Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS324A07f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 34 0.011
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 33 0.034
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.079
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 29 0.32
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 29 0.32
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 29 0.42
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.56
SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces po... 28 0.73
SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomy... 28 0.73
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 28 0.97
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 28 0.97
SPAC328.10c |rps502|rps5-2|40S ribosomal protein S5|Schizosaccha... 27 1.7
SPAC8C9.08 |rps5||40S ribosomal protein S5|Schizosaccharomyces p... 27 1.7
SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces ... 26 3.0
SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 26 3.0
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 26 3.9
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 3.9
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 26 3.9
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 5.2
SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po... 25 5.2
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 25 5.2
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 23 5.5
SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S... 25 9.0
SPAC644.15 |rpp101|rpp1-1|60S acidic ribosomal protein Rpp1-1|Sc... 25 9.0
SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces pombe... 25 9.0
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 9.0
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 34.3 bits (75), Expect = 0.011
Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 1/129 (0%)
Frame = +3
Query: 114 SAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASAC 293
S+E + S QS +T + KT A+ T T + SA + T ++ +A
Sbjct: 226 SSESTIANSDQSSFITYESTQNPTANKTDASQQSTESTSS--SASAYSYITTLQTATTAQ 283
Query: 294 GLIRFRSAKTKK*Q-TDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSE 470
+ T T S P + S + S + P +A++ +S + AST A +
Sbjct: 284 QTTSENTYSTSGPNLTTSNTSPQISSTISSSSFIVESPSVALSTSSTTTITNASTPAANT 343
Query: 471 PFSRSETPT 497
SRS PT
Sbjct: 344 IISRSSKPT 352
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 32.7 bits (71), Expect = 0.034
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 8/144 (5%)
Frame = +3
Query: 111 LSAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASA 290
+S S+ PQS +ASS T +T S +S + +P+T S +
Sbjct: 468 VSVPSSSSVQPQSSTPISSSSSASSPQSTLSTSSEVVSEVSSTLLSGSSAIPSTSSSTPS 527
Query: 291 CGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVN-----ITSVSRALPAST 455
+I S+ + S++ P S + S T+ I+ + +SVS L +ST
Sbjct: 528 SSII---SSPMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSST 584
Query: 456 VAPSE---PFSRSETPTALVTAKT 518
+PS S S T + +A T
Sbjct: 585 SSPSSTSLSISSSSTSSTFSSAST 608
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 31.5 bits (68), Expect = 0.079
Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 6/163 (3%)
Frame = +3
Query: 51 SLSTPQIPNXXXXXXXXXXXLSAERGHSL----SPQSPLLTVRDCTASSLMKTSATFSGT 218
SLST IP+ LS+ S S S +++ ++SS TS+T S +
Sbjct: 234 SLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSS 293
Query: 219 AGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTL 398
+ + P +++ ++ S +S + S+ + + ++ P S T++ S+ +
Sbjct: 294 SSSSSSPTSTSSTISSSSSSSSSFSSTL---SSSSMSSSSSFSSSPTSSSSTISSSSSSP 350
Query: 399 IPKIAVNITSVSRALP--ASTVAPSEPFSRSETPTALVTAKTP 521
+ TS S++ +STV+ S S S ++ ++ P
Sbjct: 351 SSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRP 393
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 29.5 bits (63), Expect = 0.32
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +3
Query: 225 TEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPT-LARSAVTLI 401
T P S +LPT + S +S + QT +PP SPT + ++ ++
Sbjct: 135 TTFPSTTSITENLPTIDPTRSTRSSSHIQSLSPESKQTSDGHRPP--SPTSITTTSTSID 192
Query: 402 PKIAVNITSVSRALPASTVAPSEPFSRSETPT 497
P +A + S +T + P SR PT
Sbjct: 193 PSVAFSSKST-----LATTRTNAPLSRPSQPT 219
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 29.5 bits (63), Expect = 0.32
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +3
Query: 354 PPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKTP 521
P +RS +L S V LIP + + + S + PAS P S S + + V + P
Sbjct: 439 PSIRSLSLRPSQVPLIPPLKCDPNAFSASTPASGAVSRTPSSVSLSSLSNVNSSMP 494
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 29.1 bits (62), Expect = 0.42
Identities = 30/126 (23%), Positives = 53/126 (42%)
Frame = +3
Query: 126 GHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIR 305
