Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323H08f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0032 + 14112354-14112417,14112471-14112549,14114435-141145...    30   1.3  
01_05_0274 - 20293963-20294065,20294501-20294560,20295006-202950...    27   6.9  

>02_03_0032 +
           14112354-14112417,14112471-14112549,14114435-14114551,
           14114721-14114802,14115734-14115868,14115948-14116123,
           14116219-14116370,14116433-14117622
          Length = 664

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -1

Query: 200 KIIVW*FVNNFIHFVYCLQFKSKYLS 123
           K + W FVN+++    CLQ+K +Y++
Sbjct: 208 KQVAWNFVNDWLKTTLCLQYKPQYIA 233


>01_05_0274 -
           20293963-20294065,20294501-20294560,20295006-20295052,
           20296065-20296155,20296276-20296427,20296891-20297049,
           20297132-20297381,20298255-20298317,20298394-20298566
          Length = 365

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 172 LLTNYHTIILLSFNHHHAINLNLIV*SATDH 264
           +L  Y    L SFNHHH    + +  +AT H
Sbjct: 106 ILAFYQGPELKSFNHHHLFRTSTVYAAATSH 136


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,930,673
Number of Sequences: 37544
Number of extensions: 150118
Number of successful extensions: 233
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)