Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS323H06f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 56 4e-09
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 50 2e-07
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 48 1e-06
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 47 1e-06
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 47 2e-06
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 46 3e-06
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 42 4e-05
SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces... 42 6e-05
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 42 6e-05
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 42 7e-05
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 41 1e-04
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 40 3e-04
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 40 3e-04
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 39 4e-04
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 37 0.002
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 34 0.015
SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family... 29 0.32
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 29 0.42
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 29 0.56
SPAC10F6.06 |vip1||RNA-binding protein Vip1|Schizosaccharomyces ... 28 0.97
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 28 0.97
SPAC823.09c |||L-asparaginase |Schizosaccharomyces pombe|chr 1||... 26 3.9
SPAC1039.06 |||alanine racemase |Schizosaccharomyces pombe|chr 1... 25 5.2
SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|c... 25 5.2
SPBC36.01c |||spermidine family transporter |Schizosaccharomyces... 25 5.2
SPBC18A7.02c |||seven transmembrane receptor-like protein|Schizo... 25 5.2
SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr 2|... 25 6.8
SPBP8B7.09c |||karyopherin|Schizosaccharomyces pombe|chr 2|||Manual 25 6.8
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 25 6.8
SPBC2G2.09c |crs1|mug17|meiosis specific cyclin Crs1|Schizosacch... 25 9.0
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 25 9.0
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 55.6 bits (128), Expect = 4e-09
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 5/148 (3%)
Frame = +2
Query: 2 KMSTKVAVVTGANKGIGFAIVR-GLCKRFNGTVYLTSRDEERGKIAVETLKNEGLNPSYH 178
K + ++TG++KG+G+A+V+ GL + +N V SR + I +E K L
Sbjct: 2 KSTFSTVLITGSSKGLGYALVKVGLAQGYN--VIACSRAPDT--ITIEHSKLLKL----- 52
Query: 179 QLDITNKKSVE-SFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLYVNFFSLT 355
+LD+T+ KSVE +F+D K ++ +DI+INNA + + + VNF+ +
Sbjct: 53 KLDVTDVKSVETAFKD-AKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVA 111
Query: 356 STCEILFPIVK---NGGRVINVSSSAGH 430
+ +++ GGR++ +SS AG+
Sbjct: 112 YITKEALNLMRESGKGGRILQISSVAGY 139
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 50.0 bits (114), Expect = 2e-07
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 4/151 (2%)
Frame = +2
Query: 2 KMSTKVAVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEER-GKIAVETLKNEGLNPSYH 178
++ K ++TGA+ GIG + + K + L +R +IA E ++
Sbjct: 3 RLDGKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPL 62
Query: 179 QLDITNKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLY-VNFFSLT 355
+LD+++ KS+ + + ++ ID+LINNA +A + + + T+ N +
Sbjct: 63 KLDVSDLKSIPGVIESLPKEFADIDVLINNAGLALGTDKVIDLNIDDAVTMITTNVLGMM 122
Query: 356 STCEILFPIV--KNGGRVINVSSSAGHLSRI 442
+ + PI KN G ++NV S AG S +