GH+ + S T TA+S + +SAT S T+ + + D+ T PAS+
Sbjct: 141 GHASASTSIPSTAITVTANSTIYSSATSSFPYSTDVSVSTGTSTDIVTLPPPASSTSSFS 200
Query: 306 FRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRS 485
T + S+ SP S + +P ++ S +L +S+V P+ + +
Sbjct: 201 -TITNTSMIPSSSSFTTTTGSPYYNTS--SFLPSSVIS----SASLSSSSVLPTSIITST 253
Query: 486 ETPTAL 503
TP +
Sbjct: 254 STPVTV 259
Score = 25.4 bits (53), Expect = 5.2
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 11/73 (15%)
Frame = +3
Query: 336 TDSAAQPPVRSPTLARSAVT---LIPKIAVNITSV-------SRALPASTVAPSEPFSRS 485
TD PP S T + S +T +IP + T+ S LP+S ++ + S S
Sbjct: 184 TDIVTLPPPASSTSSFSTITNTSMIPSSSSFTTTTGSPYYNTSSFLPSSVISSASLSSSS 243
Query: 486 ETPTALVTA-KTP 521
PT+++T+ TP
Sbjct: 244 VLPTSIITSTSTP 256
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.7 bits (61), Expect = 0.56
Identities = 38/171 (22%), Positives = 57/171 (33%)
Frame = +3
Query: 6 SATTV*PN*KPAATVSLSTPQIPNXXXXXXXXXXXLSAERGHSLSPQSPLLTVRDCTASS 185
S T V P P +T S STP P ++ G S SP T CT S+
Sbjct: 297 STTPVTPTVPPTSTSSTSTPPPPAS-----------TSSTGTSSSPLPSTST--SCTTST 343
Query: 186 LMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVR 365
+ + + PP +++ P + S+ G T T S + PP
Sbjct: 344 SIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTG 403
Query: 366 SPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKT 518
+ T +P + + + ST P + TP A T
Sbjct: 404 NST--TPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTT 452
Score = 27.1 bits (57), Expect = 1.7
Identities = 29/128 (22%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Frame = +3
Query: 147 SPLLTVR-DCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKT 323
SPL T CT S+ + + + PP +++ P + S+ G T
Sbjct: 276 SPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPST 335
Query: 324 KK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSV--SRALPASTVAPSEPFSRSETPT 497
T S + PP + T +P + + TS A +ST S P + T
Sbjct: 336 STSCTTSTSIPPTGNST--TPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSC 393
Query: 498 ALVTAKTP 521
T+ P
Sbjct: 394 TTSTSIPP 401
>SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 507
Score = 28.3 bits (60), Expect = 0.73
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Frame = +3
Query: 183 SLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPV 362
++M T+A + +A T A+ D+ ++ + S+ ++ T T AA V
Sbjct: 139 TVMYTTAVYGDSATTPAASEAQASSDILSSLASLSSASTDNLAASVTP---TTVAAS--V 193
Query: 363 RSPTLARSAVTLIPKIAVNITS-VSRALPASTVAPSEPFSRSETPTA 500
S SA I + + TS VS +P+S ++ + P S SE+ A
Sbjct: 194 ASSVDTDSASATISSVVDSATSSVSTVIPSSIISAAPPDSASESTPA 240
>SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 447
Score = 28.3 bits (60), Expect = 0.73
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -3
Query: 516 SSQLPVPSASPILKTVPMGQP 454
S++LPVPS +PIL T P+ P
Sbjct: 54 SNKLPVPSTNPILTTEPIVGP 74
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.9 bits (59), Expect = 0.97
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Frame = +3
Query: 195 TSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPT 374
TS+ F+ T+G P + ++ P +T +P S F + T T SA+ P S
Sbjct: 621 TSSGFNTTSGL--PTSSASTPLSNSTVAPTSTFTSSGFNT--TSGLPTSSASTPSSNSSI 676
Query: 375 LARSAVT---LIPKIAVNITSVSRALPASTVAPSEPFSRS 485
+ S T + +S S L STVAP+ F+ S
Sbjct: 677 VPTSTFTSSGFNTTSGLPTSSASTPLSNSTVAPTSTFTSS 716
Score = 26.6 bits (56), Expect = 2.2
Identities = 27/115 (23%), Positives = 53/115 (46%)
Frame = +3
Query: 174 TASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQ 353
T+SSL +SAT S A + + A+ + ++ +S+ S+ T S++
Sbjct: 105 TSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLASSST 164
Query: 354 PPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKT 518
S T SA + +++ T+ S + +S++A S S + T +A T+ +
Sbjct: 165 NSTTSATPTSSATS----SSLSSTAASNSATSSSLASS---SLNSTTSATATSSS 212
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 27.9 bits (59), Expect = 0.97
Identities = 22/97 (22%), Positives = 45/97 (46%)
Frame = +3
Query: 210 SGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSA 389
S A + + A SA +PT+ S + ++ S SAA V +P ++ +A
Sbjct: 202 SSVASSSEISAGSATSYVPTSSSSIALSSVVASASV--------SAANKGVSTPAVSSAA 253
Query: 390 VTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTA 500
+ ++ ++S + +ST++ + S S +PT+
Sbjct: 254 ASSSAVVSSVVSSATSVAASSTISSATSSSASASPTS 290
>SPAC328.10c |rps502|rps5-2|40S ribosomal protein
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 203
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 135 LSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAP 257
L+ Q+PL + D A+ + +T G+AGT + A+ +P
Sbjct: 102 LTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRRQAVDVSP 142
>SPAC8C9.08 |rps5||40S ribosomal protein S5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 135 LSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAP 257
