Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324B02f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125955-5|AAO12427.1|  273|Caenorhabditis elegans Hypothetical ...   171   2e-43
AF125955-3|AAD14720.1|  336|Caenorhabditis elegans Hypothetical ...   171   2e-43
Z75545-3|CAA99886.1|  922|Caenorhabditis elegans Hypothetical pr...    36   0.018
Z19153-3|CAA79547.1|  301|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U97007-1|AAB52291.1|  932|Caenorhabditis elegans Glutamate recep...    27   6.2  
AL032637-5|CAA21609.1|  245|Caenorhabditis elegans Hypothetical ...    27   6.2  
AF014940-1|AAB63933.1|  143|Caenorhabditis elegans Hypothetical ...    27   6.2  
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p...    27   8.1  
AL132898-18|CAC14411.2|  417|Caenorhabditis elegans Hypothetical...    27   8.1  

>AF125955-5|AAO12427.1|  273|Caenorhabditis elegans Hypothetical
           protein F46E10.10b protein.
          Length = 273

 Score =  171 bits (417), Expect = 2e-43
 Identities = 84/137 (61%), Positives = 103/137 (75%)
 Frame = +3

Query: 108 MAEPIRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLEGVVMELADC 287
           M+ P+RV+VTGAAGQI YS++ +IA G VFG +QPV L LLD+     +LEGVV EL DC
Sbjct: 1   MSAPLRVLVTGAAGQIGYSIVIRIADGTVFGKEQPVELVLLDVPQCSNILEGVVFELQDC 60

Query: 288 ALPLLAGVLPTANPEEAFKDVAAAFXVGAMPRKEGMERKDLLAANVRIFKEQGQALDKAA 467
           ALP L  V+   + + AF  +  AF VGAMPR+EGMERKDLLAANV+IFK QG+AL + A
Sbjct: 61  ALPTLFSVVAVTDEKSAFTGIDYAFLVGAMPRREGMERKDLLAANVKIFKSQGKALAEYA 120

Query: 468 RKDVKVLVVGNPANTNA 518
           +   KV+VVGNPANTNA
Sbjct: 121 KPTTKVIVVGNPANTNA 137


>AF125955-3|AAD14720.1|  336|Caenorhabditis elegans Hypothetical
           protein F46E10.10a protein.
          Length = 336

 Score =  171 bits (417), Expect = 2e-43
 Identities = 84/137 (61%), Positives = 103/137 (75%)
 Frame = +3

Query: 108 MAEPIRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLEGVVMELADC 287
           M+ P+RV+VTGAAGQI YS++ +IA G VFG +QPV L LLD+     +LEGVV EL DC
Sbjct: 1   MSAPLRVLVTGAAGQIGYSIVIRIADGTVFGKEQPVELVLLDVPQCSNILEGVVFELQDC 60

Query: 288 ALPLLAGVLPTANPEEAFKDVAAAFXVGAMPRKEGMERKDLLAANVRIFKEQGQALDKAA 467
           ALP L  V+   + + AF  +  AF VGAMPR+EGMERKDLLAANV+IFK QG+AL + A
Sbjct: 61  ALPTLFSVVAVTDEKSAFTGIDYAFLVGAMPRREGMERKDLLAANVKIFKSQGKALAEYA 120

Query: 468 RKDVKVLVVGNPANTNA 518
           +   KV+VVGNPANTNA
Sbjct: 121 KPTTKVIVVGNPANTNA 137


>Z75545-3|CAA99886.1|  922|Caenorhabditis elegans Hypothetical
           protein K10D3.4 protein.
          Length = 922

 Score = 35.9 bits (79), Expect = 0.018
 Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
 Frame = +2

Query: 116 TYKSCCNWC----CRTNCIL-TSLSN-------CVWSSFWTSTTCLPPPS*YCAYDGCT* 259
           TYK C ++C        CI  T+L++       C  SS   STTC  P + YC YDG T 
Sbjct: 453 TYKECQDYCRDARSEPQCIQGTALTDSNGNFIICGGSSA-ASTTC--PANHYCYYDGTTY 509

Query: 260 RCCHGVGRLCSATFGWGSS 316
            CC      CS ++  G+S
Sbjct: 510 GCCPTQAYTCSLSYKSGAS 528


>Z19153-3|CAA79547.1|  301|Caenorhabditis elegans Hypothetical
           protein C38C10.3 protein.
          Length = 301

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = -1

Query: 419 SSKKILPLHTFLSGH 375
           SSKK LP +T+LSGH
Sbjct: 172 SSKKSLPTYTYLSGH 186


>U97007-1|AAB52291.1|  932|Caenorhabditis elegans Glutamate receptor
           family (ampa)protein 5 protein.
          Length = 932

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 278 QLHDNTFKYTHHRRNIKKVEEDRLLRSKNCS 186
           ++HD    Y    R +K++EE RLL  K+CS
Sbjct: 184 KVHDGD--YMKAARQVKELEECRLLHKKDCS 212


>AL032637-5|CAA21609.1|  245|Caenorhabditis elegans Hypothetical
           protein Y43F8C.5 protein.
          Length = 245

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 195 KLLQTQFDKEVSMQFVR 145
           K+LQ QFDKEV   F+R
Sbjct: 33  KMLQEQFDKEVEQHFLR 49


>AF014940-1|AAB63933.1|  143|Caenorhabditis elegans Hypothetical
           protein W02D7.3 protein.
          Length = 143

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 325 FAVGRTPAKSGRAQSANSMTTPSSTPIIGAISRRWRKTGC 206
           +A   +P  S  ++S  S  + S+TP   A+SRR    GC
Sbjct: 73  YAKRHSPPPSYSSRSKQSSVSSSATPTKSAVSRRNYLAGC 112


>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
            F25F2.2 protein.
          Length = 4307

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = -1

Query: 320  CRKNPSQKWQSTVGQLHDNTFK 255
            C K+P ++WQ  +  +H++T++
Sbjct: 3689 CAKSPCEQWQLCIPSVHNSTYE 3710


>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
            F25F2.2 protein.
          Length = 4307

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = -1

Query: 320  CRKNPSQKWQSTVGQLHDNTFK 255
            C K+P ++WQ  +  +H++T++
Sbjct: 3689 CAKSPCEQWQLCIPSVHNSTYE 3710


>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
            protein F25F2.2 protein.
          Length = 4307

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = -1

Query: 320  CRKNPSQKWQSTVGQLHDNTFK 255
            C K+P ++WQ  +  +H++T++
Sbjct: 3689 CAKSPCEQWQLCIPSVHNSTYE 3710


>AL132898-18|CAC14411.2|  417|Caenorhabditis elegans Hypothetical
           protein Y59A8B.13 protein.
          Length = 417

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -2

Query: 499 LPTTRTF--TSLRAALSKAWPCSLKMRTLAARRSF 401
           LPTT+ F  TS    + + W C +  + L+++RS+
Sbjct: 42  LPTTQKFRQTSNGRTMKQTWTCGVCRKELSSKRSY 76


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,324,276
Number of Sequences: 27780
Number of extensions: 222420
Number of successful extensions: 740
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)