Sbjct: 123 AMTRAVLPIFYSKNKGDILNVGSIAGRESYV 153
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 47.6 bits (108), Expect = 1e-06
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Frame = +2
Query: 5 MSTKVAVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEERGKIAVETLKNEGLNPS--YH 178
++ KVA+VTG++ GIG+ L ++ VYL R+EE+ + ++ + +E + +
Sbjct: 40 LTGKVALVTGSSGGIGYVTALELARK-GAKVYLAGRNEEKYQKVMKQIHDEVRHSKIRFL 98
Query: 179 QLDITNKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLYVNFFSLTS 358
+LD+ + +SV + K E + IL+NNA I E E + N+ S
Sbjct: 99 RLDLLDFESVYQAAESFIAKEEKLHILVNNAGI--MNPPFELTKDGYELQIQTNYLSHYL 156
Query: 359 TCEILFPIVK 388
E+L P ++
Sbjct: 157 FTELLLPTLR 166
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 47.2 bits (107), Expect = 1e-06
Identities = 27/90 (30%), Positives = 46/90 (51%)
Frame = +2
Query: 8 STKVAVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEERGKIAVETLKNEGLNPSYHQLD 187
+ KV + G N+GIG ++V+ L R TV+ ++R E E K+ N +LD
Sbjct: 4 TNKVYFIAGGNRGIGLSLVKELSSREGTTVFASARKPEAATELQEWSKSHP-NVKTVELD 62
Query: 188 ITNKKSVESFRDYIKTKYEGIDILINNAAI 277
+T+++S + +GID+L N+ I
Sbjct: 63 VTSQQSANEAAQSVAKAVDGIDVLWLNSGI 92
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 46.8 bits (106), Expect = 2e-06
Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 3/131 (2%)
Frame = +2
Query: 14 KVAVVTGANKGIGFAIVRGLCKRFNGTV--YLTSRDEERG-KIAVETLKNEGLNPSYHQL 184
K VV GA KGIGF+I + + YLT+ E+ K+A ET G+ ++
Sbjct: 22 KNCVVFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTEKAKKLAEET----GVQVHTLKI 77
Query: 185 DITNKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLYVNFFSLTSTC 364
DI+ +VE+ + I+ ++ I +++ NA + F+++ + + E+ + +N S+
Sbjct: 78 DISRSDTVEAGVEEIQKIFKEIHVVVANAGMPFRRSVLDSPPHEFEKVMNINTNSVYRVA 137
Query: 365 EILFPIVKNGG 397
+ I K G
Sbjct: 138 YYMGKIFKKQG 148
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 46.4 bits (105), Expect = 3e-06
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 5/151 (3%)
Frame = +2
Query: 2 KMSTKVAVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEER--GKIAVETLKNEGLNPSY 175
K++ K ++TG + GIG A + R + ++ EER ++ + ++ EG N
Sbjct: 39 KLAEKKTLLTGGDSGIGKAAAV-MFAREGSDLVISCLPEERDDAEVTRDLIEREGRNCWI 97
Query: 176 HQLDITNKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQ---TLYVNFF 346
+ + + D+ K ID+L+NN IA++Q A + EQ T N F
Sbjct: 98 WEGKLDKSDNCRDLVDFALKKLGWIDVLVNN--IAYQQVAQSIEDIDDEQWDLTFKTNIF 155
Query: 347 SLTSTCEILFPIVKNGGRVINVSSSAGHLSR 439
S + +K+G ++N SS ++ R
Sbjct: 156 SFFWVTKAAISHMKSGSSIVNCSSINAYVGR 186
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 42.3 bits (95), Expect = 4e-05
Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Frame = +2
Query: 8 STKVAVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEERGKIAVETLKNEGLNPSYHQLD 187
+ K+ + G N+GIG ++V+ L R V+ ++R E E K+ N +LD
Sbjct: 4 TNKIYFIAGGNRGIGLSLVKELSNREGTVVFASARKPEAATELQEWSKSHS-NVHIIKLD 62
Query: 188 ITNKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLY-VNFFSLTSTC 364
I++ +S + +D+L N+ I N + Y N
Sbjct: 63 ISSLESANEAAQEVAKAVGKVDVLWVNSGIFHSFNTVLNTPDDVWNSHYKTNVLGPIHVY 122
Query: 365 EILFPIVKNGGRVINVSSSA 424
+ +P+VK G I V +S+
Sbjct: 123 QAFYPLVKKGESKIIVFTSS 142
>SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 338
Score = 41.9 bits (94), Expect = 6e-05
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Frame = +2
Query: 14 KVAVVTGANKGIGFAIVRGLCKRFNG---------TVYLTSRDEERGKIAVETLK----N 154
K A++TG+N G+GF I L + + TV LT R E+ + A LK +
Sbjct: 5 KYALITGSNSGLGFGIATRLLQFYQPRLQDEPEVFTVILTCRSREKAEDACRRLKEFFPD 64
