Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS323H05f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098501-8|AAC67403.1| 459|Caenorhabditis elegans Hypothetical ... 127 5e-30
X01005-1|CAA25498.1| 273|Caenorhabditis elegans protein ( Caeno... 70 1e-12
U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical pr... 70 1e-12
AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical ... 70 1e-12
AF067947-2|AAC19229.2| 273|Caenorhabditis elegans Hypothetical ... 70 1e-12
AF067947-1|AAC19233.1| 273|Caenorhabditis elegans Hypothetical ... 70 1e-12
AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical ... 70 1e-12
U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical pr... 69 2e-12
U23174-5|AAC46711.1| 329|Caenorhabditis elegans Hypothetical pr... 59 2e-09
AF106576-3|AAK68401.1| 329|Caenorhabditis elegans Hypothetical ... 59 2e-09
AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormo... 58 3e-09
U49941-9|AAB53871.1| 141|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AC006747-1|AAF60509.1| 311|Caenorhabditis elegans Hypothetical ... 36 0.013
U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical pr... 34 0.054
AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical ... 34 0.054
AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical... 33 0.12
Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical pr... 28 3.5
AF038612-2|AAB92044.1| 507|Caenorhabditis elegans Hypothetical ... 28 4.7
>AF098501-8|AAC67403.1| 459|Caenorhabditis elegans Hypothetical
protein H28G03.4 protein.
Length = 459
Score = 127 bits (306), Expect = 5e-30
Identities = 54/100 (54%), Positives = 69/100 (69%)
Frame = -2
Query: 487 FNNRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQYLEEKA 308
F W FQQD APAH+ K+ Q W + DFI WP SSPDLNP+DY +W LE KA
Sbjct: 300 FKKTKWTFQQDGAPAHKHKNVQAWCESNFPDFIAFNQWPPSSPDLNPMDYSVWSVLEAKA 359
Query: 307 CSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRLKA 188
CSKPH N++SLK SL KA ++D++ +RA +D +PRRL+A
Sbjct: 360 CSKPHRNIDSLKDSLKKAWDELDINYLRATVDSFPRRLEA 399
Score = 30.3 bits (65), Expect = 0.87
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = -2
Query: 247 DIDMDLVRAAIDDWPRRLKACIQNHGGHFE 158
++++ +RA +D +P+R++ CI+ G FE
Sbjct: 419 ELEIPYLRATVDAFPKRVRVCIEADGDIFE 448
>X01005-1|CAA25498.1| 273|Caenorhabditis elegans protein (
Caenorhabditis eleganstransposable element Tc1. ).
Length = 273
Score = 69.7 bits (163), Expect = 1e-12
Identities = 36/103 (34%), Positives = 54/103 (52%)
Frame = -2
Query: 478 RHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQYLEEKACSK 299
R +VFQQD+ P H + + W R + + DWPS SPDLNP+++ +W+ LE +
Sbjct: 170 RGFVFQQDNDPKHTSLHVRSWFQRRHVHLL---DWPSQSPDLNPIEH-LWEELERRLGGI 225
Query: 298 PHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHG 170
N ++ L A I M ++ ID PRR +A I +G
Sbjct: 226 RASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVIDANG 268
>U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical
protein F18C5.7 protein.
Length = 343
Score = 69.7 bits (163), Expect = 1e-12
Identities = 36/103 (34%), Positives = 54/103 (52%)
Frame = -2
Query: 478 RHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQYLEEKACSK 299
R +VFQQD+ P H + + W R + + DWPS SPDLNP+++ +W+ LE +
Sbjct: 240 RGFVFQQDNDPKHTSLHVRSWFQRRRVHLL---DWPSQSPDLNPIEH-LWEELERRLGGI 295
Query: 298 PHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHG 170
N ++ L A I M ++ ID PRR +A I +G
Sbjct: 296 RASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVIDANG 338
>AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical
protein Y39F10A.4 protein.
Length = 343
Score = 69.7 bits (163), Expect = 1e-12
Identities = 36/103 (34%), Positives = 54/103 (52%)
Frame = -2
Query: 478 RHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQYLEEKACSK 299
R +VFQQD+ P H + + W R + + DWPS SPDLNP+++ +W+ LE +
Sbjct: 240 RGFVFQQDNDPKHTSLHVRSWFQRRHVHLL---DWPSQSPDLNPIEH-LWEKLERRLGGI 295
Query: 298 PHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHG 170
N ++ L A I M ++ ID PRR +A I +G
Sbjct: 296 RASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVIDANG 338
>AF067947-2|AAC19229.2| 273|Caenorhabditis elegans Hypothetical
protein T10B5.9 protein.
