Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS324A07f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0668 - 5109476-5110112,5110196-5110439,5110519-5110917,511... 34 0.080
04_04_0248 - 23891684-23892064 33 0.11
12_02_0063 + 13098519-13099585,13099759-13099906 33 0.18
12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,272... 32 0.32
04_01_0615 - 8060085-8060972 31 0.56
07_03_0439 + 18212584-18213065,18214164-18215010 31 0.74
09_06_0280 + 22010270-22011407,22011890-22013097 30 1.3
08_02_0819 - 21529913-21530064,21531016-21531082,21531284-215313... 29 1.7
05_03_0458 + 14280953-14281866,14281964-14282912 29 1.7
04_04_1499 - 34006999-34007232,34007371-34007440,34007580-340076... 29 2.3
03_05_1129 - 30595580-30595771,30596119-30597162 29 2.3
11_01_0113 + 881806-881996,882831-882921,883140-883255,884489-88... 29 3.0
04_03_0362 + 14934236-14934541,14935549-14935647,14935736-149357... 29 3.0
02_02_0183 + 7576901-7576908,7577666-7578176 29 3.0
03_06_0648 + 35280492-35280645,35281742-35281820,35282491-352825... 28 4.0
03_02_1009 + 13189349-13189592,13189782-13189882,13191085-131910... 28 4.0
08_02_0110 + 12650328-12650552,12650827-12651423,12651480-126518... 28 5.2
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 28 5.2
01_07_0344 - 42869465-42869502,42869597-42869771,42869923-428701... 28 5.2
01_01_0595 - 4430738-4430785,4430904-4432679 28 5.2
11_04_0320 + 16354122-16354226,16354652-16356859 27 6.9
10_01_0001 - 22485-22526,23308-23436,24346-24473,24801-24862,253... 27 6.9
09_04_0681 + 19416207-19416515,19416537-19416756,19416848-19417455 27 6.9
07_03_0573 + 19614899-19617155,19617384-19617476,19618103-19618125 27 6.9
05_07_0293 + 29031318-29031812,29032096-29032158,29032365-290324... 27 6.9
03_06_0069 - 31449319-31450368 27 6.9
03_01_0092 - 731069-731434,731569-733080 27 6.9
01_06_1281 - 35966121-35966392,35966406-35966574,35966607-35966918 27 6.9
01_05_0652 - 23934604-23934636,23934783-23934893,23935000-239351... 27 6.9
12_02_0589 + 20850249-20850491,20850583-20851839 27 9.1
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 27 9.1
03_06_0316 + 33091194-33091370,33091451-33092155 27 9.1
02_02_0293 - 8639826-8639852,8640161-8640361,8641165-8641611,864... 27 9.1
01_06_0646 - 30832201-30832838,30833643-30833838,30833975-308341... 27 9.1
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 27 9.1
>01_01_0668 -
5109476-5110112,5110196-5110439,5110519-5110917,
5111390-5111668,5111886-5112257,5112371-5112475,
5112832-5112909,5112990-5113199,5113287-5113406,
5113508-5113606,5113685-5113750,5113914-5114141,
5114216-5114521,5115324-5115381
Length = 1066
Score = 33.9 bits (74), Expect = 0.080
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +3
Query: 270 TESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAV---TLIPKIAVNITSVSRA 440
T P + R K QT +A +PP+R A + + T +P + N +SVS
Sbjct: 261 TSPPHKNSHIPRALPPKESSSQTGTAHKPPIRGSAPAETPLPQNTNMPAVPKNGSSVSHD 320
Query: 441 LPASTVAPSEPFSRS 485
P STVA +P + S
Sbjct: 321 RPPSTVAAPKPATSS 335
>04_04_0248 - 23891684-23892064
Length = 126
Score = 33.5 bits (73), Expect = 0.11
Identities = 34/113 (30%), Positives = 45/113 (39%), Gaps = 5/113 (4%)
Frame = +3
Query: 189 MKTSATFSGTAGTEKPPAISAAPDL-PTTESPAS----ACGLIRFRSAKTKK*QTDSAAQ 353
M T TA T PA+ AA + P + A A RFRSA + AA
Sbjct: 1 MATQNRSETTAATRIWPAVVAAARMRPAAATGARMQSVAAAATRFRSAAAAASRMRLAAA 60
