Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS323G01f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    28   0.051
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    27   0.088
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   3.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   5.8  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   7.7  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 28.3 bits (60), Expect = 0.051
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -3

Query: 273 NVKNIECDEHKINDDSIEQLREMNIQNREKEKIQDKEINNR 151
           NVK +  + H +N++  + ++  N QN   +K   K  NN+
Sbjct: 404 NVKELIRNTHCVNNNQNDNIQNTNNQNDNNQKNNKKNANNQ 444


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 27.5 bits (58), Expect = 0.088
 Identities = 23/92 (25%), Positives = 43/92 (46%)
 Frame = -3

Query: 492 ILNSPALPSSSGLITSFGGLKKEEQLKKSKMLSRNLLGISVKKKINKTEKGNNADKDEVE 313
           ++N+    S  G +  F G K++E+        +  L I + K     + G N  + +  
Sbjct: 488 VINNRNNTSMKGTVRIFIGPKEDERGLPFTFREQKNLMIELDKFPITLQPGKNTIEQKST 547

Query: 312 KSSVSTLEVCAERNVKNIECDEHKINDDSIEQ 217
           KSSV+   +  ER  +N++ +   I  DS+E+
Sbjct: 548 KSSVT---IPFERTFRNLD-ENRPIGGDSLER 575


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 290 SKVLTLDFSTSSLSALLPFSV 352
           SKV TLD S + ++ L P SV
Sbjct: 595 SKVKTLDASHNRITELSPLSV 615


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = -3

Query: 234 DDSIEQLREMNIQNREKEKIQDKEINNRDCEHHTNLEGTSEKLND 100
           DD I+ L ++  ++     I DKEI     E   ++   +E + +
Sbjct: 345 DDGIDILDDVKCEDERVISIPDKEITVPSNEETIDINNGAELMQE 389


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -3

Query: 144 EHHTNLEGTSEKLNDECLKGKDGNL 70
           E   N+EGTS  LND   K  D  L
Sbjct: 656 EFPANIEGTSYFLNDYKHKDVDVTL 680


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,835
Number of Sequences: 438
Number of extensions: 2006
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)