Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS324A03f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 281 3e-77
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 281 4e-77
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 281 4e-77
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 139 3e-34
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 138 5e-34
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 92 5e-20
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 46 5e-06
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 42 7e-05
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 40 2e-04
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 34 0.011
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 34 0.015
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.18
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.32
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 29 0.42
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 28 0.97
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 28 0.97
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 1.3
SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|c... 27 1.7
SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces pomb... 25 5.2
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 25 6.8
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 25 6.8
SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 9.0
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 281 bits (690), Expect = 3e-77
Identities = 130/173 (75%), Positives = 150/173 (86%)
Frame = +2
Query: 2 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
KLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTG
Sbjct: 62 KLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTG 121
Query: 182 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 361
EFEAGISK+GQTREHALLA+TLGVKQLIV VNKMD+T +S+ RFEEI KE S++IKK+
Sbjct: 122 EFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKV 179
Query: 362 GYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 520
G+NP V FVP+SG+ GDNM+EP+T MPW++GWQ E K G GK L+EA+D+
Sbjct: 180 GFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDS 232
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 281 bits (689), Expect = 4e-77
Identities = 129/173 (74%), Positives = 150/173 (86%)
Frame = +2
Query: 2 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
KLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTG
Sbjct: 62 KLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTG 121
Query: 182 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 361
EFEAGISK+GQTREHALLA+TLGVKQLIV VNKMD+T +S+ RFEEI KE S++IKK+
Sbjct: 122 EFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKV 179
Query: 362 GYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 520
G+NP V FVP+SG+ GDNM+EP+T MPW++GWQ E K G GK L+EA+D+
Sbjct: 180 GFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDS 232
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 281 bits (689), Expect = 4e-77
Identities = 129/173 (74%), Positives = 150/173 (86%)
Frame = +2
Query: 2 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
KLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTG
Sbjct: 62 KLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTG 121
Query: 182 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 361
EFEAGISK+GQTREHALLA+TLGVKQLIV VNKMD+T +S+ RFEEI KE S++IKK+
Sbjct: 122 EFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKV 179
Query: 362 GYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 520
G+NP V FVP+SG+ GDNM+EP+T MPW++GWQ E K G GK L+EA+D+
Sbjct: 180 GFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDS 232
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 139 bits (336), Expect = 3e-34
Identities = 73/151 (48%), Positives = 95/151 (62%), Gaps = 3/151 (1%)
Frame = +2
Query: 14 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 193
ER RG+T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V + FE
Sbjct: 236 ERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFER 295
Query: 194 GISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY-IKKIGYN 370
G +NGQTREHA L LG+ +++V VNK+D +SE RF+EIK VS + IK +G+
Sbjct: 296 GFLENGQTREHAYLLRALGISEIVVSVNKLDLMS--WSEDRFQEIKNIVSDFLIKMVGFK 353
Query: 371 PAAVAFVPISGWHGDNML--EPSTKMPWFKG 457
+ V FVPIS G N++ + S W+KG
Sbjct: 354 TSNVHFVPISAISGTNLIQKDSSDLYKWYKG 384
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 138 bits (334), Expect = 5e-34
Identities = 64/152 (42%), Positives = 101/152 (66%), Gaps = 4/152 (2%)
Frame = +2
Query: 14 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 193
ERE+G T+++ FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFEA
Sbjct: 297 EREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEA 356
Query: 194 GISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI-GYN 370
G + GQTREHA+LA T G+ L+V +NKMD +SE R++E ++S +++++ GYN
Sbjct: 357 GFERGGQTREHAVLARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYN 416
Query: 371 PAA-VAFVPISGWHGDNMLE--PSTKMPWFKG 457
V ++P+S + G N+ + S+ PW++G
Sbjct: 417 SKTDVKYMPVSAYTGQNVKDRVDSSVCPWYQG 448
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 91.9 bits (218), Expect = 5e-20