Query: 354 PPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTA 512
R A +A+ L+P A T+ PA+ AP P + + P TA
Sbjct: 61 AATRMRPAAAAAMPLLPSAA---TAARMWPPAAKAAPMHPAAATAAPLQSATA 110
>12_02_0063 + 13098519-13099585,13099759-13099906
Length = 404
Score = 32.7 bits (71), Expect = 0.18
Identities = 22/79 (27%), Positives = 34/79 (43%)
Frame = +3
Query: 234 PPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIA 413
PP AA P +P +I + A +K A+PP + + + AV+ P
Sbjct: 183 PPPYPAAQAAPQAPAPPRQVPVITQQQAPPQKRPAAPVAEPPCATKKM-KGAVSAKPMAP 241
Query: 414 VNITSVSRALPASTVAPSE 470
+ + S A P VAPS+
Sbjct: 242 QSSVTASAAPPRCAVAPSQ 260
>12_01_0357 +
2720860-2721066,2721169-2721384,2721481-2723608,
2723699-2724124,2724242-2724546,2724660-2724823,
2724899-2724980
Length = 1175
Score = 31.9 bits (69), Expect = 0.32
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +3
Query: 174 TASSLMKTSATFSGT-AGTEKPPAI-SAAPDLPTTESPASACGLIRFRSAKTKK*QTDSA 347
T SS+M++SAT GT A + P A+ SA P P T +P + S T + TDSA
Sbjct: 152 TDSSMMQSSAT--GTQAAVQGPSAVASAVPMTPVTAAPTTV------PSTTTARAGTDSA 203
Query: 348 AQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEP 473
T S V + P + V T+ S+ +AP P
Sbjct: 204 IAVASAGSTTV-STVAVAPSLPVAPTAASQ---GQALAPQTP 241
>04_01_0615 - 8060085-8060972
Length = 295
Score = 31.1 bits (67), Expect = 0.56
Identities = 20/79 (25%), Positives = 34/79 (43%)
Frame = +3
Query: 237 PAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAV 416
P +A P LP++ A+ + S+ QP V +P+ S + +
Sbjct: 70 PLATAPPSLPSSLFAATVEETVMTASSPLPLPHPAEVLQPLVAAPSSQMSFASKAAAVLP 129
Query: 417 NITSVSRALPASTVAPSEP 473
+T+V ALP + PS+P
Sbjct: 130 CLTTVGPALPGAPSTPSQP 148
>07_03_0439 + 18212584-18213065,18214164-18215010
Length = 442
Score = 30.7 bits (66), Expect = 0.74
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +3
Query: 111 LSAERGHSLSPQSPLLTVR-DCTASSLMKTSATFSGT---AGTEKPPAISAAPDLPTTES 278
L+A H + P SP ++ D + +A S T A + PP+ ++A L T
Sbjct: 15 LAATSWHCVHPPSPTVSTHWDAASHEARGAAAASSPTSPRAASTNPPSATSAEPLHTCVF 74
Query: 279 PASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLAR 383
S G R + Q A+P + +P LAR
Sbjct: 75 SGSVAGPSRQAALSYLTTQPSRMARPLLAAPHLAR 109
>09_06_0280 + 22010270-22011407,22011890-22013097
Length = 781
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +2
Query: 320 NEEVANGFGCPAPGEVSNAGSFSRHAH----PEDCRKYYIC 430
N + AN + CP PGE + S +++ ++ R Y+C
Sbjct: 275 NNQAANNWSCPTPGEARRSACISNNSYCHNVTDNYRSGYVC 315
>08_02_0819 -
21529913-21530064,21531016-21531082,21531284-21531373,
21531506-21531622,21532026-21532145,21532313-21533581
Length = 604
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +3
Query: 126 GHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPAS 287
G + +PQ+ +VR CT+ SL + SA GTA T + A SA +T S +S
Sbjct: 47 GGTPAPQAAASSVRRCTSPSLSRASAA-EGTASTNR--AQSAERRRSSTPSSSS 97
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 29.5 bits (63), Expect = 1.7
Identities = 33/130 (25%), Positives = 45/130 (34%), Gaps = 3/130 (2%)
Frame = +3
Query: 114 SAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPP--AISAAPDLPTTESPAS 287
+A S P SP + R+ S S S T T P S+ P++ P
Sbjct: 10 TASASSSYGPTSPPSSCRNAAPSPPSSNSTPTSSTTPTVPPSLTTTSSPSSSPSSPPPLP 69
Query: 288 ACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSR-ALPASTVAP 464
T + PP SPT + SA +L P S S+ + P S P
Sbjct: 70 PLQPTPPPLPPTTLSCSSHPTPPPPPSPTTSPSASSLPPVPTPRSASSSKCSAPTSAQTP 129
Query: 465 SEPFSRSETP 494
+ S S P
Sbjct: 130 TRFLSSSSPP 139
>04_04_1499 -
