Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS323G06f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14968-1|AAA85656.1| 148|Homo sapiens ribosomal protein L27a pr... 175 8e-44
BC020169-1|AAH20169.1| 147|Homo sapiens Unknown (protein for IM... 175 8e-44
BC005326-1|AAH05326.1| 148|Homo sapiens ribosomal protein L27a ... 175 8e-44
AB020236-1|BAA77361.1| 148|Homo sapiens ribosomal protein L27A ... 175 8e-44
BC066326-1|AAH66326.1| 148|Homo sapiens ribosomal protein L27a ... 167 3e-41
AJ400879-2|CAC35388.1| 106|Homo sapiens ribosomal protein L27a ... 127 3e-29
AB007178-1|BAA25837.1| 34|Homo sapiens ribosomal protein L27a ... 44 3e-04
>U14968-1|AAA85656.1| 148|Homo sapiens ribosomal protein L27a
protein.
Length = 148
Score = 175 bits (426), Expect = 8e-44
Identities = 78/131 (59%), Positives = 95/131 (72%)
Frame = +2
Query: 11 KXTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXK 190
+ TRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM+++H +
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 65
Query: 191 NKNFCPXLNLDKLWTLVSEQTRLKYASAPDGKXPVINIVIAGYYXLLGKGKLPKQPVIAK 370
N++FCP +NLDKLWTLVSEQTR+ A G P+I++V +GYY +LGKGKLPKQPVI K
Sbjct: 66 NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVK 125
Query: 371 AKFFSKSAXEE 403
AKFFS+ A E+
Sbjct: 126 AKFFSRRAEEK 136
>BC020169-1|AAH20169.1| 147|Homo sapiens Unknown (protein for
IMAGE:3543815) protein.
Length = 147
Score = 175 bits (426), Expect = 8e-44
Identities = 78/131 (59%), Positives = 95/131 (72%)
Frame = +2
Query: 11 KXTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXK 190
+ TRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM+++H +
Sbjct: 5 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 64
Query: 191 NKNFCPXLNLDKLWTLVSEQTRLKYASAPDGKXPVINIVIAGYYXLLGKGKLPKQPVIAK 370
N++FCP +NLDKLWTLVSEQTR+ A G P+I++V +GYY +LGKGKLPKQPVI K
Sbjct: 65 NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVK 124
Query: 371 AKFFSKSAXEE 403
AKFFS+ A E+
Sbjct: 125 AKFFSRRAEEK 135
>BC005326-1|AAH05326.1| 148|Homo sapiens ribosomal protein L27a
protein.
Length = 148
Score = 175 bits (426), Expect = 8e-44
Identities = 78/131 (59%), Positives = 95/131 (72%)
Frame = +2
Query: 11 KXTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXK 190
+ TRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM+++H +
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 65
Query: 191 NKNFCPXLNLDKLWTLVSEQTRLKYASAPDGKXPVINIVIAGYYXLLGKGKLPKQPVIAK 370
N++FCP +NLDKLWTLVSEQTR+ A G P+I++V +GYY +LGKGKLPKQPVI K
Sbjct: 66 NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVK 125
Query: 371 AKFFSKSAXEE 403
AKFFS+ A E+
Sbjct: 126 AKFFSRRAEEK 136
>AB020236-1|BAA77361.1| 148|Homo sapiens ribosomal protein L27A
protein.
Length = 148
Score = 175 bits (426), Expect = 8e-44
Identities = 78/131 (59%), Positives = 95/131 (72%)
Frame = +2
Query: 11 KXTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXK 190
+ TRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM+++H +
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 65
Query: 191 NKNFCPXLNLDKLWTLVSEQTRLKYASAPDGKXPVINIVIAGYYXLLGKGKLPKQPVIAK 370
N++FCP +NLDKLWTLVSEQTR+ A G P+I++V +GYY +LGKGKLPKQPVI K
Sbjct: 66 NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVK 125
Query: 371 AKFFSKSAXEE 403
AKFFS+ A E+
Sbjct: 126 AKFFSRRAEEK 136
>BC066326-1|AAH66326.1| 148|Homo sapiens ribosomal protein L27a
protein.
Length = 148
Score = 167 bits (405), Expect = 3e-41
Identities = 75/131 (57%), Positives = 93/131 (70%)
Frame = +2
Query: 11 KXTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXK 190
+ TRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM++++ +
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYNLKR 65
Query: 191 NKNFCPXLNLDKLWTLVSEQTRLKYASAPDGKXPVINIVIAGYYXLLGKGKLPKQPVIAK 370
N++FCP +NLDKLWTLVSEQTR+ A G P+I++V +GYY +LGKGKL KQPVI K
Sbjct: 66 NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLAKQPVIVK 125
Query: 371 AKFFSKSAXEE 403
AK FS+ A E+
Sbjct: 126 AKLFSRRAEEK 136
>AJ400879-2|CAC35388.1| 106|Homo sapiens ribosomal protein L27a
protein.
Length = 106
Score = 127 bits (306), Expect = 3e-29
Identities = 55/99 (55%), Positives = 68/99 (68%)
Frame = +2
Query: 11 KXTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXK 190
+ TRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM+++H +
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 65
Query: 191 NKNFCPXLNLDKLWTLVSEQTRLKYASAPDGKXPVINIV 307
N++FCP +NLDKLWTLVSEQTR+ A G P+I++V
Sbjct: 66 NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVV 104
>AB007178-1|BAA25837.1| 34|Homo sapiens ribosomal protein L27a
protein.
Length = 34
Score = 44.0 bits (99), Expect = 3e-04
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +2
Query: 212 LNLDKLWTLVSEQTRLKYASAPDGKXPVINIV 307
+NLDKLWTLVSEQTR+ A G P+I++V
Sbjct: 1 VNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVV 32
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,153,188
Number of Sequences: 237096
Number of extensions: 996632
Number of successful extensions: 1346
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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