Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323H11f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55376-5|AAA98007.1|  501|Caenorhabditis elegans Hypothetical pr...    30   1.2  
AF036694-8|AAB88346.2|  607|Caenorhabditis elegans Hypothetical ...    29   2.0  
AF026204-7|AAB71247.1|  272|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p...    28   3.5  
Z32683-1|CAA83621.1|  812|Caenorhabditis elegans Hypothetical pr...    28   3.5  
AF022973-9|AAC25802.2| 1373|Caenorhabditis elegans Hypothetical ...    27   8.1  

>U55376-5|AAA98007.1|  501|Caenorhabditis elegans Hypothetical
           protein F16H11.1 protein.
          Length = 501

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = -2

Query: 340 KSLTDDVSKILYFCEILSFIEFGTFAINSSYILLILEVSILNSS 209
           KS T +  K+L+F   +   +FG  ++  S++ LI E+S + +S
Sbjct: 136 KSTTSEWLKVLWFVPFIMVFQFGWASVQISHLALIPELSSVPAS 179


>AF036694-8|AAB88346.2|  607|Caenorhabditis elegans Hypothetical
           protein CD4.8 protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
 Frame = +3

Query: 72  LIDHWEFIAKLYKDVLFEENYQ--SYTLSAKLFSITSEV-------RTRKRKKVYEELSI 224
           LIDH    ++ YK+V+ EEN Q  +Y  S +L S   EV       R  K + ++E  + 
Sbjct: 368 LIDH----SQEYKEVMMEENNQPTTYVKSLQLDSDDDEVQYIGAMKRQSKPEPIFEGFAP 423

Query: 225 ETSKIKRMYEEFIAKVPNSIKERISQKYNILDTSS 329
             S    + EE    VP   +++IS   N   TS+
Sbjct: 424 HNSNSDHVQEEQKTGVPLFDRQQISLSANNGATSA 458


>AF026204-7|AAB71247.1|  272|Caenorhabditis elegans Hypothetical
           protein C30E1.2 protein.
          Length = 272

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +3

Query: 6   LNCVSNKRRKIMSLVIKQGNCCLIDHWEFIAKL-YKDVLFEENYQSYTLS 152
           L C+SN    +  L++  G C +  ++  I K+ ++   F+++Y  YT++
Sbjct: 141 LPCISNSLLYVAILLVASGQCQIYLYYYIIQKIRFERKSFKKSYMFYTVT 190


>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical
           protein F54D5.14 protein.
          Length = 1130

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
 Frame = +3

Query: 15  VSNKRRKIMSLVIKQGNCCLIDHWEFIAKLYKDVLFE-ENYQSYTLSAKLFSITSEVRTR 191
           + N + ++  L+ KQGN  L      +   YKD+  + EN +    SAKL      V T 
Sbjct: 368 IVNAKNEVRILLEKQGNQDLTKRLTKVENDYKDISQQRENMELGGESAKLREKLDTVITD 427

Query: 192 KRKKVYEELSI--ETSKIKRMYEE 257
            ++K  E+ +I  + ++++R  E+
Sbjct: 428 YKRKEEEKYTIQRDINQLRRKIEQ 451


>Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
           protein F54D5.14 protein.
          Length = 1130

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
 Frame = +3

Query: 15  VSNKRRKIMSLVIKQGNCCLIDHWEFIAKLYKDVLFE-ENYQSYTLSAKLFSITSEVRTR 191
           + N + ++  L+ KQGN  L      +   YKD+  + EN +    SAKL      V T 
Sbjct: 368 IVNAKNEVRILLEKQGNQDLTKRLTKVENDYKDISQQRENMELGGESAKLREKLDTVITD 427

Query: 192 KRKKVYEELSI--ETSKIKRMYEE 257
            ++K  E+ +I  + ++++R  E+
Sbjct: 428 YKRKEEEKYTIQRDINQLRRKIEQ 451


>Z32683-1|CAA83621.1|  812|Caenorhabditis elegans Hypothetical
           protein R07E5.1 protein.
          Length = 812

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
 Frame = +3

Query: 87  EFIAKLYKDVLFEENYQSYTL---SAKLFSITSEVRTRKRKKVYEELSIETSKIKRMYEE 257
           E I +  +D +  E+   Y +   S K  +   E   +KRK  +E  +   S I +M+E+
Sbjct: 80  EQIKQRAEDFMDAEDLGEYGIGNRSIKQTAAFGEGAGQKRKMAWERDTTSISTITQMFED 139

Query: 258 FIAKVPNSIKERI 296
            +  V NSI  R+
Sbjct: 140 VVKPVSNSIGVRM 152


>AF022973-9|AAC25802.2| 1373|Caenorhabditis elegans Hypothetical
            protein F25G6.9 protein.
          Length = 1373

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/66 (21%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = +3

Query: 126  ENYQSYTLSAKLFSITSEVRTRKRKKVYEELS-IETSKIKRMYEEFIAKVPNSIKERISQ 302
            E Y +  +SAK F +   +   ++ + YEE   ++   I++ +   I+     +KE    
Sbjct: 894  EAYGASQMSAKAFEVAYNIVIDEKTEKYEETELVDDESIEKFFNGLISSPKKDLKEIEQN 953

Query: 303  KYNILD 320
               +L+
Sbjct: 954  NKKVLE 959


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,172,842
Number of Sequences: 27780
Number of extensions: 188936
Number of successful extensions: 543
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)