34006999-34007232,34007371-34007440,34007580-34007637,
34007940-34007979,34008183-34008259,34008366-34008582,
34008703-34009266
Length = 419
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 113 ECGERTQLEPPISTPHCSRLYGIF 184
+ GERT L PP H R++G+F
Sbjct: 144 DSGERTPLPPPSQQQHQDRIHGLF 167
>03_05_1129 - 30595580-30595771,30596119-30597162
Length = 411
Score = 29.1 bits (62), Expect = 2.3
Identities = 30/80 (37%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = +3
Query: 276 SPASACGLIRFRSAKTKK*QTDSA-AQPPVRSPTLARSAVTLIPK-IAVNITSVSRALPA 449
SP+ A L R + T + + A A PP S AR VTL P+ +A T+ + A P
Sbjct: 175 SPSGAWSLRDVRGSPTGSIEVELASAAPPEASGVEARCVVTLHPEALATEFTARNAASP- 233
Query: 450 STVAPSEPFS---RSETPTA 500
S VA S S R TP A
Sbjct: 234 SPVALSAAVSTHLRVSTPDA 253
>11_01_0113 +
881806-881996,882831-882921,883140-883255,884489-885260
Length = 389
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 119 RTQRCEGSRSSRSSIWNLWRRKRDR 45
R RC G ++RS+ LWRR+R R
Sbjct: 20 RVSRCSGRPATRSAPSILWRRRRPR 44
>04_03_0362 +
14934236-14934541,14935549-14935647,14935736-14935798,
14935878-14935940,14937242-14937362,14937472-14937872,
14937968-14938141,14938252-14938570,14938659-14938735,
14938808-14938877,14938951-14939007,14939100-14939314,
14939436-14939561,14939649-14939944,14940032-14940203,
14940300-14940398,14940471-14940602,14940692-14940792,
14941391-14941580,14941819-14941842
Length = 1034
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = +2
Query: 218 CWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGFGCPAPGEVSNAGSFSRHA 397
CW G + RY+CSP VCM ++P + + P EV + G H
Sbjct: 77 CWRGLSRRYKCSPERTV---LSVCMLTGEMPRVQTSRLGKN-----PIEVDSDGGEDLHV 128
Query: 398 HPE 406
E
Sbjct: 129 DYE 131
>02_02_0183 + 7576901-7576908,7577666-7578176
Length = 172
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 143 GAQAVSSLRTQRCEGSRSSRSSIWNLWRRKRDRCRR 36
G V + +R EG S + W WRR+R RC R
Sbjct: 108 GGGGVGWMGMRRAEGGGSGSVARWRRWRRRR-RCGR 142
>03_06_0648 +
35280492-35280645,35281742-35281820,35282491-35282593,
35282695-35282815,35283144-35283232,35283324-35283473,
35285842-35287161
Length = 671
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Frame = +3
Query: 48 VSLSTPQIPNXXXXXXXXXXXLSAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGT 227
+ S+P +PN AER +LS Q+P+++ + S M S G
Sbjct: 290 IGRSSPSVPNPPLGPR------GAERSSNLSSQTPVISSSGLSYGSGMHVGNANSRVNGN 343
Query: 228 EKPPAISAAP---DLPTTE 275
P + P D+P TE
Sbjct: 344 SVQPTVELLPSFKDVPNTE 362
>03_02_1009 +
13189349-13189592,13189782-13189882,13191085-13191090,
13191712-13191933,13192052-13192137,13192330-13192426,
13192817-13192909,13193031-13193186
Length = 334
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 111 LSAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDL 263
L RG SP P T+S SAT +GT G + PP + + PD+
Sbjct: 33 LGLSRGAGPSPPPP---PSSSTSSFPAAASATAAGTGG-DAPPIVGSCPDM 79
>08_02_0110 +
12650328-12650552,12650827-12651423,12651480-12651857,
12651997-12652218,12652407-12652483,12652553-12652631,
12652920-12653105
Length = 587
Score = 27.9 bits (59), Expect = 5.2
Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 1/80 (1%)
Frame = +3
Query: 192 KTSATFSGTAGTEKPPAISAAPDL-PTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRS 368
K T GT++PP I +P P SP + I S + +PPV S
Sbjct: 191 KNDIELGSTDGTDRPPRIPVSPSRPPVVASPRDS--PIASPSRPEPPVASPPGPEPPVAS 248
Query: 369 PTLARSAVTLIPKIAVNITS 428
P + V P + + S
Sbjct: 249 PPVPEPQVASPPVLEPPVAS 268