Query: 155 EGLNPSYHQLDITNKKSVESFRDYIKTKYEGIDILINNA 271
+ Y LD++N SVE+ I T++ +D + NA
Sbjct: 65 RKIRLEYVLLDLSNMASVEAAVQDIATRFPKLDFVYLNA 103
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 41.9 bits (94), Expect = 6e-05
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 2/148 (1%)
Frame = +2
Query: 14 KVAVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEERGKIAVETLKNEGLNPSYHQLDIT 193
K AVV G +GIG AI + ++ K A E + G+ + D+T
Sbjct: 22 KNAVVFGGARGIGHAICSVFAEA-GANAFIVYNTTPGEKAAKEIAQANGVKTYTCKCDVT 80
Query: 194 NKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLYVNFFSLTSTCEIL 373
K VE I+ ++ IDI++ N I ++A + + + VN + +
Sbjct: 81 IPKEVEHAFAEIQKVFDTIDIVVPNNGICTGKSAIDMTYEEFANEINVNLLGVFNVAHNA 140
Query: 374 FPIV-KNG-GRVINVSSSAGHLSRIPSE 451
PI K G G ++ +S +G + +P +
Sbjct: 141 GPIFQKQGHGSLVATASMSGVVVNVPQQ 168
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 41.5 bits (93), Expect = 7e-05
Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 4/150 (2%)
Frame = +2
Query: 14 KVAVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEERGKIAVETLKNEGLNPSYHQLDIT 193
K ++TG + GIGF+I + + L R+++ + A E G+ + I
Sbjct: 10 KTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALEYAAELRDKHGVQAKAYSCPIE 69
Query: 194 NKKSV-ESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQA-EQTLYVNFFSLTSTCE 367
N+ +V E+ ++ +D++I NA IA + E + + +N T +
Sbjct: 70 NRSAVIETTNQAVEELGGRLDVMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYYTAQ 129
Query: 368 IL-FPIVKNG-GRVINVSSSAGHLSRIPSE 451
K G G +I +S +GH++ P +
Sbjct: 130 AAGHHFKKQGKGSLIFTASMSGHIANWPQQ 159
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 40.7 bits (91), Expect = 1e-04
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 1/140 (0%)
Frame = +2
Query: 8 STKVAVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEERGKIAVETLKNEGLNPSYHQLD 187
+ K+ + G N+GIG ++V+ L R GTV S + ++ N +LD
Sbjct: 4 TNKIYFIAGGNRGIGLSLVKELSNR-KGTVVFASARKPGAATKLQEWSKSHSNVHIIKLD 62
Query: 188 ITNKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLY-VNFFSLTSTC 364
+++ +S + + +D+L N+A+ + Y N
Sbjct: 63 VSSLESANEAAQEVTKVVDAVDVLWVNSAVFHSFGPVVNTPDDVWNSHYKTNVLGPIHVY 122
Query: 365 EILFPIVKNGGRVINVSSSA 424
+ +P++K G I V +S+
Sbjct: 123 QAFYPLIKKGRSKIIVFTSS 142
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 39.5 bits (88), Expect = 3e-04
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +2
Query: 179 QLDITNKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLYVNFFSLTS 358
QLD+ N S++ + + + ID+L+NNA + Q N F
Sbjct: 20 QLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGALE 79
Query: 359 TCEILFPIVK--NGGRVINVSSSAGHLS 436
+ + PI + + G +INVSS G ++
Sbjct: 80 VIKAITPIFRSQHNGMIINVSSIGGKMT 107
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 39.5 bits (88), Expect = 3e-04
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +2
Query: 179 QLDITNKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLYVNFFSLTS 358
QLD+ N S++ + + + ID+L+NNA + Q N F
Sbjct: 20 QLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGALE 79
Query: 359 TCEILFPIVK--NGGRVINVSSSAGHLS 436
+ + PI + + G +INVSS G ++
Sbjct: 80 VIKAITPIFRSQHNGMIINVSSIGGKMT 107
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 39.1 bits (87), Expect = 4e-04
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 2/139 (1%)
Frame = +2
Query: 14 KVAVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEERGKIAVETLKNEGLNPSYHQLDIT 193
KV ++TG++KGIG A L K+ S E +ETL + + H
Sbjct: 7 KVILLTGSSKGIGLATAEALQKKAKVIAVSRSLTPE-----LETLLIQNPDSFVHVKGDV 61
