Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS323H10f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68318-8|CAH10783.1| 465|Caenorhabditis elegans Hypothetical pr... 190 5e-49
Z68318-2|CAA92692.1| 434|Caenorhabditis elegans Hypothetical pr... 189 9e-49
Z68318-3|CAD57704.1| 337|Caenorhabditis elegans Hypothetical pr... 179 1e-45
Z81527-14|CAB04278.2| 506|Caenorhabditis elegans Hypothetical p... 28 4.7
Z79753-8|CAB02089.2| 506|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z48783-2|CAC42295.1| 805|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z48783-1|CAA88701.1| 780|Caenorhabditis elegans Hypothetical pr... 27 8.1
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 27 8.1
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 27 8.1
CU457740-4|CAM36334.1| 735|Caenorhabditis elegans Hypothetical ... 27 8.1
AL032631-9|CAA21575.2| 893|Caenorhabditis elegans Hypothetical ... 27 8.1
AF233652-1|AAF63475.1| 780|Caenorhabditis elegans RFX-type tran... 27 8.1
AF226156-1|AAF61564.1| 805|Caenorhabditis elegans RFX-like tran... 27 8.1
AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z68318-8|CAH10783.1| 465|Caenorhabditis elegans Hypothetical
protein T21B10.2c protein.
Length = 465
Score = 190 bits (463), Expect = 5e-49
Identities = 94/149 (63%), Positives = 111/149 (74%)
Frame = +2
Query: 74 KMVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHG 253
+M I I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD K+ + G
Sbjct: 31 RMPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLG 90
Query: 254 KGVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLXXX 433
KGVL A+ NINE IAP L +VT Q++ID+ M+ LDG+ENK LGANAILGVSL
Sbjct: 91 KGVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILGVSLAVA 150
Query: 434 XXXXXXXNVPLYKHLADLAGNNDIVLPVP 520
+PLYK++A+LAG +VLPVP
Sbjct: 151 KAGAVHKGLPLYKYIAELAGTGKVVLPVP 179
>Z68318-2|CAA92692.1| 434|Caenorhabditis elegans Hypothetical
protein T21B10.2a protein.
Length = 434
Score = 189 bits (461), Expect = 9e-49
Identities = 94/148 (63%), Positives = 110/148 (74%)
Frame = +2
Query: 77 MVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGK 256
M I I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD K+ + GK
Sbjct: 1 MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLGK 60
Query: 257 GVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLXXXX 436
GVL A+ NINE IAP L +VT Q++ID+ M+ LDG+ENK LGANAILGVSL
Sbjct: 61 GVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILGVSLAVAK 120
Query: 437 XXXXXXNVPLYKHLADLAGNNDIVLPVP 520
+PLYK++A+LAG +VLPVP
Sbjct: 121 AGAVHKGLPLYKYIAELAGTGKVVLPVP 148
>Z68318-3|CAD57704.1| 337|Caenorhabditis elegans Hypothetical
protein T21B10.2b protein.
Length = 337
Score = 179 bits (436), Expect = 1e-45
Identities = 90/143 (62%), Positives = 105/143 (73%)
Frame = +2
Query: 77 MVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGK 256
M I I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD K+ + GK
Sbjct: 1 MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLGK 60
Query: 257 GVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLXXXX 436
GVL A+ NINE IAP L +VT Q++ID+ M+ LDG+ENK LGANAILGVSL
Sbjct: 61 GVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILGVSLAVAK 120
Query: 437 XXXXXXNVPLYKHLADLAGNNDI 505
+PLYK++A+LAG I
Sbjct: 121 AGAVHKGLPLYKYIAELAGTGKI 143
>Z81527-14|CAB04278.2| 506|Caenorhabditis elegans Hypothetical
protein F35E12.8 protein.
Length = 506
Score = 27.9 bits (59), Expect = 4.7
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -2
Query: 196 GGTRGYSCPEQAKLCYQINFHCRVATRVKD 107
GGT + A+ + IN+HC++ +++D
Sbjct: 35 GGTGTFPPDSAARFQFPINYHCKIQFKIQD 64
>Z79753-8|CAB02089.2| 506|Caenorhabditis elegans Hypothetical
protein F35E12.8 protein.
Length = 506
Score = 27.9 bits (59), Expect = 4.7
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -2
Query: 196 GGTRGYSCPEQAKLCYQINFHCRVATRVKD 107
GGT + A+ + IN+HC++ +++D
Sbjct: 35 GGTGTFPPDSAARFQFPINYHCKIQFKIQD 64
>Z48783-2|CAC42295.1| 805|Caenorhabditis elegans Hypothetical
protein F33H1.1b protein.
