Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS323G01f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 32 0.060
SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyce... 31 0.10
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 30 0.24
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 29 0.32
SPBC30D10.17c |||glucan synthase regulator |Schizosaccharomyces ... 29 0.56
SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce... 28 0.97
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 28 0.97
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 28 0.97
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 27 1.3
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 27 1.3
SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr 1||... 27 1.3
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 27 1.3
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 1.7
SPCC663.15c |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.2
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 26 3.0
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 26 3.0
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 26 3.0
SPAC29E6.02 |prp3|SPAC30.06|U4/U6 x U5 tri-snRNP complex subunit... 26 3.0
SPBC8D2.16c |||DUF171 family protein|Schizosaccharomyces pombe|c... 26 3.9
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 26 3.9
SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces pom... 26 3.9
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 26 3.9
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 25 5.2
SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces pombe... 25 5.2
SPAC30D11.10 |rad22||DNA repair protein Rad22|Schizosaccharomyce... 25 5.2
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 25 5.2
SPAC18B11.03c |||N-acetyltransferase |Schizosaccharomyces pombe|... 25 5.2
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 25 5.2
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 25 6.8
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 25 6.8
SPMIT.04 |cox3||cytochrome c oxidase 3|Schizosaccharomyces pombe... 25 6.8
SPCC970.01 |rad16|rad10, rad20, swi9|DNA repair endonuclease XPF... 25 6.8
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 25 9.0
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 25 9.0
SPACUNK4.11c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 9.0
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 31.9 bits (69), Expect = 0.060
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = -3
Query: 411 KSKMLSRNLLGISVKKKINK--TEKGNNADKDEVEKSSVSTLEVCAERNVKNIECDEHKI 238
K++ S N S+ KK E GN D+ V+ N N++ +
Sbjct: 1345 KAERFSENAGVESIGKKGKNLLNESGNGKKLDKGLPPKVNGKSSVTRGNKTNLKARNGRN 1404
Query: 237 NDDSIEQLREMNIQNREKEKIQDKEIN 157
NDDS ++ ++ + +EKE I+D+E N
Sbjct: 1405 NDDSSNKIN-LSEKEKEKESIEDEEKN 1430
>SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 351
Score = 31.1 bits (67), Expect = 0.10
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 225 IEQLREMNIQNRE-KEKIQDKEINNRDCEHHTNLEGT-SEKLNDECLKGKDGNLNK 64
+E+L E ++ E KE Q E+ +R + H N EG+ SE ++D + G D + K
Sbjct: 69 LEELWEQSMMYEEQKELTQLGEMLDRLWDKHINSEGSKSETISDTAISGNDDTMEK 124
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 29.9 bits (64), Expect = 0.24
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Frame = -3
