BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS323H12f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 74 1e-15
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 53 2e-09
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 46 2e-07
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 41 9e-06
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 39 3e-05
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 38 6e-05
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 37 1e-04
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 34 8e-04
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 28 0.067
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 73.7 bits (173), Expect = 1e-15
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Frame = -2
Query: 508 YPCNACNKIXKKKFELNRHIKHHHLQQKN-FVCDKCNAMFFSKRGLVDHIARHEGAEMFS 332
Y C C K +K H++ H + ++ + C+ C F L H H G + +
Sbjct: 62 YQCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRTHTGEKPYQ 121
Query: 331 CDICGKSFSRLRTLKEHXRMXENDXRYQCKVCKRXFMQKGGLKNHVRLH 185
C+ C KSFS L H R+ + Y+C VC+R F G L H+R+H
Sbjct: 122 CEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERAFEHSGKLHRHMRIH 170
Score = 73.7 bits (173), Expect = 1e-15
Identities = 34/108 (31%), Positives = 50/108 (46%)
Frame = -2
Query: 508 YPCNACNKIXKKKFELNRHIKHHHLQQKNFVCDKCNAMFFSKRGLVDHIARHEGAEMFSC 329
Y CN C K L RH + H +K + C+ C+ F K L H H + C
Sbjct: 92 YRCNICGKTFAVPARLTRHYRTH-TGEKPYQCEYCSKSFSVKENLSVHRRIHTKERPYKC 150
Query: 328 DICGKSFSRLRTLKEHXRMXENDXRYQCKVCKRXFMQKGGLKNHVRLH 185
D+C ++F L H R+ + ++C VC + F+Q G L H+R H
Sbjct: 151 DVCERAFEHSGKLHRHMRIHTGERPHKCTVCSKTFIQSGQLVIHMRTH 198
Score = 72.5 bits (170), Expect = 2e-15
Identities = 34/111 (30%), Positives = 54/111 (48%)
Frame = -2
Query: 508 YPCNACNKIXKKKFELNRHIKHHHLQQKNFVCDKCNAMFFSKRGLVDHIARHEGAEMFSC 329
+ C C+K + +L H++ H +K +VC C F + L H H G + ++C
Sbjct: 176 HKCTVCSKTFIQSGQLVIHMRTH-TGEKPYVCKACGKGFTCSKQLKVHTRTHTGEKPYTC 234
Query: 328 DICGKSFSRLRTLKEHXRMXENDXRYQCKVCKRXFMQKGGLKNHVRLHQDN 176
DICGKSF LK H + Y+C +C F K ++ H++ H D+
Sbjct: 235 DICGKSFGYNHVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELHIKTHSDS 285
Score = 67.3 bits (157), Expect = 9e-14
Identities = 32/108 (29%), Positives = 50/108 (46%)
Frame = -2
Query: 508 YPCNACNKIXKKKFELNRHIKHHHLQQKNFVCDKCNAMFFSKRGLVDHIARHEGAEMFSC 329
Y C+ C + + +L+RH++ H ++ C C+ F LV H+ H G + + C
Sbjct: 148 YKCDVCERAFEHSGKLHRHMRIH-TGERPHKCTVCSKTFIQSGQLVIHMRTHTGEKPYVC 206
Query: 328 DICGKSFSRLRTLKEHXRMXENDXRYQCKVCKRXFMQKGGLKNHVRLH 185
CGK F+ + LK H R + Y C +C + F LK H H
Sbjct: 207 KACGKGFTCSKQLKVHTRTHTGEKPYTCDICGKSFGYNHVLKLHQVAH 254
Score = 64.1 bits (149), Expect = 8e-13
Identities = 33/108 (30%), Positives = 46/108 (42%)
Frame = -2
Query: 508 YPCNACNKIXKKKFELNRHIKHHHLQQKNFVCDKCNAMFFSKRGLVDHIARHEGAEMFSC 329
Y C C+K K L+ H + H +++ + CD C F L H+ H G C
Sbjct: 120 YQCEYCSKSFSVKENLSVH-RRIHTKERPYKCDVCERAFEHSGKLHRHMRIHTGERPHKC 178
Query: 328 DICGKSFSRLRTLKEHXRMXENDXRYQCKVCKRXFMQKGGLKNHVRLH 185
+C K+F + L H R + Y CK C + F LK H R H
Sbjct: 179 TVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHTRTH 226
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -2
Query: 511 LYPCNACNKIXKKKFELNRHIKHH 440
+Y C C++ K + HIK H
Sbjct: 259 VYKCTLCHETFGSKKTMELHIKTH 282
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 53.2 bits (122), Expect = 2e-09
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = -2
Query: 355 HEGAEMFSCDICGKSFSRLRTLKEHXRMXENDXRYQCKVCKRXFMQKGGLKNHVRLH 185