Length = 805
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -2
Query: 343 LSLLGYFKVGFGKFRSNEFIDIFD-CGQNSLAMIFTLDVISQFKSFMNTSGGTRGYSCPE 167
++ +G+ K+G G+ N IDI++ + LA+I +D S ++ G G
Sbjct: 467 MATIGFRKLGVGEEELNSLIDIYEILCREILALIKNIDFASVEDTWSKFWSGNFGVDRDH 526
Query: 166 QAKLC 152
+ LC
Sbjct: 527 ISALC 531
>Z48783-1|CAA88701.1| 780|Caenorhabditis elegans Hypothetical
protein F33H1.1a protein.
Length = 780
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -2
Query: 343 LSLLGYFKVGFGKFRSNEFIDIFD-CGQNSLAMIFTLDVISQFKSFMNTSGGTRGYSCPE 167
++ +G+ K+G G+ N IDI++ + LA+I +D S ++ G G
Sbjct: 442 MATIGFRKLGVGEEELNSLIDIYEILCREILALIKNIDFASVEDTWSKFWSGNFGVDRDH 501
Query: 166 QAKLC 152
+ LC
Sbjct: 502 ISALC 506
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +2
Query: 50 LRKSSSVLKMVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRD 229
+RK SSVL +K I A Q+ ++ VDL L L + A + E +
Sbjct: 292 IRKCSSVLNKFLKGIDALQLEGNQSTDWTRVDLNEVLKLMEDLIEYFAQPNDEQDFEEKQ 351
Query: 230 N 232
N
Sbjct: 352 N 352
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +2
Query: 50 LRKSSSVLKMVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRD 229
+RK SSVL +K I A Q+ ++ VDL L L + A + E +
Sbjct: 413 IRKCSSVLNKFLKGIDALQLEGNQSTDWTRVDLNEVLKLMEDLIEYFAQPNDEQDFEEKQ 472
Query: 230 N 232
N
Sbjct: 473 N 473
>CU457740-4|CAM36334.1| 735|Caenorhabditis elegans Hypothetical
protein C50E10.4 protein.
Length = 735
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 198 VEAPEGTAARNKPSSVTRSTSTVGLPRESKI*RALID 88
VE PE + S RSTS V P + ++ AL D
Sbjct: 17 VEPPEAVKGNERDKSTRRSTSQVVRPEKHEVENALED 53
>AL032631-9|CAA21575.2| 893|Caenorhabditis elegans Hypothetical
protein Y106G6H.7 protein.
Length = 893
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 230 NIKSEYHG-KGVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLD 370
N + H + L +K++ EL +L K E QQ+ + E+M KL+
Sbjct: 94 NCRERIHNVRNALHTVKSLLELRRDDLKKLWHENAQQKSVCEIMAKLE 141
>AF233652-1|AAF63475.1| 780|Caenorhabditis elegans RFX-type
transcription factor DAF-19 short variant protein.
Length = 780
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -2
Query: 343 LSLLGYFKVGFGKFRSNEFIDIFD-CGQNSLAMIFTLDVISQFKSFMNTSGGTRGYSCPE 167
++ +G+ K+G G+ N IDI++ + LA+I +D S ++ G G
Sbjct: 442 MATIGFRKLGVGEEELNSLIDIYEILCREILALIKNIDFASVEDTWSKFWSGNFGVDRDH 501
Query: 166 QAKLC 152
+ LC
Sbjct: 502 ISALC 506
>AF226156-1|AAF61564.1| 805|Caenorhabditis elegans RFX-like
transcription factor DAF-19 protein.
Length = 805
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -2
Query: 343 LSLLGYFKVGFGKFRSNEFIDIFD-CGQNSLAMIFTLDVISQFKSFMNTSGGTRGYSCPE 167
++ +G+ K+G G+ N IDI++ + LA+I +D S ++ G G
Sbjct: 467 MATIGFRKLGVGEEELNSLIDIYEILCREILALIKNIDFASVEDTWSKFWSGNFGVDRDH 526
Query: 166 QAKLC 152
+ LC
Sbjct: 527 ISALC 531
>AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical
protein F59D6.2 protein.
Length = 380
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 206 EHQWRHQRVQLPGTSQALLPD 144
++ W HQ LP +S A LPD
Sbjct: 286 QYDWNHQAYTLPCSSTATLPD 306
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,412,359
Number of Sequences: 27780
Number of extensions: 185601
Number of successful extensions: 542
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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