Query: 423 EQLKKSKMLSRNLLGISVKKKINKTEKGNNADKDEVEKSSV--STLEVCAERNVK----- 265
EQ K + +++ ++ + N+A+ + +SV E AE+++
Sbjct: 286 EQPKNTAEVAQGAASAKAPQQTTQQGTQNSANAEPSSSASVPAEAPETEAEQSIDVSSDI 345
Query: 264 NIECDEHKIND--DSIEQLREMNIQNREKEKIQDKEINNRDCEHHTNLEGT 118
+ D K N+ S E ++ +N K++ ++++ +D E H+NLE T
Sbjct: 346 GLRSDSSKPNEAPTSSENIKADQPENSTKQENPEEDMQIKDAEEHSNLEST 396
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7
domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1811
Score = 29.5 bits (63), Expect = 0.32
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Frame = -3
Query: 336 NADKDEVEKSSVSTLEVCAERNVKNIECDEHKINDDSIEQLREMNIQNREKE-KIQDKEI 160
+++ DEV+ SSV E +E +K+ DE +D EQ N EK +I DK +
Sbjct: 13 SSNPDEVKGSSVVEEEPDSESTIKSRVSDEIDEHDSIPEQ------SNTEKSIEINDKNL 66
Query: 159 N-NRDCEHHTNLEGTSEKLNDECLKGKD-GNLNK 64
+D E + +L + L+ ++ + G L+K
Sbjct: 67 EAEKDIESNLSLRPPEDDLDSRSIESEQTGTLSK 100
>SPBC30D10.17c |||glucan synthase regulator |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 504
Score = 28.7 bits (61), Expect = 0.56
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Frame = -3
Query: 453 ITSFGGLKKEEQLKKSKMLSRNLLGISVKKKINKTEKGNNADKDEVEKS---SVSTLE-V 286
I +G K EE +KK ++ + LG+ +IN + N D+ E S S +T+E V
Sbjct: 399 IPLYGPSKDEELIKKEELEADTDLGLINTSEIN--QPANLPDEPTAETSNPVSATTVEAV 456
Query: 285 CAERNVKNIECDEHKIND----DSIEQLREMNIQNREKE 181
+ K+ E ++H D +I + + Q EKE
Sbjct: 457 TTTADNKDEEKNDHVTEDVSQNSTIAEASSLQAQEEEKE 495
>SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1131
Score = 27.9 bits (59), Expect = 0.97
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -3
Query: 192 REKEKIQDKEINNRDCEHHT--NLEGTSEKLNDECLKGKDGNLNKISL 55
R+K Q KE N D H T NLEG + + + LKG + L+ +SL
Sbjct: 314 RKKSTFQ-KENANVDANHATENNLEGQATQKSVSILKGHNKALSNVSL 360
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 27.9 bits (59), Expect = 0.97
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = -3
Query: 432 KKEEQLKKSKMLSRNLLGISVKK--KINKTEKGNNA--DKDEVEKSSVSTLEVCAERNVK 265
KK KKSK + + KK KI K +K + DK+ K S E+ K
Sbjct: 169 KKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKEHKKKDKESSSKKRKSGSSDKEEKKKK 228
Query: 264 NIECDEHKINDDSIEQLREMN 202
I+ + + S+E+++E N
Sbjct: 229 KIKLKDKPESTSSVEKVKEGN 249
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 27.9 bits (59), Expect = 0.97
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Frame = -3
Query: 360 INKTEKGNNADKDEVEKSSVSTLEVCAERNVKNIECDEHKIND--DSIEQLREMNIQNRE 187
INK E GN + D V + E E N + + +E + D D E + +
Sbjct: 74 INKGEDGNENEVDNVNNNDKKEDEDNVEENEEEADANEEEEEDEEDDEEDEEDEDESGGG 133
Query: 186 KEKIQDKEINNRDCEHHTNLEGTSEKLNDE 97
+ K + N+ + ++ E+L DE
Sbjct: 134 RRKRARHDRRNQFLDIEAEVDEDEEELEDE 163
>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 568
Score = 27.5 bits (58), Expect = 1.3
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -3
Query: 330 DKDEVEKSSVSTLEVCAERNVKNIECDEHKINDDSIE-QLREMNIQNREKEKIQDKEIN 157
DK+ +KSS E ++ K IE D+ N I+ Q E + N KE Q + +N
Sbjct: 64 DKEANDKSSKGLEEESDSKDRKTIETDQPSNNIGDIKSQKSEKSNGNARKETKQSERVN 122
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 27.5 bits (58), Expect = 1.3
Identities = 19/102 (18%), Positives = 46/102 (45%), Gaps = 11/102 (10%)
Frame = -3
Query: 360 INKTEKGNNADKDEVEKSSVSTLEVCAERNVKNIECDEHKIN-----------DDSIEQL 214
+N +E+ + D E +++ + N KN + +E K + DDS +