L+ Q+PL + D A+ + +T G+AGT + A+ +P
Sbjct: 102 LTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRRQAVDVSP 142
>SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 26.2 bits (55), Expect = 3.0
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +3
Query: 339 DSAAQPPVRSPTLARSAV-TLIPKIAVNITSVSRALPASTVAPSEPFS 479
+S+AQ P A SA T P TS AST++PS PFS
Sbjct: 349 NSSAQSPHPRVFSANSAFSTTSPPPLTPSTSRDYPFSASTISPSTPFS 396
>SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 26.2 bits (55), Expect = 3.0
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 8 CDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 118
C N V LK NG + S+ L+E C Y N C
Sbjct: 374 CSNAVKNLKCSANGTPSGSKISQVLSELC-YYDNKAC 409
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 25.8 bits (54), Expect = 3.9
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Frame = +3
Query: 171 CTASSLMKTSATFSG-TAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSA 347
C SSL KT + TA P I+ ++ + L+R K+ D+
Sbjct: 314 CELSSLSKTDISLPFITADATGPKHINM--EISRAQFEKLVDPLVRRTIDPCKRALKDAN 371
Query: 348 AQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSE 470
Q + + +T +P++ + S+ + PA +V P E
Sbjct: 372 LQTSEINEVILVGGMTRMPRVVETVKSIFKREPAKSVNPDE 412
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.8 bits (54), Expect = 3.9
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +3
Query: 405 KIAVNITSVSRALP---ASTVAPSEPFSRSETPTA 500
KI +T +P AS+ PSE SR+ETPTA
Sbjct: 478 KIVNPVTHTEVVVPQKNASSPNPSETNSRAETPTA 512
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 25.8 bits (54), Expect = 3.9
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 144 QSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASA 290
Q+ T T ++ ++T+ +GTAGTE A +A PTT + +A
Sbjct: 1191 QATTATETQATTATEVQTTTGATGTAGTE-TQATTATEVQPTTGATGTA 1238
Score = 25.8 bits (54), Expect = 3.9
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 144 QSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASA 290
Q+ T T ++ ++T+ +GTAGTE A +A PTT + +A
Sbjct: 1273 QATTATETQATTATEVQTTTGATGTAGTE-TQATTATEVQPTTGATGTA 1320
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 336 TDSAAQPPVRSPTLARSAV 392
++SAA PPV SP L RS +
Sbjct: 479 SNSAASPPVSSPGLRRSHI 497
>SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 472
Score = 25.4 bits (53), Expect = 5.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 182 FPDENKCDVFWNCW 223
F D N D +WNCW
Sbjct: 350 FADRNFYDDWWNCW 363
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 25.4 bits (53), Expect = 5.2
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 366 SPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTA 500
S A S T P A + T VS+ + AST +EP ++ TP++
Sbjct: 316 SADTAGSPATSPPATADSKTIVSKTISASTTQQTEPLQQT-TPSS 359
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 23.0 bits (47), Expect(2) = 5.5
Identities = 19/63 (30%), Positives = 24/63 (38%)
Frame = +3
Query: 312 SAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSET 491
S T T A + P P L +PK+ S + A P S AP P S
Sbjct: 81 SLPTSSNNTQQAEERP-SMPALGGLFAGGMPKLRHIGKSSASAAPPSAPAPPTPQSELRP 139
Query: 492 PTA 500
PT+
Sbjct: 140 PTS 142
Score = 20.6 bits (41), Expect(2) = 5.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 234 PPAISAAPDLPTTES 278
PP + AP LPT+ +
Sbjct: 73 PPVPTGAPSLPTSSN 87
>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
Mde10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 512
Score = 24.6 bits (51), Expect = 9.0
Identities = 19/70 (27%), Positives = 25/70 (35%)
Frame = +2
Query: 11 DNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTPHCSRLYGIFPD 190
+ V L TCGNG+ D E CD CGE + P C G D
Sbjct: 309 EKSVLRLGTCGNGIVEDG-------EECD------CGEDCENNPCCDGKTCKLTKGSLCD 355
Query: 191 ENKCDVFWNC 220
+ + + C
Sbjct: 356 DQQDACCYQC 365
>SPAC644.15 |rpp101|rpp1-1|60S acidic ribosomal protein
Rpp1-1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 109
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 277 LSVVGKSGAALIAGGFSVPAVPENVALVFIREDA 176
L++ +GAA +AGG + PA + A +E+A
Sbjct: 60 LNIGSGAGAAPVAGGAAAPAAADGEAPAEEKEEA 93
>SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 734
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = +2
Query: 167 RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAY 268
+L G D N C V CWN R + + Y
Sbjct: 93 QLEGTETDTNACTVVVGCWNKWLERVEIVQNIFY 126
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 336 TDSAAQPPVRSPTLARSAVTLIPKIAVNITSV 431
+DSA+ PPV ++ RS V+ P+ I SV
Sbjct: 509 SDSASPPPVPRLSITRSQVSREPEKPEEIPSV 540
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,149,444
Number of Sequences: 5004
Number of extensions: 44166
Number of successful extensions: 190
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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