H G + F C C K F+R LK H R+ + Y C C R F+Q L+ H+R+H
Sbjct: 4 HTGEKPFECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVH 60
Score = 50.0 bits (114), Expect = 1e-08
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = -2
Query: 439 HLQQKNFVCDKCNAMFFSKRGLVDHIARHEGAEMFSCDICGKSFSRLRTLKEHXRMXEND 260
H +K F C +C+ F L H+ H G + + C C + F ++ L+ H R+ +
Sbjct: 4 HTGEKPFECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGE 63
Query: 259 XRYQCKVC 236
Y C++C
Sbjct: 64 RPYACELC 71
Score = 27.1 bits (57), Expect = 0.12
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 277 RMXENDXRYQCKVCKRXFMQKGGLKNHVRLH 185
R + ++C C + F + LK H+RLH
Sbjct: 2 RTHTGEKPFECPECHKRFTRDHHLKTHMRLH 32
Score = 25.4 bits (53), Expect = 0.36
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = -2
Query: 508 YPCNACNKIXKKKFELNRHIKHHHLQQKNFVCDKCNA 398
Y C+ C++ + L RH++ H ++ + C+ C A
Sbjct: 38 YHCSHCDRQFVQVANLRRHLR-VHTGERPYACELCAA 73
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 46.0 bits (104), Expect = 2e-07
Identities = 23/69 (33%), Positives = 33/69 (47%)
Frame = -2
Query: 430 QKNFVCDKCNAMFFSKRGLVDHIARHEGAEMFSCDICGKSFSRLRTLKEHXRMXENDXRY 251
+K+F C C ++ S L HI H C +CGK+FSR L+ H R + +
Sbjct: 14 KKSFSCKYCEKVYVSLGALKMHIRTH--TLPCKCHLCGKAFSRPWLLQGHIRTHTGEKPF 71
Query: 250 QCKVCKRXF 224
C+ C R F
Sbjct: 72 SCQHCNRAF 80
Score = 41.9 bits (94), Expect = 4e-06
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -2
Query: 508 YPCNACNKIXKKKFELNRHIKHHHLQQKNFVCDKCNAMFFSKRGLVD-HIARHEGAEMFS 332
+ C C K+ L HI+ H L K +C K FS+ L+ HI H G + FS
Sbjct: 17 FSCKYCEKVYVSLGALKMHIRTHTLPCKCHLCGKA----FSRPWLLQGHIRTHTGEKPFS 72
Query: 331 CDICGKSFS 305
C C ++F+
Sbjct: 73 CQHCNRAFA 81
Score = 35.9 bits (79), Expect = 3e-04
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -2
Query: 367 HIARHEGA--EMFSCDICGKSFSRLRTLKEHXRMXENDXRYQCKVCKRXFMQKGGLKNHV 194
H A EG + FSC C K + L LK H R + +C +C + F + L+ H+
Sbjct: 5 HCAAAEGQAKKSFSCKYCEKVYVSLGALKMHIR--THTLPCKCHLCGKAFSRPWLLQGHI 62
Query: 193 RLH 185
R H
Sbjct: 63 RTH 65
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 40.7 bits (91), Expect = 9e-06
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -2
Query: 343 EMFSCDICGKSFSRLRTLKEHX--RMXENDXRYQCKVCKRXFMQKGGLKNHV 194
++F+C +CGK +LK H + E Y+C +C+R + + L H+
Sbjct: 4 KLFTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHI 55
Score = 39.5 bits (88), Expect = 2e-05
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -2
Query: 511 LYPCNACNKIXKKKFELNRHIKHHHLQ-QKNFVCDKCNAMFFSKRGLVDHIARHEGAEMF 335
L+ C C K+ K L RH+ H + Q+ + C C ++ S+ L+ HI + +
Sbjct: 5 LFTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTYHKSRPG 64
Query: 334 SCDI 323
DI
Sbjct: 65 DIDI 68
Score = 31.5 bits (68), Expect = 0.005
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -2
Query: 430 QKNFVCDKCNAMFFSKRGLVDHIA-RH-EGAEMFSCDICGKSFSRLRTLKEH 281
+K F C C + SK L H+A +H E E + C IC + + +L H
Sbjct: 3 KKLFTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTH 54
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 39.1 bits (87), Expect = 3e-05
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Frame = -2
Query: 337 FSCDICGKSFSRLRTLKEHXRMXENDXRYQ--CKVCKRXFMQKGGLKNHV----RLHQDN 176
F C+ C K + L L+ H + + C +CKR + L+NH R H N
Sbjct: 3 FRCEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYHRQHSKN 62
Query: 175 LDXFKEFDDVKHLIDNRELTLKQIAAENKKKELAQKQQ 62
KE + ++ + ++ ++ ++++ Q+QQ
Sbjct: 63 EQQRKEMEQMREREREQREHSDRVTSQQQQQQQQQQQQ 100
Score = 35.1 bits (77), Expect = 4e-04