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/52 (26%), Positives = 19/52 (36%)
Frame = +2
Query: 350 PAPGEVSNAGSFSRHAHPEDCRKYYICLEGVAREYGCPIGTVFKIGDADGTG 505
PAPG + A H+HP C+ +C G +G G G
Sbjct: 9 PAPG-LLRAACLRSHSHPLQCKALELCFNVALNRLPASAGASPLLGHGHGVG 59
>01_07_0344 -
42869465-42869502,42869597-42869771,42869923-42870117,
42870678-42870788,42870899-42871111,42871551-42871658,
42871732-42871873,42872150-42873449,42874032-42874085,
42874491-42874923
Length = 922
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -2
Query: 496 VGVSDLEN--GSDGATVLAGNALETDVIFTAIFGMSVTAERASVGD 365
+G +D +N GS + N +E+D + +A+ GM++++ RA G+
Sbjct: 274 LGATDKKNNVGSSSFNCSSPNIIESDDLVSALSGMNLSSSRAMNGN 319
>01_01_0595 - 4430738-4430785,4430904-4432679
Length = 607
Score = 27.9 bits (59), Expect = 5.2
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Frame = +3
Query: 234 PPAISAAPDLPTTE-----SPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVT- 395
PP A+P +PTT+ PA+A S + A QPP +P ++AV+
Sbjct: 113 PPDSGASPSVPTTKRVDTLPPAAADKAAISPSIPVPVRKRVHAPQPP-PAPAPEKAAVSP 171
Query: 396 LIPKIAVNITSVSRALPASTVAPSEPF 476
IP A S + A A+ +P PF
Sbjct: 172 SIPVPAKKRVSATAAAAATDASPRVPF 198
>11_04_0320 + 16354122-16354226,16354652-16356859
Length = 770
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +2
Query: 368 SNAGSFSRHAHPEDCRKYYICLEGVAREYGCPIGTVFKIG 487
S AG H D K C+E V YGC I ++G
Sbjct: 505 SYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLG 544
>10_01_0001 -
22485-22526,23308-23436,24346-24473,24801-24862,
25388-25585,25807-25898,26941-26994
Length = 234
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +2
Query: 2 WKCDNGVAELKTCGNGLAFDATDSKYLTEN-CDYLHNVECGERTQLEPPIS 151
W C G E CG + A ++ + C Y + CG +L+PP S
Sbjct: 9 WACTGGSQEA-ICGPEASKLAIAVPTISSSSCSYFYRYRCGRYEELKPPSS 58
>09_04_0681 + 19416207-19416515,19416537-19416756,19416848-19417455
Length = 378
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 207 FSGTAGTEKPPAISAAPDLPTTESPAS 287
F+G AG PPA+S +P +P S
Sbjct: 334 FAGAAGFHAPPAVSVRSVIPVCAAPPS 360
>07_03_0573 + 19614899-19617155,19617384-19617476,19618103-19618125
Length = 790
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/55 (38%), Positives = 24/55 (43%)
Frame = +3
Query: 117 AERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESP 281
AER LS PLL SSL T+ + PPA S A L TT +P
Sbjct: 11 AERSSRLSHSRPLLRRAGSACSSLTTTTTSQHRHGRRRAPPAESNA--LTTTAAP 63
>05_07_0293 +
29031318-29031812,29032096-29032158,29032365-29032490,
29032783-29032911,29033161-29033311,29033853-29033962,
29034502-29034607,29034697-29034894,29034988-29035030,
29035129-29035207
Length = 499
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -3
Query: 507 LPVPSASPILKTVPMGQPYSRATPSRQM*YLRQSSG*A*RLNEPALETSPGAGQP 343
+ P+ASP+L +P+ P S P R + R+ R P L P A P
Sbjct: 1 MATPAASPLLLPLPLPLPASTFPPRRAVPCARRLVLRPPRAGRPRLRDPPPAAPP 55
>03_06_0069 - 31449319-31450368
Length = 349
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 174 TASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPAS 287
+A S + +A S T G + PP AAP++ PA+
Sbjct: 296 SALSSVSAAAPTSNTVGMDLPPVSLAAPEMQYWNGPAA 333
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +3
Query: 201 ATFSGTAGTEKPPAISAAPDLPTTESPASACGL--IRFRSAKTKK*QTDSAAQPP 359
A A T +PP +S AP PA+ GL +R ++ AA PP
Sbjct: 45 ALHGAAAATARPPPVSLAPAPVAVAPPATPAGLSALRVHASPPPPPVKQHAAPPP 99
>01_06_1281 - 35966121-35966392,35966406-35966574,35966607-35966918
Length = 250
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = -1
Query: 155 EWRLGAQAVSSLRTQRC---EGSRSSRSSIWNLWR 60
+WR + LR+QRC EG RS + +WR
Sbjct: 156 KWRRSGRCQRGLRSQRCTAREGFRSKEEMLGIVWR 190
>01_05_0652 -
23934604-23934636,23934783-23934893,23935000-23935188,
23935893-23936012,23936109-23936273,23936638-23936790,
23936867-23936976,23937280-23937397,23938197-23938427,
23938984-23939175,23939661-23939945,23940637-23940686,
23940846-23940921,23941048-23941135,23941689-23941771,
23941883-23942248,23942462-23942476,23942909-23943018,
23943134-23943231,23943961-23944019
Length = 883
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 201 ATFSGTAGTEKPPAISAAPDLPTTESPASACGL 299
A SGTA T P S+AP P+T +P A +
Sbjct: 489 ANSSGTANTAGPSP-SSAPSTPSTHTPGDAMSM 520
>12_02_0589 + 20850249-20850491,20850583-20851839
Length = 499
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -1
Query: 134 AVSSLRTQRCEGSRSSRSSIWNLWRRKRDRCRRFSVRLHRC 12
A SSL T S S R ++ +WR+ R+ R+FS ++C
Sbjct: 270 AYSSLLT--LYASLSDRGNLDRVWRKMRETFRKFSDTEYKC 308
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +3
Query: 147 SPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASA 290
SPLL++R T ++ + +SA F G PA+SAA S A+A
Sbjct: 28 SPLLSIRTGTGTARLPSSAVFGGFT-----PALSAAHSRARFVSSATA 70
>03_06_0316 + 33091194-33091370,33091451-33092155
Length = 293
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/85 (23%), Positives = 33/85 (38%)
Frame = +3
Query: 261 LPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRA 440
LP T +PA+A + +A K + +AA+P + A++ + A
Sbjct: 121 LPPTRAPAAAKPKAKPAAAAKPKPKPKAAAKPKAAAKPKAKAPAKSKAAAKPKAAAKPAA 180
Query: 441 LPASTVAPSEPFSRSETPTALVTAK 515
P + P P + P A AK
Sbjct: 181 KPKAAAKPKSPAKPAAKPKAAPKAK 205
>02_02_0293 -
8639826-8639852,8640161-8640361,8641165-8641611,
8641726-8641816,8642949-8643949
Length = 588
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3
Query: 399 IPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKTP 521
IP I N+T V R AST A S ++ T + TP
Sbjct: 434 IPDIEPNLTMVERVTFASTAAASMELVANKNTTRIAYINTP 474
>01_06_0646 -
30832201-30832838,30833643-30833838,30833975-30834126,
30834258-30834303,30834992-30835216,30835374-30835414,
30835705-30835834,30835951-30836019,30836254-30836307,
30836389-30836547,30836854-30836991,30837079-30837141,
30837225-30837264,30837369-30837415,30838062-30838373
Length = 769
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 198 SATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRS-AKTKK*QTDSAAQPP 359
SA G+ EKP S A + +P+ + L+ FRS ++ KK + A+PP
Sbjct: 690 SADDHGSPQREKPRTTSTAGGVKRDVAPSWSSRLLAFRSFSRDKKAKATVDARPP 744
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 27.1 bits (57), Expect = 9.1
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Frame = +3
Query: 198 SATFSGTAGTEKPPAISAAPDLPTTESPASACGL--IRFRSAKTKK*QTDS---AAQPPV 362
+A +G + +PPA + PD + ESPA GL A ++ + QPPV
Sbjct: 53 AAATNGGSHISQPPA-ALPPDFDSGESPAETPGLPPAGVEDAPPRRSPREKPCPTMQPPV 111
Query: 363 RSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPT 497
+ P + P+ V S +L APS S ++TP+
Sbjct: 112 KPP--EELSPVGAPRSRVRAMPPSPSLSPPAKAPSH--SHAKTPS 152
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,733,507
Number of Sequences: 37544
Number of extensions: 361679
Number of successful extensions: 1654
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1651
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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