Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS324A03f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 311 2e-85
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 311 2e-85
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 142 3e-63
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 177 4e-45
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 157 6e-39
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 157 6e-39
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 144 3e-35
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 85 3e-17
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 85 3e-17
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 83 2e-16
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 83 2e-16
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 83 2e-16
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 44 7e-05
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 44 9e-05
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 38 0.003
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.006
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 38 0.006
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.094
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.22
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 31 0.38
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 31 0.38
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 0.38
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 0.38
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 0.87
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 1.5
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 1.5
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 1.5
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 1.5
AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical ... 29 2.0
AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical ... 29 2.0
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 27 6.2
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 311 bits (764), Expect = 2e-85
Identities = 146/173 (84%), Positives = 156/173 (90%)
Frame = +2
Query: 2 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
KLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTG
Sbjct: 62 KLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTG 121
Query: 182 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 361
EFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKI
Sbjct: 122 EFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKI 181
Query: 362 GYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 520
GYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD+
Sbjct: 182 GYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDS 234
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 311 bits (764), Expect = 2e-85
Identities = 146/173 (84%), Positives = 156/173 (90%)
Frame = +2
Query: 2 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
KLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTG
Sbjct: 62 KLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTG 121
Query: 182 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 361
EFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKI
Sbjct: 122 EFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKI 181
Query: 362 GYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 520
GYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD+
Sbjct: 182 GYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDS 234
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 142 bits (343), Expect(2) = 3e-63
Identities = 64/87 (73%), Positives = 72/87 (82%)
Frame = +2
Query: 260 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 439
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 440 MPWFKGWQVERKEGKADGKCLIEALDA 520
MPWFKGW VERKEG A GK L+EALD+
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEALDS 200
Score = 117 bits (282), Expect(2) = 3e-63
Identities = 53/56 (94%), Positives = 56/56 (100%)
Frame = +2
Query: 2 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 169
KLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 62 KLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 177 bits (431), Expect = 4e-45
Identities = 88/111 (79%), Positives = 95/111 (85%)
Frame = +2
Query: 2 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
KLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTG
Sbjct: 62 KLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTG 121
Query: 182 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKK 334
EFEAGISKNGQTREHALLA TLGVKQL V+ T P S R + I++
Sbjct: 122 EFEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR 169
Score = 44.4 bits (100), Expect = 5e-05
Identities = 27/66 (40%), Positives = 32/66 (48%)
Frame = +3
Query: 324 KSRRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENAS 503
+S + P +SRR T Q L D TETTC C GSRDG + RK L E S
Sbjct: 152 RSPTRSPDSSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSRDGLLNARKETLPERPS 211
Query: 504 LKLSMP 521
+L P
Sbjct: 212 SRLLTP 217
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 157 bits (380), Expect = 6e-39
Identities = 81/170 (47%), Positives = 116/170 (68%), Gaps = 1/170 (0%)
Frame = +2
Query: 14 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 193
ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE
Sbjct: 229 ERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFET 288
Query: 194 GISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYN 370
G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++
Sbjct: 289 GFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFS 346
Query: 371 PAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 520
FVP+SG+ G+N+++ ++ W+ DG CL+E +D+
Sbjct: 347 KP--KFVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDS 381
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 157 bits (380), Expect = 6e-39
Identities = 81/170 (47%), Positives = 116/170 (68%), Gaps = 1/170 (0%)
Frame = +2
Query: 14 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 193
ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE
Sbjct: 247 ERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFET 306
Query: 194 GISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYN 370
G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++
Sbjct: 307 GFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFS 364
Query: 371 PAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 520
FVP+SG+ G+N+++ ++ W+ DG CL+E +D+
Sbjct: 365 KP--KFVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDS 399
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 144 bits (349), Expect = 3e-35
Identities = 67/151 (44%), Positives = 101/151 (66%), Gaps = 3/151 (1%)
Frame = +2
Query: 14 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 193
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE
Sbjct: 168 EREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFET 227
Query: 194 GISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNP 373
G + GQTREH++L T GVK L++ VNKMD + E RF+EI+ +++ +++K+G+NP
Sbjct: 228 GFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNP 287
Query: 374 AA-VAFVPISGWHGDNMLEPST--KMPWFKG 457
+ +VP SG G + + T + W+ G
Sbjct: 288 KTDITYVPCSGLTGAFIKDRPTGSEGNWYSG 318
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 85.0 bits (201), Expect = 3e-17
Identities = 51/130 (39%), Positives = 72/130 (55%)
Frame = +2
Query: 2 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
K K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 85 KGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDG 144
Query: 182 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 361
E QT+EH +LA +GVK + + +NK D E E + ++ E +
Sbjct: 145 VME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLH 193
Query: 362 GYNPAAVAFV 391
G+N A +
Sbjct: 194 GFNGDATPVI 203
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 85.0 bits (201), Expect = 3e-17
Identities = 51/130 (39%), Positives = 72/130 (55%)
Frame = +2
Query: 2 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
K K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 85 KGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDG 144
Query: 182 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 361
E QT+EH +LA +GVK + + +NK D E E + ++ E +
