Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS324B01f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK074803-1|BAC11217.1|  807|Homo sapiens protein ( Homo sapiens ...    89   9e-18
AB051390-1|BAB18461.1|  807|Homo sapiens VSGP/F-spondin protein.       89   9e-18
AB018305-1|BAA34482.2|  724|Homo sapiens KIAA0762 protein protein.     78   2e-14
U79716-1|AAC51105.1| 3460|Homo sapiens reelin protein.                 38   0.016
AC073208-1|AAP22355.1|   44|Homo sapiens unknown protein.              34   0.35 
U77546-1|AAB36755.1|  120|Homo sapiens immunoglobulin variable r...    30   5.7  
U77545-1|AAB36754.1|  120|Homo sapiens immunoglobulin variable r...    30   5.7  

>AK074803-1|BAC11217.1|  807|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90322 fis, clone NT2RP2001755, highly similar to
           Rattus norvegicus f-spondin mRNA. ).
          Length = 807

 Score = 89.0 bits (211), Expect = 9e-18
 Identities = 47/139 (33%), Positives = 72/139 (51%)
 Frame = +1

Query: 97  GSKSPGDNHYRLIVNGEVERYAPDQRYVVTLVGSRTHDVVQQFAGFKIILDPLNPDTRRA 276
           G++  G   + L V G+ + Y P   Y VTL  +        F GF +I    N +  + 
Sbjct: 52  GTRREGYTEFSLRVEGDPDFYKPGTSYRVTLSAAPP----SYFRGFTLIALRENREGDKE 107

Query: 277 PSKQGQFQLFADTLTKFDEECTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVYENA 456
               G FQ+  +  T+F   C  +V E+    +T +QV W APPAG+GCV+LKA + +  
Sbjct: 108 EDHAGTFQIIDEEETQFMSNCPVAVTESTPRRRTRIQVFWIAPPAGTGCVILKASIVQKR 167

Query: 457 SRWFAEDGQLTKRICEDTS 513
             +F ++G LTK++CE  S
Sbjct: 168 IIYFQDEGSLTKKLCEQDS 186


>AB051390-1|BAB18461.1|  807|Homo sapiens VSGP/F-spondin protein.
          Length = 807

 Score = 89.0 bits (211), Expect = 9e-18
 Identities = 47/139 (33%), Positives = 72/139 (51%)
 Frame = +1

Query: 97  GSKSPGDNHYRLIVNGEVERYAPDQRYVVTLVGSRTHDVVQQFAGFKIILDPLNPDTRRA 276
           G++  G   + L V G+ + Y P   Y VTL  +        F GF +I    N +  + 
Sbjct: 52  GTRREGYTEFSLRVEGDPDFYKPGTSYRVTLSAAPP----SYFRGFTLIALRENREGDKE 107

Query: 277 PSKQGQFQLFADTLTKFDEECTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVYENA 456
               G FQ+  +  T+F   C  +V E+    +T +QV W APPAG+GCV+LKA + +  
Sbjct: 108 EDHAGTFQIIDEEETQFMSNCPVAVTESTPRRRTRIQVFWIAPPAGTGCVILKASIVQKR 167

Query: 457 SRWFAEDGQLTKRICEDTS 513
             +F ++G LTK++CE  S
Sbjct: 168 IIYFQDEGSLTKKLCEQDS 186


>AB018305-1|BAA34482.2|  724|Homo sapiens KIAA0762 protein protein.
          Length = 724

 Score = 78.2 bits (184), Expect = 2e-14
 Identities = 36/97 (37%), Positives = 55/97 (56%)
 Frame = +1

Query: 223 FAGFKIILDPLNPDTRRAPSKQGQFQLFADTLTKFDEECTNSVVEADDLPKTEVQVMWKA 402
           F GF +I    N +  +     G FQ+  +  T+F   C  +V E+    +T +QV W A
Sbjct: 7   FRGFTLIALRENREGDKEEDHAGTFQIIDEEETQFMSNCPVAVTESTPRRRTRIQVFWIA 66

Query: 403 PPAGSGCVLLKAMVYENASRWFAEDGQLTKRICEDTS 513
           PPAG+GCV+LKA + +    +F ++G LTK++CE  S
Sbjct: 67  PPAGTGCVILKASIVQKRIIYFQDEGSLTKKLCEQDS 103


>U79716-1|AAC51105.1| 3460|Homo sapiens reelin protein.
          Length = 3460

 Score = 38.3 bits (85), Expect = 0.016
 Identities = 35/136 (25%), Positives = 50/136 (36%)
 Frame = +1

Query: 97  GSKSPGDNHYRLIVNGEVERYAPDQRYVVTLVGSRTHDVVQQFAGFKIILDPLNPDTRRA 276
           G    G+    L + G    Y P Q Y VT+  S   D +    G           +   
Sbjct: 48  GDGEQGEVLISLHIAGNPTYYVPGQEYHVTISTSTFFDGLL-VTGLYTSTSVQASQSIGG 106

Query: 277 PSKQGQFQLFADTLTKFDEECTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVYENA 456
            S  G F + +D        C+        LP T +  +W APPAG+GCV   A      
Sbjct: 107 SSAFG-FGIMSDHQFGNQFMCSVVASHVSHLPTTNLSFIWIAPPAGTGCVNFMATATHRG 165

Query: 457 SRWFAEDGQLTKRICE 504
              F +   L +++CE
Sbjct: 166 QVIFKD--ALAQQLCE 179


>AC073208-1|AAP22355.1|   44|Homo sapiens unknown protein.
          Length = 44

 Score = 33.9 bits (74), Expect = 0.35
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 337 CTNSVVEADDLPKTEVQVMWKAPPAGSGCV 426
           C+        LP T +  +W APPAG+GCV
Sbjct: 13  CSVVASHVSHLPTTNLSFIWIAPPAGTGCV 42


>U77546-1|AAB36755.1|  120|Homo sapiens immunoglobulin variable
           region protein.
          Length = 120

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +1

Query: 241 ILDPLNPDTRRAPSKQGQFQLFAD 312
           I++P N DTR +PS QGQ  + AD
Sbjct: 50  IINPRNSDTRYSPSFQGQVTISAD 73


>U77545-1|AAB36754.1|  120|Homo sapiens immunoglobulin variable
           region protein.
          Length = 120

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +1

Query: 241 ILDPLNPDTRRAPSKQGQFQLFAD 312
           I++P N DTR +PS QGQ  + AD
Sbjct: 50  IINPRNSDTRYSPSFQGQVTISAD 73


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,083,559
Number of Sequences: 237096
Number of extensions: 1742214
Number of successful extensions: 5107
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5100
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)