Query: 194 NKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLY-VNFFSLTSTCEI 370
+ S IK K+ +D +I NA + + + L+ +NFFS+ T +
Sbjct: 62 TEVGKASIETAIK-KFGKLDSVILNAGVLEPIAKIADADINEWRKLFDINFFSVVETVKY 120
Query: 371 LFP-IVKNGGRVINVSSSA 424
P + K G ++ VSS A
Sbjct: 121 AIPHLRKTKGTIVIVSSGA 139
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 37.1 bits (82), Expect = 0.002
Identities = 23/88 (26%), Positives = 44/88 (50%)
Frame = +2
Query: 17 VAVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEERGKIAVETLKNEGLNPSYHQLDITN 196
V V+ G N+GIG ++V+ L + TV+ ++R + K N +LD+T+
Sbjct: 8 VYVIVGGNRGIGLSLVKELSNKEGVTVFASARGPGSASELKDWSKTHS-NVHIIKLDVTS 66
Query: 197 KKSVESFRDYIKTKYEGIDILINNAAIA 280
+S + ++ + ID+L N+ I+
Sbjct: 67 LRSAKDAAMQVEKVVKCIDVLWVNSGIS 94
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 33.9 bits (74), Expect = 0.015
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 4/144 (2%)
Frame = +2
Query: 14 KVAVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEERGKIAVETLKNEGLNPSYHQLDIT 193
+V ++TGA GIG + LCK F D G V+ K + + Q D++
Sbjct: 6 RVVLITGAAGGIG----KVLCKMFTEL-----GDRVAGIDIVDPSKVQDAALAL-QADVS 55
Query: 194 NKKSVESFRDYIKTKYEGIDILINNAAIA----FKQNATEPVAVQAEQTLYVNFFSLTST 361
+E+ + + ID+LINNA +A F+Q + E L N+ +
Sbjct: 56 KADQIETAIEKVIQTLGPIDVLINNAGLADDTPFEQLSHESWDHDVSLVLRGNYLTQRYV 115
Query: 362 CEILFPIVKNGGRVINVSSSAGHL 433
+ K GG ++N+ S GH+
Sbjct: 116 IPHMAKQGK-GGSIVNIGSVNGHI 138
>SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 29.5 bits (63), Expect = 0.32
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +2
Query: 185 DITNKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLYVNFFSLTSTC 364
+IT K VE +K LIN AAIA K + + ++ N +
Sbjct: 86 NITKDKDVEGCVHSLKKMNRTPFALINAAAIAPKNHLLSISRQELQKCFETNVIGQLAIT 145
Query: 365 EILFPIVKN--GGRVINVSSSAGHLS 436
LFP++ V+N++SS + S
Sbjct: 146 SALFPLLLQDPNPHVVNIASSLAYFS 171
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 29.1 bits (62), Expect = 0.42
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 119 ERGKIAVETLKNEGLNP-SYHQLDITNKKSVESFRDYIKTKYE 244
E KIA+ T E P + H+LDIT+ E+ + Y K K++
Sbjct: 246 ENAKIAILTCPFEPPKPKTKHKLDITSVSEFEALQAYEKEKFQ 288
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 28.7 bits (61), Expect = 0.56
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +2
Query: 23 VVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEERGKIAVETLK----NEGLNPSYHQLDI 190
+VTG ++G+G AI + L R V + +R + + AV L +E S+ +D+
Sbjct: 26 LVTGGSQGLGKAIAKELVLR-GANVTIVARTVTKLQEAVAELSDSKIHEDQQVSFESVDL 84
Query: 191 TNKKSVES 214
T+ +SV S
Sbjct: 85 TSYESVHS 92
>SPAC10F6.06 |vip1||RNA-binding protein Vip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 257
Score = 27.9 bits (59), Expect = 0.97
Identities = 15/49 (30%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +2
Query: 107 SRDEERGKIAVETLKNEGLNPSYHQLDITNKKSVESFRDY-IKTKYEGI 250
+R E++ + A+ + E L+ YH D+T +KS++ + Y + +K++GI
Sbjct: 93 ARQEDKPRSAIIS---ELLSRGYHLSDVTLEKSIQLDQSYGVSSKFKGI 138
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 27.9 bits (59), Expect = 0.97
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 6/128 (4%)
Frame = +2
Query: 20 AVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEERGKIAVETLKNEGLNPSYHQLDITNK 199
AVVTGA GIG L V ++ E+ +A E + +D T K
Sbjct: 60 AVVTGATDGIGKEYATQLAMSGFNVVLISRTQEKLDALAKELETVAKVKTRTIAIDYT-K 118
Query: 200 KSVESF----RDYIKTKYEGIDILINNAAIA--FKQNATEPVAVQAEQTLYVNFFSLTST 361
+ E+F +D + T I +LINN + + E + + +++N F T