Sbjct: 112 LNMSEEPKHHDSSNKESTNLDNSNMDESENQKNFKIEEPKPSGDFRNEGPKQCDDSKIEK 171
Query: 213 REMNIQNREKEKIQDKEINNRDCEHHTNLEGTSEKLNDECLK 88
E+++ ++ +E I + + + E+HT + + N + ++
Sbjct: 172 PELHVNSKIEEPIHRIDSEHNEPEYHTESKNEESEHNTKSIR 213
>SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 992
Score = 27.5 bits (58), Expect = 1.3
Identities = 19/82 (23%), Positives = 38/82 (46%)
Frame = -3
Query: 351 TEKGNNADKDEVEKSSVSTLEVCAERNVKNIECDEHKINDDSIEQLREMNIQNREKEKIQ 172
T + +N DE + +S+S + + ++ E + +N+DS Q E + + +
Sbjct: 494 TAEVSNVRNDESKANSLSEISYNQQSECRSSELN---VNEDSANQKEESALGTSDNSDMY 550
Query: 171 DKEINNRDCEHHTNLEGTSEKL 106
+KE N H+ +L S+ L
Sbjct: 551 EKE--NTPIHHNESLNQLSKDL 570
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 27.5 bits (58), Expect = 1.3
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = -3
Query: 429 KEEQLKKSKMLSRNLLGISVKKKINKTEKGNNADKDEVEKSSVSTLEVCAERNVKNIECD 250
+E + K++ + ++ I V K KT+ ADK E S + + + N + E
Sbjct: 485 EETESKEADVKAKETDSIEVDDKEEKTDSKETADKVEQTDSKDTNEKPAKDDNKEANEKA 544
Query: 249 EHKINDDSIEQLRE-MNIQNREKE 181
E + D E++ E ++QN KE
Sbjct: 545 EKVDSKDVKEKIEEAADLQNSGKE 568
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.1 bits (57), Expect = 1.7
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Frame = -3
Query: 465 SSGLITSFGGLKKEEQLKKSKMLSRNLLGISVKKKINKT-EKGNNADKD-EVEKSSVSTL 292
SS L ++E K + +S++ SVK K+++T K + + D E K+ VS +
Sbjct: 943 SSDLGKKLTARQEEISNLKEENMSQSQAITSVKSKLDETLSKSSKLEADIEHLKNKVSEV 1002
Query: 291 EVCAERNVKNIE--CDEHKINDDSIEQLR-EMNIQNREKEKIQDK 166
EV + + E D+ K N ++I L+ E+ + E + +Q K
Sbjct: 1003 EVERNALLASNERLMDDLKNNGENIASLQTEIEKKRAENDDLQSK 1047
>SPCC663.15c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 657
Score = 26.6 bits (56), Expect = 2.2
Identities = 15/72 (20%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Frame = -3
Query: 402 MLSRNLLGISVKKKINKTEKGNNADKDEVEKSSVSTLEV---CAERNVKNIECDE----H 244
+LS+ LLG + ++ NN ++D+ +++ S + ++++ N+ D+
Sbjct: 92 VLSKGLLGKATPLSEDRKPTSNNEEEDDADEAKSSNADSSTDSVQKSLANVNMDDANGPE 151
Query: 243 KINDDSIEQLRE 208
+++ S+++LRE
Sbjct: 152 RLHYPSVKRLRE 163
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 26.2 bits (55), Expect = 3.0
Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 18/132 (13%)
Frame = -3
Query: 432 KKEEQLK-KSKMLSRNLLGISVKKKINKTEKGNNADKDEVEKSSVSTLEVCAERNVKNIE 256
K+ E+LK K + RNLL +K+ K EK + + E+ + LE ++ N++ I+
Sbjct: 271 KEIEKLKEKEGSIRRNLLAFD--RKVRKQEKLIASKRPELISIAEKALE--SKSNLRKIQ 326
Query: 255 CDEHKINDDSIEQLREMNI-QNR----------------EKEKIQDKEINNRDCEHHTNL 127
+I D +Q + + +N+ EKE+++ + D E + L
Sbjct: 327 RKAAEIEKDYSDQASTLQVLENQLTSLSAAEKEFLKDMQEKEQLKGLRLLPEDKEEYEGL 386
Query: 126 EGTSEKLNDECL 91
++KLN L
Sbjct: 387 RSEADKLNSNLL 398
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 26.2 bits (55), Expect = 3.0
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = -3
Query: 327 KDEVEKSSVSTLEVCAERNVKNIECDEHKINDDSIEQLREMNIQNR 190
K E+ ++LE E ++ NIE D +++I L+EM+ QN+
Sbjct: 824 KSELFSEECASLEDVLE-SINNIEDDVGFSREEAIVALKEMDAQNK 868
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 3.0
Identities = 12/48 (25%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -3
Query: 432 KKEEQLKKSKMLSRNLLGISVKKK-INKTEKGNNADKDEVEKSSVSTL 292
K + ++ K+ S LLG KKK + +++K +++D D + + +
Sbjct: 479 KARRRAEREKLRSEGLLGKKSKKKLLRESQKPSSSDSDNASLTRIDKI 526
