*ALRSSISRSCVPDP-GARLAQRAPSRHRLLRRGPRHSPSTPHH 479
R G G R C L S SRS P G R SR R PR S S +
Sbjct: 175 RCGERGHIERNCQNSPRNLSRSRSRSLSGSPRGRRDRDDRRSRSLSYSRSPRRSISPAAN 234
Query: 480 KRTQEPSPHG 509
+ + PSP+G
Sbjct: 235 GKERNPSPNG 244
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = +3
Query: 354 ALRSSISRSCVPDPGARLAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGS 512
A S S S P P A A R P+ P SPS P +PS + S
Sbjct: 8 AASGSASSSRKPVPVAAAAARRPAPSPAAAAAPAPSPSNPSAVSDSDPSSYSS 60
>11_03_0140 -
10637818-10638059,10638189-10638461,10639963-10640473,
10640556-10640768,10642717-10642784,10642893-10642958,
10644862-10644961
Length = 490
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +3
Query: 372 SRSCVPDPGARLAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSP 503
S S +PD + A R S LRR PR H R+ + P
Sbjct: 426 SESRIPDSARQQAARDTSSGSTLRRRPRQFGGNVHSLRSDDQGP 469
>06_03_0946 - 26208253-26209075,26209181-26209329,26209525-26209812
Length = 419
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 82 LIDLECAECIPDNMPLVTSHRATNGTFRIASGD 180
L+ + AE +P +MP + +H+ T GTF + D
Sbjct: 232 LLPPQDAEFLPADMPALLAHKLTLGTFVAVAAD 264
>10_01_0293 + 3039945-3040857,3042457-3042630,3043562-3044556
Length = 693
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = -1
Query: 173 DAILKVPFVARCDVTKGMLSG---MHSAHSRSIRHG 75
DA + +P R D+ G MHS+ SR+IRHG
Sbjct: 506 DANIPLPLGLRLDIAIESAEGLRYMHSSTSRTIRHG 541
>03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +3
Query: 354 ALRSSISRSCVPDPGARLAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHR 521
A R+ +S+S PD A + SR LR GP+ TP +R + G +R
Sbjct: 976 ARRALVSQSASPDAAAFAVHSSCSR--ALRMGPKPFAGTPQGQRDAPHTEAGCTYR 1029
>03_02_0472 -
8737955-8738580,8738704-8738767,8739090-8739239,
8739311-8739422,8739686-8739708
Length = 324
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 360 RSSISRSCVPDPGARLAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHG 509
R S RS G+R R+P R+R R +P+++R PS G
Sbjct: 205 RGSRRRSYSSYRGSRYRSRSPYRYRRERSCSYDHSVSPYYRRCYSPSARG 254
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +3
Query: 417 APSRHRLLRRGPRHSPSTPH-HKRTQEPSPHGSPH 518
A +R + L RGP P PH K P P PH
Sbjct: 125 AQARAQALPRGPGQEPPPPHVPKAAPPPPPPPPPH 159
>09_01_0117 +
1808669-1809181,1810038-1810059,1810170-1810223,
1810684-1810892
Length = 265
Score = 27.1 bits (57), Expect = 9.1
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = +3
Query: 366 SISRSCVPDPGARLAQRAPSR-HRLLRRGPRHSPSTPHHKRTQEP----SPHGSP 515
S+S S P P RL R P+ HR R + TP H+RT+ P +P SP
Sbjct: 14 SLSLSRTPPPRRRLRLRTPTPCHR--ASTTRRALHTPPHQRTRLPPLSVAPSASP 66
>08_01_0352 + 3102552-3105243,3105684-3105748,3105824-3106492
Length = 1141
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 393 GLVRTTLKWSSAMLNRMQDILENTFLATQLEQMAQLRILA 274
G+ + W S L ++ +L N L L M QLR LA
Sbjct: 671 GVQAPKVVWESMELQTLKGVLANLNLVENLGHMTQLRTLA 710
>07_03_1450 + 26620178-26620456,26622122-26622775
Length = 310
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +3
Query: 405 LAQRAPSRHRLLRRGPRHSPSTPHHKRTQEPSPHGSPHR 521
+A R + R+G +H + H +++ +P P PH+
Sbjct: 99 VADRWEFANEFFRKGAKHLLAEIHRRKSSQPPPPPMPHQ 137
>04_03_0969 +
21331989-21332674,21333090-21333194,21333269-21333391,
21333458-21333628,21333710-21333839,21333926-21334135,
21334700-21334855
Length = 526
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +3
Query: 387 PDPGARLAQRAPSRHRLLRRGPRHSP--STPHHKRTQEPSPHG 509
P P + HR+ R +H P P+H+R+ PS G
Sbjct: 108 PPPSESIQIETGKEHRITFREQQHQPPQPPPYHQRSGGPSSRG 150
>02_05_1240 +
35181983-35182615,35183025-35183856,35183936-35184497,
35184581-35184722,35184832-35184939,35185055-35185267,
35185355-35185465,35185684-35185878,35186094-35186268,
35186379-35186413
Length = 1001
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 345 FG*ALRSSISRSCVPDPGARLAQRAPS 425
F A+ SSISRS PDP +L +R PS
Sbjct: 281 FASAVGSSISRSTTPDP--QLIRRTPS 305
>02_05_1200 -
34922073-34922273,34922397-34922469,34922976-34923019,
34923107-34923183,34923433-34923529,34923668-34924062,
34926577-34926620,34926702-34926770,34926856-34926956,
34927689-34927856,34927940-34928141,34928269-34928708,
34928786-34928884,34929123-34929263
Length = 716
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 465 KGYGAVLVEADGGEMAHAARAWLLGLVRTTLKWS 364
+G+ VLV A G + AA W G V+ L+W+
Sbjct: 9 RGFVDVLVLAGGRTSSGAAATWRSGDVKKALQWA 42
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,436,200
Number of Sequences: 37544
Number of extensions: 378487
Number of successful extensions: 1319
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1319
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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