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -2
Query: 508 YPCNACNKIXKKKFELNRHIKHHHLQ-QKNFVCDKCNAMFFSKRGLVDH 365
+ C CNKI L RHI++ H + K +C+ C ++ S L +H
Sbjct: 3 FRCEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNH 51
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 37.9 bits (84), Expect = 6e-05
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = -2
Query: 472 KFELNRHIKHHHLQQKNFVCDKCNAMFFSKRGLVDHIARHEGAEMFSCDICGKSFSRLRT 293
K L H+++H K F C+KC+ +K L H+ H + C C + +
Sbjct: 1 KHHLEYHLRNH-FGSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTYATKYCHS 59
Query: 292 LKEHXR 275
LK H R
Sbjct: 60 LKLHLR 65
Score = 37.1 bits (82), Expect = 1e-04
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = -2
Query: 385 KRGLVDHIARHEGAEMFSCDICGKSFSRLRTLKEHXRMXENDXRYQCKVCKRXFMQKGGL 206
K L H+ H G++ F C+ C S L H + N +Y+C C L
Sbjct: 1 KHHLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTYATKYCHSL 60
Query: 205 KNHVR 191
K H+R
Sbjct: 61 KLHLR 65
Score = 23.4 bits (48), Expect = 1.4
Identities = 9/38 (23%), Positives = 18/38 (47%)
Frame = -2
Query: 292 LKEHXRMXENDXRYQCKVCKRXFMQKGGLKNHVRLHQD 179
L+ H R ++C+ C + K L +H++ H +
Sbjct: 4 LEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSN 41
Score = 22.2 bits (45), Expect = 3.3
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -2
Query: 508 YPCNACNKIXKKKFELNRHIKHH 440
+ C C+ K LN H+K H
Sbjct: 17 FKCEKCSYSCVNKSMLNSHLKSH 39
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 37.1 bits (82), Expect = 1e-04
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -2
Query: 514 ILYPCNACNKIXKKKFELNRHIKHHHLQQKN-FVCDKCNAMFFSKRGLVDH 365
+ Y C+ C K K L RH + H Q N VC C+ +F + L +H
Sbjct: 370 VCYTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNH 420
Score = 36.3 bits (80), Expect = 2e-04
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -2
Query: 337 FSCDICGKSFSRLRTLKEHXRMXENDXRYQ--CKVCKRXFMQKGGLKNHVRLH 185
++CD+CGK+ S TLK H C +C + F L NH ++
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNHKSIY 424
Score = 24.2 bits (50), Expect = 0.82
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -2
Query: 502 CNACNKIXKKKFELNRHIKHHHLQQK 425
C C+K+ + LN H +H +QK
Sbjct: 404 CALCHKVFRTLNSLNNHKSIYHRRQK 429
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 34.3 bits (75), Expect = 8e-04
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -2
Query: 331 CDICGKSFSRLRTLKEHX--RMXENDXRYQCKVCKRXFMQKGGLKNHVRL 188
C C ++FS +LK H + ++D Y C+ C R + K L H L
Sbjct: 8 CPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSL 57
Score = 33.1 bits (72), Expect = 0.002
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -2
Query: 502 CNACNKIXKKKFELNRHIKHHHLQQKN-FVCDKCNAMFFSKRGLVDHIA-RHEGA 344
C C + + L RH + H Q +VC+ CN + +K L H + +H G+
Sbjct: 8 CPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQHRGS 62
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = -2
Query: 511 LYPCNACNKIXKKKFELNRHIKHHH 437
LY C CN+ + K L H H
Sbjct: 35 LYVCEFCNRRYRTKNSLTTHKSLQH 59
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 27.9 bits (59), Expect = 0.067
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = -2
Query: 460 NRHIKH--HH--LQQKNFVCDKCNAMFFSKRGLVDHI 362
N H+ H HH L F+C++ +F R VDH+
Sbjct: 278 NHHVHHANHHAILGHSGFLCERHQKRYFFGRDSVDHV 314
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,936
Number of Sequences: 438
Number of extensions: 1559
Number of successful extensions: 42
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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