>SPAC29E6.02 |prp3|SPAC30.06|U4/U6 x U5 tri-snRNP complex subunit
Prp3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 542
Score = 26.2 bits (55), Expect = 3.0
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = -3
Query: 423 EQLKKSKMLSRNLLGISVKKKINK-TEKGNNADKDEVEKSSVSTLEVCAERNVKNIECDE 247
E++K+ ++ L + K +E GNNA + ++ E A+R NI E
Sbjct: 29 EEIKRRRLQLEQRLAQQAQVPWEKRSENGNNAGMETIQNRISELKEKTAKRFNANIPKSE 88
Query: 246 HKINDDS 226
DDS
Sbjct: 89 GLFRDDS 95
>SPBC8D2.16c |||DUF171 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 315
Score = 25.8 bits (54), Expect = 3.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 380 PSKFLLSILLFFNCSSFLRPPKLVINP 460
P+KFL +L +F F+R +NP
Sbjct: 81 PTKFLTDLLCYFETPFFMRKELFPLNP 107
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 25.8 bits (54), Expect = 3.9
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -3
Query: 174 QDKEINNRDCEHHTNLEGTSEKLNDECLKGK--DGNLNKIS 58
QD N+ E NL +SEK + KGK GN N++S
Sbjct: 33 QDSPQNDELAEKSENLAVSSEKTTSKKKKGKKNKGNKNQVS 73
>SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 409
Score = 25.8 bits (54), Expect = 3.9
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = -3
Query: 360 INKTEKGNNADKDEVEKSSVSTLEVCAERNVKNIECDEHKINDDSIEQLR-EMNIQ--NR 190
+ +N++ DEVE + ++ +RN N E + +D E + + N Q N
Sbjct: 324 VQAVSSSSNSEIDEVEDAETIDSKILEKRNDLNNEEPNSVVAEDGSEIITLDENDQSPNE 383
Query: 189 EKEKIQDKEI 160
EK++D ++
Sbjct: 384 ATEKLRDNDL 393
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/62 (19%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = -3
Query: 372 VKKKINKTEKGNNADKDEVEKSSVSTLEVCAERNVKNIECDEHKINDDS---IEQLREMN 202
+K + +TEK K+E+E ++ + + N+E + H++ D ++Q++ ++
Sbjct: 1489 LKSEKERTEKELADSKNELEHLQSEAVDADGKTEISNLEKEIHELRSDKEGLVQQVQNLS 1548
Query: 201 IQ 196
+
Sbjct: 1549 AE 1550
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 25.4 bits (53), Expect = 5.2
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 447 SFGGLKKEEQLKKSKMLS-RNLLGISVKKKINKTEKGNNADKDEVEKSSVSTLE 289
+FG K+ ++ +L +NL S KI E N+ DK + ++TLE
Sbjct: 1101 AFGTSKQNLHFRQHDVLGMKNLFNFSCSNKIKGEEVLNDGDKGKRRTVLLATLE 1154
>SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 652
Score = 25.4 bits (53), Expect = 5.2
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Frame = -3
Query: 360 INKTEKGNNADKDEVEKSSVSTL---EVCAERNVKNIEC-DEHKINDDSIEQLR-EMNIQ 196
+NK +K KD+ EKSS +V N +E DE++ +D E ++ +N++
Sbjct: 27 MNKNKKRKPEKKDDKEKSSKKVQKKNKVIESLNEMEVEMEDENENENDEQEAIQYYINVE 86
Query: 195 NREKEKI--QDKEINNRDCEHHTNLEGTSEKLNDECLKGKDGNLNK 64
+++ ++ Q+ + ++ D H SE + + +G L K
Sbjct: 87 SQDADETLHQEAQDSSEDPFHQHFDYDDSEVIKNSIAAYDEGKLCK 132
>SPAC30D11.10 |rad22||DNA repair protein Rad22|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 469
Score = 25.4 bits (53), Expect = 5.2
Identities = 20/100 (20%), Positives = 42/100 (42%)
Frame = -3
Query: 429 KEEQLKKSKMLSRNLLGISVKKKINKTEKGNNADKDEVEKSSVSTLEVCAERNVKNIECD 250
+E +KK K L+ ++ + +NK E+ E+ +E+ A+ + NI +
Sbjct: 191 RESFIKKQKTLNSTRT-VNNQPLVNKGEQLAPRRAAELNDEQTREIEMYADEELDNIFVE 249
Query: 249 EHKINDDSIEQLREMNIQNREKEKIQDKEINNRDCEHHTN 130
+ I ++ + N + +INN+D H +
Sbjct: 250 DDIIAHLAVAEDTAHPAANNHHSEKAGTQINNKDKGSHNS 289
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 25.4 bits (53), Expect = 5.2
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -3