Length = 273
Score = 69.7 bits (163), Expect = 1e-12
Identities = 36/103 (34%), Positives = 54/103 (52%)
Frame = -2
Query: 478 RHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQYLEEKACSK 299
R +VFQQD+ P H + + W R + + DWPS SPDLNP+++ +W+ LE +
Sbjct: 170 RGFVFQQDNDPKHTSLHVRSWFQRRRVHLL---DWPSQSPDLNPIEH-LWEELERRLGGI 225
Query: 298 PHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHG 170
N ++ L A I M ++ ID PRR +A I +G
Sbjct: 226 RASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVIDANG 268
>AF067947-1|AAC19233.1| 273|Caenorhabditis elegans Hypothetical
protein T10B5.1 protein.
Length = 273
Score = 69.7 bits (163), Expect = 1e-12
Identities = 36/103 (34%), Positives = 54/103 (52%)
Frame = -2
Query: 478 RHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQYLEEKACSK 299
R +VFQQD+ P H + + W R + + DWPS SPDLNP+++ +W+ LE +
Sbjct: 170 RGFVFQQDNDPKHTSLHVRSWFQRRRVHLL---DWPSQSPDLNPIEH-LWEELERRLGGI 225
Query: 298 PHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHG 170
N ++ L A I M ++ ID PRR +A I +G
Sbjct: 226 RASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVIDANG 268
>AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical
protein T07D3.8 protein.
Length = 343
Score = 69.7 bits (163), Expect = 1e-12
Identities = 36/103 (34%), Positives = 54/103 (52%)
Frame = -2
Query: 478 RHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQYLEEKACSK 299
R +VFQQD+ P H + + W R + + DWPS SPDLNP+++ +W+ LE +
Sbjct: 240 RGFVFQQDNDPKHTSLHVRSWFQRRHVHLL---DWPSQSPDLNPIEH-LWEELERRLGGI 295
Query: 298 PHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHG 170
N ++ L A I M ++ ID PRR +A I +G
Sbjct: 296 RASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVIDANG 338
>U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical
protein R173.2 protein.
Length = 314
Score = 69.3 bits (162), Expect = 2e-12
Identities = 36/103 (34%), Positives = 54/103 (52%)
Frame = -2
Query: 478 RHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQYLEEKACSK 299
R +VFQQD+ P H + + W R + + DWPS SPDLNP+++ +W+ LE +
Sbjct: 211 RGFVFQQDNDPKHTSLHVRSWFQRRRVHLL---DWPSQSPDLNPIEH-LWEELERRLGGI 266
Query: 298 PHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHG 170
N ++ L A I M ++ ID PRR +A I +G
Sbjct: 267 RASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAFIDANG 309
>U23174-5|AAC46711.1| 329|Caenorhabditis elegans Hypothetical
protein R10H1.3 protein.
Length = 329
Score = 59.3 bits (137), Expect = 2e-09
Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = -2
Query: 487 FNNRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQYLEE-- 314
++ + + FQQD+A H + ST+D+ ++I+ + DWP+ SPDLNP++ +W L
Sbjct: 221 YSRKDFRFQQDNATIHVSNSTRDYFKLKKINLL---DWPARSPDLNPIE-NLWGILVRIV 276
Query: 313 KACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHG 170
A +K +P + SLK ++ A I + +++ + RL I+ G
Sbjct: 277 YAQNKTYPTVASLKQGILDAWKSIPDNQLKSLVRSMEDRLFEIIRTQG 324
>AF106576-3|AAK68401.1| 329|Caenorhabditis elegans Hypothetical
protein W07E6.6 protein.
Length = 329
Score = 59.3 bits (137), Expect = 2e-09
Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = -2
Query: 487 FNNRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQYLEE-- 314
++ + + FQQD+A H + ST+D+ ++I+ + DWP+ SPDLNP++ +W L
Sbjct: 221 YSRKDFRFQQDNATIHVSNSTRDYFKLKKINLL---DWPARSPDLNPIE-NLWGILVRIV 276
Query: 313 KACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHG 170
A +K +P + SLK ++ A I + +++ + RL I+ G
Sbjct: 277 YAQNKTYPTVASLKQGILDAWKSIPDNQLKSLVRSMEDRLFEIIRTQG 324
>AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 88, isoform b protein.
Length = 459
Score = 58.4 bits (135), Expect = 3e-09
Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = -2
Query: 487 FNNRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQYLEE-- 314
++ + + FQQD+A H + ST+D+ ++I+ + DWP+ SPDLNP++ +W L
Sbjct: 351 YSRKDFRFQQDNATIHVSNSTRDYFKLKKINLL---DWPARSPDLNPIE-NLWGILVRIV 406
Query: 313 KACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHG 170
A +K +P + SLK ++ A I + +++ + RL I+ G
Sbjct: 407 YAQNKTYPTVASLKQGILDAWKSIPDNQLKSLVRSMEDRLFENIRTQG 454
>U49941-9|AAB53871.1| 141|Caenorhabditis elegans Hypothetical
protein K10B3.2 protein.
Length = 141
Score = 56.0 bits (129), Expect = 2e-08
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Frame = -2
Query: 469 VFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQYLEE--KACSKP 296
+F QD+A H + ST+D+ ++I+ + DWP+ SPDLNP++ +W L A +K
Sbjct: 39 IFCQDNATIHVSNSTRDYFKLKKINLL---DWPARSPDLNPIE-NLWGILVRIVYAQNKT 94
Query: 295 HPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHG 170
+P + SLK ++ A I + +++ + RL I+ G
Sbjct: 95 YPTVASLKQGILDAWKSIPDNQLKSLVRSMEDRLFEIIRTQG 136
>AC006747-1|AAF60509.1| 311|Caenorhabditis elegans Hypothetical
protein Y39A3A.1 protein.
Length = 311
Score = 36.3 bits (80), Expect = 0.013
Identities = 25/96 (26%), Positives = 42/96 (43%)
Frame = -2
Query: 457 DSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQYLEEKACSKPHPNLES 278
D+A H A T+ L I+ + H P SPDL P DY +++ L+ + + ++
Sbjct: 214 DNARPHTALKTRQKLQTLGIEVLPH---PPYSPDLAPTDYHLFRSLQNHLAGQKFHDRKA 270
Query: 277 LKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHG 170
++T L A + I P R + I +G
Sbjct: 271 VETWLDDFFASKSQEFYAEGIAQLPLRWQEVIDTNG 306
>U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical
protein R05G6.2 protein.
Length = 339
Score = 34.3 bits (75), Expect = 0.054
Identities = 28/99 (28%), Positives = 39/99 (39%)
Frame = -2
Query: 466 FQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQYLEEKACSKPHPN 287
F D+A H AK T L + H P SPDL P DY ++ L + K +
Sbjct: 239 FLHDNARPHVAKKTFQKLQDLGWTVLPH---PPYSPDLAPTDYHLFLSLSDYMRDKQFDD 295
Query: 286 LESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHG 170
E LKT L + D I P + + + +G
Sbjct: 296 EEHLKTELSTFFSSRSPDFFSRGIMMLPSKWQQVVDTNG 334
>AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical
protein Y49F6A.4 protein.
Length = 514
Score = 34.3 bits (75), Expect = 0.054
Identities = 28/99 (28%), Positives = 39/99 (39%)
Frame = -2
Query: 466 FQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQYLEEKACSKPHPN 287
F D+A H AK T L + H P SPDL P DY ++ L + K +
Sbjct: 214 FLHDNARPHVAKKTFQKLQDLGWTVLPH---PPYSPDLAPTDYHLFLSLSDYMRDKQFDD 270
Query: 286 LESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHG 170
E LKT L + D I P + + + +G
Sbjct: 271 EEHLKTELSTFFSSRSPDFFSRGIMMLPSKWQQVVDTNG 309
>AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical
protein Y45G12C.13 protein.
Length = 384
Score = 33.1 bits (72), Expect = 0.12
Identities = 24/68 (35%), Positives = 30/68 (44%)
Frame = -2
Query: 466 FQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQYLEEKACSKPHPN 287
F D+A H AK T L + H P SPDL P DY ++ L + K +
Sbjct: 239 FLHDNARPHVAKKTFQKLQDLGWTVLPH---PPYSPDLAPTDYHLFLSLSDYMRDKQFDD 295
Query: 286 LESLKTSL 263
E LKT L
Sbjct: 296 EEHLKTEL 303
>Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical
protein T05F1.5 protein.
Length = 366
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = -3
Query: 516 TLWNLFLIPCS---ITGTGYSNKIRRQLIERRAHKTGWRRVKST 394
T W+ F + CS +T G+S+K +RQ + + + W ++ ++
Sbjct: 171 TPWSPFQLDCSCLTVTCDGFSSKFKRQRVGASSGRFSWFKINTS 214
>AF038612-2|AAB92044.1| 507|Caenorhabditis elegans Hypothetical
protein F13B6.2 protein.
Length = 507
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -2
Query: 286 LESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHGGHFE 158
+ SLK +L A ++D++ +RA +D P+ L G+F+
Sbjct: 1 MNSLKIALTAAWDNLDVNYLRAVVDSHPKGLWPLSNQKEGYFK 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,790,079
Number of Sequences: 27780
Number of extensions: 270892
Number of successful extensions: 645
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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