Identities = 49/116 (42%), Positives = 71/116 (61%)
Frame = +2
Query: 2 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
K E+ RGITI A ++ET+ + +D PGH D+IKNMITG + D A+++V+A G
Sbjct: 93 KAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDG 152
Query: 182 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 349
+ QTREH LLA +GVKQ++V +NK+D EP E E+++ +S Y
Sbjct: 153 QMP-------QTREHLLLARQVGVKQIVVYINKVDMVEPDMIELVEMEMRELLSEY 201
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 45.6 bits (103), Expect = 5e-06
Identities = 34/94 (36%), Positives = 47/94 (50%)
Frame = +2
Query: 5 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 184
L AER+RGITI+ A F + +ID PGH DF + + D AV I+ +
Sbjct: 71 LPAERQRGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAII-----D 125
Query: 185 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 286
AG+ QT+ A G+ ++I VNKMD
Sbjct: 126 GSAGV--EAQTKVVWKQATKRGIPKVIF-VNKMD 156
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 41.5 bits (93), Expect = 7e-05
Identities = 23/93 (24%), Positives = 42/93 (45%)
Frame = +2
Query: 74 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 253
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 254 KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI 352
K +I+ NK+D +E ++ I K + +
Sbjct: 163 KHIIILQNKVDLIRESAAEEHYQSILKFIKGTV 195
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 39.9 bits (89), Expect = 2e-04
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +2
Query: 2 KLKAERERGITIDIA----LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 169
KL+ ER RGIT+ ++ + Y + +ID PGH DF ++ + + +L+V
Sbjct: 97 KLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVD 156
Query: 170 AGTG 181
A G
Sbjct: 157 ASQG 160
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 34.3 bits (75), Expect = 0.011
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2
Query: 56 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 226
FE S Y + IID PGH DF + D AVL++ A +G I+ + Q R +
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 33.9 bits (74), Expect = 0.015
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 26 GITIDIALWK--FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
GIT I + F+ ++T +D PGH F G + AD VL+VA G
Sbjct: 203 GITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.3 bits (65), Expect = 0.18
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 71 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.32
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 83 IIDAPGHRDFIKNMITGTSQADCAVLIV 166
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 29.1 bits (62), Expect = 0.42
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +2
Query: 2 KLKAER-ERGITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 121
K++A+ E+ + I+I + E +++ T+ID PG DFI N
Sbjct: 61 KVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 0.97
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 71 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 166
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 0.97
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 71 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 166
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 27.5 bits (58), Expect = 1.3
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +2
Query: 14 ERERGITID-----IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 166
ERER ++I +A+ + + ID PGH DF+ + + +D VL+V
Sbjct: 185 ERERVMSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 367
Score = 27.1 bits (57), Expect = 1.7
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 303 TVSPDLRKSRRKYPHTSRRLATTQLL---SLSCPFLDGTETTCWSLQPKCLGSRDGRWSV 473
+ +PD+ ++PHT +R +T + L LSC + +E + P G +D + +
Sbjct: 145 STNPDVLYMSSQHPHTQQRYSTLKRLMVRCLSCEYSTLSEASDSMSNPLFFGDQDNGYVI 204
Query: 474 RKA 482
++
Sbjct: 205 SQS 207
>SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 347
Score = 25.4 bits (53), Expect = 5.2
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +2
Query: 281 MDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWF 451
+D +P + F IKK+V Y+ ++ + P + G N LEP TK PW+
Sbjct: 107 LDLKKPLLPQILFGNIKKDV--YLDQV-HRPRHYRGSGSAPLFG-NFLEPLTKTPWY 159
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 25.0 bits (52), Expect = 6.8
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2
Query: 332 KEVS---SYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 457
KEVS SYI +P +G+ +N+++P + P FKG
Sbjct: 159 KEVSTSKSYISSGYLHPKTSPIFKKNGYATENVVDPISSSPRFKG 203
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 399 LDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENASLK 509
LD + W++QP C + DG A L++NA LK
Sbjct: 149 LDKLKDRLWNVQPTCALTGDGLLE-GLAWLSQNAKLK 184
>SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 96
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 130 CDHVLDEISVSRSINDGNIVLASFEL 53
CDH+L IS SR G + FEL
Sbjct: 23 CDHLLQYISNSRDSKAGLKIFLVFEL 48
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,229,626
Number of Sequences: 5004
Number of extensions: 46996
Number of successful extensions: 178
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 171
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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