Sbjct: 145 VME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLH 193
Query: 362 GYNPAAVAFV 391
G+N A +
Sbjct: 194 GFNGDATPVI 203
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 82.6 bits (195), Expect = 2e-16
Identities = 50/120 (41%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Frame = +2
Query: 14 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 193
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 93 EKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP- 151
Query: 194 GISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 367
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 152 ------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 82.6 bits (195), Expect = 2e-16
Identities = 50/120 (41%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Frame = +2
Query: 14 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 193
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 94 EKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP- 152
Query: 194 GISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 367
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 153 ------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 82.6 bits (195), Expect = 2e-16
Identities = 50/120 (41%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Frame = +2
Query: 14 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 193
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 94 EKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP- 152
Query: 194 GISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 367
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 153 ------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 48.8 bits (111), Expect = 2e-06
Identities = 33/95 (34%), Positives = 46/95 (48%)
Frame = +2
Query: 2 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
KL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 79 KLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
Query: 182 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 286
QT + LAF + Q+I +NK+D
Sbjct: 139 -------VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 44.0 bits (99), Expect = 7e-05
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +2
Query: 77 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 256
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 257 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY--NPAAVAFVPISGWHGDNMLE 427
++I+ +NK D E + + E K+V +K +G N V G+ + ML+
Sbjct: 127 RVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDENSPIVEMSLADGYFKEEMLQ 181
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 43.6 bits (98), Expect = 9e-05
Identities = 34/88 (38%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +2
Query: 26 GITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 202
GIT I + E +K VT +D PGH F G AD VL+VAA G E
Sbjct: 188 GITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE---- 243
Query: 203 KNGQTREHALLAFTLGVKQLIVGVNKMD 286
QT + A V QL+V VNK+D
Sbjct: 244 ---QTAQSIKFAKDANV-QLVVAVNKID 267
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 38.3 bits (85), Expect = 0.003
Identities = 31/91 (34%), Positives = 40/91 (43%)
Frame = +2
Query: 14 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 193
ER+RGITI A + + IID PGH DF + D AVL++ G G
Sbjct: 93 ERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG---- 147
Query: 194 GISKNGQTREHALLAFTLGVKQLIVGVNKMD 286
G+ T L + + I VNKMD
Sbjct: 148 GVQSQTFTVNRQLARYNV---PFICFVNKMD 175
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.5 bits (83), Expect = 0.006
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +2
Query: 74 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 253
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 254 KQLIVGVNKMDSTEPPYSEPRFEEI 328
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 37.5 bits (83), Expect = 0.006
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 5 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
L ERERGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 68 LDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.094
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 279 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 151
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.3 bits (70), Expect = 0.22
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +2
Query: 83 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 262
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 263 IVGVNKMDSTEPPYSEPR 316
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 31.5 bits (68), Expect = 0.38
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 14 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 166
E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 64 EQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 31.5 bits (68), Expect = 0.38
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 14 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 166
E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 64 EQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 31.5 bits (68), Expect = 0.38
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +2
Query: 14 ERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 178
E++RG +I I + Y + IID PGH +F M AD V++V A
Sbjct: 177 EKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHE 236
Query: 179 G 181
G
Sbjct: 237 G 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 31.5 bits (68), Expect = 0.38
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +2
Query: 14 ERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 178
E++RG +I I + Y + IID PGH +F M AD V++V A
Sbjct: 52 EKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHE 111
Query: 179 G 181
G
Sbjct: 112 G 112
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.3 bits (65), Expect = 0.87
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 32 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 32 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 342 PHTSRRLATTQLLSLSCPFLD 404
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 342 PHTSRRLATTQLLSLSCPFLD 404
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 342 PHTSRRLATTQLLSLSCPFLD 404
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 342 PHTSRRLATTQLLSLSCPFLD 404
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical
protein B0205.1b protein.
Length = 720
Score = 29.1 bits (62), Expect = 2.0
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Frame = +2
Query: 107 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 274
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 445 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 504
Query: 275 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH-GDNML 424
D EP P EP +EEI + Y + + P + PI H +
Sbjct: 505 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVHLEEPKF 564
Query: 425 EPSTKMPWFKGWQVER 472
+P + M +G +R
Sbjct: 565 DPISSMNIGRGTLAQR 580
>AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical
protein B0205.1a protein.
Length = 745
Score = 29.1 bits (62), Expect = 2.0
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Frame = +2
Query: 107 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 274
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 470 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 529
Query: 275 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH-GDNML 424
D EP P EP +EEI + Y + + P + PI H +
Sbjct: 530 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVHLEEPKF 589
Query: 425 EPSTKMPWFKGWQVER 472
+P + M +G +R
Sbjct: 590 DPISSMNIGRGTLAQR 605
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 77 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 172
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 27.5 bits (58), Expect = 6.2
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = -2
Query: 262 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 104
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 103 VSRSINDGNI 74
S S +D I
Sbjct: 84 FSGSKSDAEI 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,422,767
Number of Sequences: 27780
Number of extensions: 263501
Number of successful extensions: 834
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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