Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323H08f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81513-8|CAB04181.1|  354|Caenorhabditis elegans Hypothetical pr...    29   1.5  
AF003386-4|AAO38631.1|  452|Caenorhabditis elegans Hypothetical ...    29   2.7  
AF003386-3|AAO38630.1|  499|Caenorhabditis elegans Hypothetical ...    29   2.7  
AF000266-5|AAC71172.1|  370|Caenorhabditis elegans Hypothetical ...    29   2.7  
AF000266-4|ABB51177.1|  403|Caenorhabditis elegans Hypothetical ...    29   2.7  
AC024755-1|AAF59637.2|  369|Caenorhabditis elegans Hypothetical ...    28   3.5  
Z68159-4|CAA92285.1|  323|Caenorhabditis elegans Hypothetical pr...    27   6.2  

>Z81513-8|CAB04181.1|  354|Caenorhabditis elegans Hypothetical
           protein F26D2.11 protein.
          Length = 354

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = -3

Query: 426 NIWFSFH*TGLRSLVPRRFCGQLIKYITR*SYRLVLIYTYIFSFCYMYILLYFIMVC 256
           +IWF      +RSLV R      I  +T+  Y L +I T I  F +    LY+  +C
Sbjct: 117 SIWFGVAIAVIRSLVMRYPVNNRINRLTQVEYSLKIIIT-ITMFAFPIWALYYTKLC 172


>AF003386-4|AAO38631.1|  452|Caenorhabditis elegans Hypothetical
           protein F59E12.6b protein.
          Length = 452

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 11/41 (26%), Positives = 26/41 (63%)
 Frame = +3

Query: 354 LLIDHKTAEALNYAVQFNEMKTKYSQCLHI*TNHSKNIKTS 476
           +L++  + E LNYA+Q+N+   K+++ L+      + +K++
Sbjct: 60  VLLNFTSMEYLNYALQYNKKNLKHAELLYTIVGTFRELKSA 100


>AF003386-3|AAO38630.1|  499|Caenorhabditis elegans Hypothetical
           protein F59E12.6a protein.
          Length = 499

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 11/41 (26%), Positives = 26/41 (63%)
 Frame = +3

Query: 354 LLIDHKTAEALNYAVQFNEMKTKYSQCLHI*TNHSKNIKTS 476
           +L++  + E LNYA+Q+N+   K+++ L+      + +K++
Sbjct: 107 VLLNFTSMEYLNYALQYNKKNLKHAELLYTIVGTFRELKSA 147


>AF000266-5|AAC71172.1|  370|Caenorhabditis elegans Hypothetical
           protein W08F4.8a protein.
          Length = 370

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = +3

Query: 372 TAEALNYAVQFNE--MKTKYSQCLHI 443
           T EALN A+ FNE  MKT   QC+ I
Sbjct: 190 TIEALNAAIDFNEEKMKTMAEQCIII 215


>AF000266-4|ABB51177.1|  403|Caenorhabditis elegans Hypothetical
           protein W08F4.8b protein.
          Length = 403

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = +3

Query: 372 TAEALNYAVQFNE--MKTKYSQCLHI 443
           T EALN A+ FNE  MKT   QC+ I
Sbjct: 223 TIEALNAAIDFNEEKMKTMAEQCIII 248


>AC024755-1|AAF59637.2|  369|Caenorhabditis elegans Hypothetical
           protein Y34B4A.7 protein.
          Length = 369

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 10/20 (50%), Positives = 17/20 (85%), Gaps = 1/20 (5%)
 Frame = -3

Query: 315 YTYIFSFC-YMYILLYFIMV 259
           + +IFSFC +MY++LYF ++
Sbjct: 31  FAFIFSFCIFMYLVLYFYVL 50


>Z68159-4|CAA92285.1|  323|Caenorhabditis elegans Hypothetical
           protein C33D9.4 protein.
          Length = 323

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -3

Query: 333 YRLVLIYTYIFSFCYMYILLYFIMV 259
           ++L+ I TYIF++C + +  Y  ++
Sbjct: 101 FKLIFISTYIFNYCILMLPFYISLI 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,856,984
Number of Sequences: 27780
Number of extensions: 176892
Number of successful extensions: 466
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)