Sbjct: 119 TTAETFEKLHQDLVGTP---ITVLINNVGQSHYMPTSFAETTVKEMDDIMHINCFGTLHT 175
Query: 362 CEILFPIV 385
+ + I+
Sbjct: 176 TKAVLSIM 183
>SPAC823.09c |||L-asparaginase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 285
Score = 25.8 bits (54), Expect = 3.9
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 9/116 (7%)
Frame = +2
Query: 113 DEERGKIAVETLKNEGLNPSYHQLDITNKKSVESFRDYIKTKY---EGIDILINNAAIAF 283
D E G A N +PS L I NK+ V S + GI+ L+ ++ I
Sbjct: 83 DSESGLTASVACCNCCRHPSEACLYILNKRKVMSQHGLVPPAMLVGNGIEKLLLHSNIKL 142
Query: 284 KQNA---TE---PVAVQAEQTLYVNFFSLTSTCEILFPIVKNGGRVINVSSSAGHL 433
+ TE ++ ++ LY N +L+S I V GR+ VSSS G L
Sbjct: 143 VPESHLITERSMKTQIKWKEILYQNPINLSSQDTIGVICVDKNGRIAVVSSSGGLL 198
>SPAC1039.06 |||alanine racemase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 415
Score = 25.4 bits (53), Expect = 5.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 395 GRVINVSSSAGHLSRIPSENLRNKLKDPKLTLPE 496
G VI + ++ R+ E+ K KDPK TLP+
Sbjct: 341 GIVITPGFESFYVDRLSQEHGILKSKDPKATLPD 374
>SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 625
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -1
Query: 227 CNPENFPRFSCLLYQVGGSSGLSLRFSKFPL-LFSHALRH 111
C P P+ S ++YQ GL + F+ L +H + H
Sbjct: 509 CKPGGKPQLSSMMYQRSADMGLGVPFNIASYSLLTHMIAH 548
>SPBC36.01c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 580
Score = 25.4 bits (53), Expect = 5.2
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 251 DILINNAAIAFKQNATEPVAVQAEQTLYVNF-FSLTSTCEILFPIVKNGGRVINVSSSA 424
DI++N I K ATEP+ +LY +F +++ +P++ GR + SA
Sbjct: 353 DIIMNYLLIPLKMLATEPIVFLV--SLYCSFVYAIIYLLLEAYPVIFQEGRHFPLGVSA 409
>SPBC18A7.02c |||seven transmembrane receptor-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = -2
Query: 199 LVCYIKLVVARV*AFVFQSFH--CYFPTLFVTRC 104
++C+ L V R A QS H +F F+T C
Sbjct: 288 IICFFALFVVRFFAITIQSIHLGLWFCFFFLTAC 321
>SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 997
Score = 25.0 bits (52), Expect = 6.8
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -3
Query: 399 LPPFLTMGNSISQVDVNEKKLTYKVCSA*TATGSVAFCLNAMAAL 265
+PP + + S+ VD+ + +LT++ S A G + F N +A +
Sbjct: 576 VPPLIVVDRSVIPVDICDIRLTFQSMS---AMGHLTFLDNRIAVV 617
>SPBP8B7.09c |||karyopherin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 978
Score = 25.0 bits (52), Expect = 6.8
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 357 QLVRYCSP*LKMVGGLLTCLVVPVTLAEFQVKT*GINSKTPN 482
Q+V Y L M+G LL V PVT + V T +NS N
Sbjct: 569 QVVNYTESSLAMLGDLLNISVSPVTDMDAPVPT--LNSSIRN 608
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -3
Query: 132 IFPRSSSRDVK*TVPLKRLQSPRTIAKPMPLLAPVTTATLVDIF 1
IFP S + D + +KRL+ P +KP + A L+ F
Sbjct: 594 IFPFSLNPDADLNLKIKRLKDPDAPSKPFVVNATTEMEMLLKCF 637
>SPBC2G2.09c |crs1|mug17|meiosis specific cyclin
Crs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 229
Score = 24.6 bits (51), Expect = 9.0
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +2
Query: 170 SYHQLDITNKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLYVNFFS 349
S H +++ SV S + K I I N IA+K+ + +V E+T V + S
Sbjct: 46 SSHLINLRRVPSVNSIIEQEKKGLTKISPSILNQNIAYKEKRQQLFSVLYEET--VGYVS 103
Query: 350 LTSTC 364
+ + C
Sbjct: 104 MDTLC 108
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 2 KMSTKVAVVTGANKGIGFAIVRGL 73
KM+ V +VTG + GIG +V L
Sbjct: 72 KMNGMVVMVTGGSSGIGQVVVEKL 95
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,148,283
Number of Sequences: 5004
Number of extensions: 45762
Number of successful extensions: 173
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -