BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS324A11f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237812-1|AAG09757.1| 158|Homo sapiens NPD010 protein. 40 0.005
AB037163-1|BAA96872.1| 158|Homo sapiens DSCR5b protein. 40 0.005
AB035745-1|BAA95636.1| 158|Homo sapiens DSCR5b protein. 40 0.005
BT007053-1|AAP35702.1| 134|Homo sapiens Down syndrome critical ... 40 0.007
BC011007-1|AAH11007.1| 134|Homo sapiens phosphatidylinositol gl... 40 0.007
BC005180-1|AAH05180.1| 134|Homo sapiens phosphatidylinositol gl... 40 0.007
AB039659-1|BAB12395.1| 134|Homo sapiens PIG-P protein. 40 0.007
AB037162-1|BAA96871.1| 134|Homo sapiens DSCR5a protein. 40 0.007
AB035744-1|BAA95635.1| 134|Homo sapiens DSCR5a3 protein. 40 0.007
AB035743-1|BAA95634.1| 134|Homo sapiens DSCR5a2 protein. 40 0.007
AB035742-1|BAA95633.1| 134|Homo sapiens DSCR5a1 protein. 40 0.007
AL834498-1|CAD39156.1| 716|Homo sapiens hypothetical protein pr... 30 5.7
AC093748-1|AAY40983.1| 443|Homo sapiens unknown protein. 30 5.7
AB209181-1|BAD92418.1| 796|Homo sapiens Hypothetical protein DK... 30 5.7
>AF237812-1|AAG09757.1| 158|Homo sapiens NPD010 protein.
Length = 158
Score = 39.9 bits (89), Expect = 0.005
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +1
Query: 364 NILLITKTVENLATK*PAMPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWA 519
++ LI L+ M E++P+P P R++YGF L+L S+ ++ +WA
Sbjct: 7 SLTLIVFLFHRLSKAPGKMVENSPSPLPERAIYGFVLFLSSQFGFILYLVWA 58
>AB037163-1|BAA96872.1| 158|Homo sapiens DSCR5b protein.
Length = 158
Score = 39.9 bits (89), Expect = 0.005
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +1
Query: 364 NILLITKTVENLATK*PAMPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWA 519
++ LI L+ M E++P+P P R++YGF L+L S+ ++ +WA
Sbjct: 7 SLTLIVFLFHRLSKAPGKMVENSPSPLPERAIYGFVLFLSSQFGFILYLVWA 58
>AB035745-1|BAA95636.1| 158|Homo sapiens DSCR5b protein.
Length = 158
Score = 39.9 bits (89), Expect = 0.005
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +1
Query: 364 NILLITKTVENLATK*PAMPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWA 519
++ LI L+ M E++P+P P R++YGF L+L S+ ++ +WA
Sbjct: 7 SLTLIVFLFHRLSKAPGKMVENSPSPLPERAIYGFVLFLSSQFGFILYLVWA 58
>BT007053-1|AAP35702.1| 134|Homo sapiens Down syndrome critical
region gene 5 protein.
Length = 134
Score = 39.5 bits (88), Expect = 0.007
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 418 MPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWA 519
M E++P+P P R++YGF L+L S+ ++ +WA
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWA 34
>BC011007-1|AAH11007.1| 134|Homo sapiens phosphatidylinositol
glycan anchor biosynthesis, class P protein.
Length = 134
Score = 39.5 bits (88), Expect = 0.007
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 418 MPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWA 519
M E++P+P P R++YGF L+L S+ ++ +WA
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWA 34
>BC005180-1|AAH05180.1| 134|Homo sapiens phosphatidylinositol
glycan anchor biosynthesis, class P protein.
Length = 134
Score = 39.5 bits (88), Expect = 0.007
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 418 MPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWA 519
M E++P+P P R++YGF L+L S+ ++ +WA
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWA 34
>AB039659-1|BAB12395.1| 134|Homo sapiens PIG-P protein.
Length = 134
Score = 39.5 bits (88), Expect = 0.007
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 418 MPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWA 519
M E++P+P P R++YGF L+L S+ ++ +WA
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWA 34
>AB037162-1|BAA96871.1| 134|Homo sapiens DSCR5a protein.
Length = 134
Score = 39.5 bits (88), Expect = 0.007
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 418 MPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWA 519
M E++P+P P R++YGF L+L S+ ++ +WA
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWA 34
>AB035744-1|BAA95635.1| 134|Homo sapiens DSCR5a3 protein.
Length = 134
Score = 39.5 bits (88), Expect = 0.007
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 418 MPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWA 519
M E++P+P P R++YGF L+L S+ ++ +WA
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWA 34
>AB035743-1|BAA95634.1| 134|Homo sapiens DSCR5a2 protein.
Length = 134
Score = 39.5 bits (88), Expect = 0.007
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 418 MPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWA 519
M E++P+P P R++YGF L+L S+ ++ +WA
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWA 34
>AB035742-1|BAA95633.1| 134|Homo sapiens DSCR5a1 protein.
Length = 134
Score = 39.5 bits (88), Expect = 0.007
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 418 MPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWA 519
M E++P+P P R++YGF L+L S+ ++ +WA
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWA 34
>AL834498-1|CAD39156.1| 716|Homo sapiens hypothetical protein
protein.
Length = 716
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 172 AITLKFSFTSNDNASLVYDVLNVDKELKG-SGVHREFQLKSNVLYIEF 312
AIT +T D +++VY++ N + L G S VHR+ + N+L E+
Sbjct: 430 AITSSTKYTERDGSAMVYNLANALRYLHGLSIVHRDIK-PENLLVCEY 476
>AC093748-1|AAY40983.1| 443|Homo sapiens unknown protein.
Length = 443
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 172 AITLKFSFTSNDNASLVYDVLNVDKELKG-SGVHREFQLKSNVLYIEF 312
AIT +T D +++VY++ N + L G S VHR+ + N+L E+
Sbjct: 227 AITSSTKYTERDGSAMVYNLANALRYLHGLSIVHRDIK-PENLLVCEY 273
>AB209181-1|BAD92418.1| 796|Homo sapiens Hypothetical protein
DKFZp761I032 variant protein.
Length = 796
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 172 AITLKFSFTSNDNASLVYDVLNVDKELKG-SGVHREFQLKSNVLYIEF 312
AIT +T D +++VY++ N + L G S VHR+ + N+L E+
Sbjct: 510 AITSSTKYTERDGSAMVYNLANALRYLHGLSIVHRDIK-PENLLVCEY 556
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,547,668
Number of Sequences: 237096
Number of extensions: 1210913
Number of successful extensions: 3109
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3109
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -