Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323G04f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1192 + 31611804-31612113,31612235-31614058,31614098-316148...    33   0.18 
02_01_0135 + 967172-967229,968316-968657,968936-969015,969063-96...    28   4.0  
02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-98...    27   6.9  

>04_04_1192 +
           31611804-31612113,31612235-31614058,31614098-31614842,
           31615047-31616835,31617136-31617163,31617343-31617794
          Length = 1715

 Score = 32.7 bits (71), Expect = 0.18
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = -3

Query: 357 CFSSCFNLFPIEHKWDNCRLI*IYASISFI 268
           CFS C +LFP EHK+D  +LI  + S SF+
Sbjct: 495 CFSYC-SLFPQEHKFDGEKLIFAWISQSFV 523


>02_01_0135 +
           967172-967229,968316-968657,968936-969015,969063-969698,
           969819-971527,971563-972514,972821-973273,974303-974497
          Length = 1474

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = -3

Query: 357 CFSSCFNLFPIEHKWDNCRLI*IYASISFI 268
           CFS C +LFP +HK++  +L+  + S +F+
Sbjct: 457 CFSYC-SLFPKDHKFNGKKLVRAWISQNFV 485


>02_01_0137 +
           988442-988641,989088-989281,989369-989488,989594-989673,
           990244-990510,990840-992458,992571-993327,993560-995506
          Length = 1727

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -3

Query: 360 WCFSSCFNLFPIEHKWDNCRLI*IYASISFI 268
           +CFS C +LFP +HK+   +L+  + S +F+
Sbjct: 670 YCFSYC-SLFPKDHKFCGKKLVRAWISQNFV 699


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,254,905
Number of Sequences: 37544
Number of extensions: 224988
Number of successful extensions: 373
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 373
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)