Query: 249 EHKINDDSIEQLREMNIQNREKEKIQDKEINNR 151
E +ND E+ R+ +QN+ +++ I NR
Sbjct: 265 EEYLNDPDFEENRKQYLQNKSGSPVEETAILNR 297
>SPAC18B11.03c |||N-acetyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 440
Score = 25.4 bits (53), Expect = 5.2
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 248 SSHSIFFTFLSA--HTSKVLTLDFSTSSLSALLPFSVLLIFFFTEIPSKFLLSILLFFNC 421
SSH+IFF+ +A K L+ + S S +L I++ K L +L+ N
Sbjct: 211 SSHTIFFSISNAVVKNIKQLSKNIDASFTSIFYSVFMLSIYYAIAKNGKVNLDMLIDVNA 270
Query: 422 SSFL 433
FL
Sbjct: 271 RRFL 274
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 25.4 bits (53), Expect = 5.2
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -3
Query: 276 RNVKNIECDEHKINDDSIEQLREMNIQNREKEKIQDKEINNRDCEHHTNLEGTSE-KLND 100
RN+ E DE + ++ + L E+N + R + +Q K I + + TS+ L+
Sbjct: 1402 RNILKNEDDEIRFDEVGMWLLGEINERKRNESMLQSKRILDSAQQDVAKFVDTSQSNLDV 1461
Query: 99 ECLKGKDGNLNK 64
+ + KD N K
Sbjct: 1462 QLISLKDVNDRK 1473
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 3 LFNHQRQIHLRWNCNQLPKIFCLNSHLFLSNIHHLTFHWSLLNLCD 140
LF H + W +Q P LN H +++ L WS++ L D
Sbjct: 332 LFRHTPGLPEIWVSSQFPNSTVLNEHGYVTYNGWLA-QWSMITLFD 376
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 25.0 bits (52), Expect = 6.8
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = -3
Query: 435 LKKEEQLKKSKMLSRNLLGISVKKKINKTEKGNNADKDEVEKSSVSTLEVCAERNVKNIE 256
+++EE+ K + +N KK K N D + +S E +E + K+ +
Sbjct: 98 VEEEEEEDSEKPVRKN------KKSSKKASPKNAFDALADDMDDLSLDEEESESSEKSKK 151
Query: 255 CDEH-KINDDSIEQLREMNIQNREKEKIQDKEINNRD 148
+ K DD E L + +I++ EK+K + K+ D
Sbjct: 152 KKKKSKSKDDGSEALDDGDIESSEKDKKKKKKSKEND 188
>SPMIT.04 |cox3||cytochrome c oxidase 3|Schizosaccharomyces
pombe|chr mitochondrial|||Manual
Length = 273
Score = 25.0 bits (52), Expect = 6.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 380 PSKFLLSILLFFNC 421
P F LS++LFFNC
Sbjct: 23 PWPFFLSVVLFFNC 36
>SPCC970.01 |rad16|rad10, rad20, swi9|DNA repair endonuclease
XPF|Schizosaccharomyces pombe|chr 3|||Manual
Length = 892
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 386 KFLLSILLFFNCSSFLR 436
KFLLS L+ ++C SFL+
Sbjct: 286 KFLLSALVCYDCVSFLK 302
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 236 FILCSSHSIFFTFLSAHTSKVLTLD 310
F C+ + TFL AH SK LTL+
Sbjct: 437 FASCNLCASIVTFLFAHESKGLTLE 461
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 24.6 bits (51), Expect = 9.0
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = -3
Query: 369 KKKINKTEKGNNADKDEVEKSSVSTLEVCAERNVKNIECDEHKINDDSIEQLREMNIQNR 190
+K I + E+ + K+EVEK + ++ N K E DE + ++ L E N N+
Sbjct: 584 EKTIRENEESISLFKEEVEKLTDEITQLSERYNDKCHEFDELQ---KRLQTLEEEN--NK 638
Query: 189 EKEKIQDKEINNRDCEHHTNLEGTS-EKLNDE 97
KE K N + T E S K N+E
Sbjct: 639 AKEDSTSKTSNLLEQLKMTEAEVDSLRKENEE 670
>SPACUNK4.11c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 188
Score = 24.6 bits (51), Expect = 9.0
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -3
Query: 267 KNIECDEHKINDDSIEQLREMNIQNREKEKIQDKEINNRDCEHHTN 130
KNI DEH ++ L + +N E E I D E H+N
Sbjct: 28 KNIVTDEHWSLAGKVDFLPQKMTRNVEYESGYGGLIEENDLESHSN 73
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,672,954
Number of Sequences: 5004
Number of extensions: 28251
Number of successful extensions: 163
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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