Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS323F11f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 131 7e-32
SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase |Sc... 75 9e-15
SPBC19F5.03 |||inositol polyphosphate phosphatase |Schizosacchar... 73 3e-14
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 66 4e-12
SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosa... 32 0.045
SPBP4H10.16c |||phosphatase activator |Schizosaccharomyces pombe... 28 0.97
SPBC12C2.07c |||spermidine synthase |Schizosaccharomyces pombe|c... 27 1.3
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 27 1.7
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 26 3.9
SPBC14C8.02 |tim44||TIM23 translocase complex subunit Tim44|Schi... 25 6.8
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 25 9.0
SPAC23D3.04c |gpd2||glycerol-3-phosphate dehydrogenase Gpd2|Schi... 25 9.0
>SPAC1093.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 131 bits (316), Expect = 7e-32
Identities = 66/137 (48%), Positives = 85/137 (62%), Gaps = 7/137 (5%)
Frame = -2
Query: 391 FIEQSNLNIFGRAVYLTLIARRSNRYAGTRFLKRGANMHGDVANEVETEQIVHDSMVSSF 212
F++Q+ L+++G+ + +TLIARRS +AG RFL+RG G VANEVETEQIV D SSF
Sbjct: 211 FVDQAKLSVYGKPIIVTLIARRSRHFAGARFLRRGIRDDGYVANEVETEQIVFDGSASSF 270
Query: 211 AAGR-------FSSFVQMRGSIPSYWSQDISKMVPKPAISIDLGDPFAEIPGKHLNNLMR 53
++S+VQ RGSIP WSQ+ S + PKP I ID DPF H + L
Sbjct: 271 PISSTTPGIPCYTSYVQHRGSIPLRWSQEFSNITPKPPIGIDFHDPFYASTALHFDRLFG 330
Query: 52 RYGSPIMFLNLVKKKKK 2
YG P + LNLVK +K
Sbjct: 331 HYGIPCIVLNLVKSSEK 347
>SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 74.5 bits (175), Expect = 9e-15
Identities = 40/113 (35%), Positives = 60/113 (53%)
Frame = -2
Query: 346 LTLIARRSNRYAGTRFLKRGANMHGDVANEVETEQIVHDSMVSSFAAGRFSSFVQMRGSI 167
L +I R S YAGTR+ RG N G AN E EQI+ + SF Q+RGSI
Sbjct: 203 LCVITRHSPDYAGTRYFTRGVNAQGSAANFNEIEQIIMIESPITLEEQMVLSFTQIRGSI 262
Query: 166 PSYWSQDISKMVPKPAISIDLGDPFAEIPGKHLNNLMRRYGSPIMFLNLVKKK 8
P +W+ +++ + +P +S+ D + GKH L YG ++ +NL+ +K
Sbjct: 263 PMFWA-EVNDLHYRPLLSLQPLDYSETVFGKHFQELANDYGDNLVVVNLLDQK 314
>SPBC19F5.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 72.5 bits (170), Expect = 3e-14
Identities = 45/128 (35%), Positives = 73/128 (57%)
Frame = -2
Query: 391 FIEQSNLNIFGRAVYLTLIARRSNRYAGTRFLKRGANMHGDVANEVETEQIVHDSMVSSF 212
FI ++ + GR + L LI+RRS + AGTR+ RG + +G+ AN ETEQI ++VS
Sbjct: 178 FITSASTIVKGRTITLALISRRSKQRAGTRYFTRGLDENGNPANFNETEQI---TIVSDE 234
Query: 211 AAGRFSSFVQMRGSIPSYWSQDISKMVPKPAISIDLGDPFAEIPGKHLNNLMRRYGSPIM 32
+ S VQ RGS+P++W+ +++ + KP + + A KH + + YG ++
Sbjct: 235 KSEVTYSHVQTRGSVPAFWA-EVNNLRYKPLMVANSASMAAAAAKKHFDEQISIYGDQVV 293
Query: 31 FLNLVKKK 8
+NLV K
Sbjct: 294 -VNLVNCK 300
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 65.7 bits (153), Expect = 4e-12
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Frame = -2
Query: 385 EQSNLNIFGRAVYLTLIARRSNRYAGTRFLKRGANMHGDVANEVETEQIVHDSMVSSFAA 206
EQ L I + + L+LI+R S+ AGTRFL RG + G+VAN VETE I+ DS S +
Sbjct: 227 EQFKLGI--QTIRLSLISRLSSLRAGTRFLSRGVDDDGNVANFVETETIL-DS--SKYCV 281
Query: 205 GRFSSFVQMRGSIPSYWSQD-ISKMVPKPAISIDLGDPFAEIPGKHLNNLMRRYGSPIMF 29
S+ Q+RGSIP +W Q+ + K I+ L A KH +L+ YG P+
Sbjct: 282 ----SYCQVRGSIPIFWEQEGVQMFGQKIDITRSLEATRAAFE-KHFTSLIEEYG-PVHI 335
Query: 28 LNLV 17
+NL+
Sbjct: 336 INLL 339
>SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 889
Score = 32.3 bits (70), Expect = 0.045
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = -2
Query: 193 SFVQMRGSIPSYWSQDISKMVPKPAIS-IDLGDPFAEIPGKHLNNLMRRYGSPIMFLNLV 17
SFVQ+RG++P +W + S P+IS + + H + L + YG I ++L+
Sbjct: 293 SFVQVRGTVPCFWEEQFSSWY-GPSISFLRSSQASQSLFNFHFSKLYKAYGD-IYVIDLL 350
Query: 16 KKK 8
+ K
Sbjct: 351 QTK 353
>SPBP4H10.16c |||phosphatase activator |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 295
Score = 27.9 bits (59), Expect = 0.97
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = +3
Query: 78 PGISANGSPRSIDIAGLGTIFEMSCDQ*LGIEPLICTNELNLPAAKDDTIESCTICSVST 257
P + G P I + T+FE+S DQ LG+ I D I+ C +
Sbjct: 17 PDFNYEGDPIIIQLCDRDTVFELSRDQLLGLPESILMCLFPRGLLLDYEIQECQLTQRPL 76
Query: 258 SFATS 272
F T+
Sbjct: 77 IFQTA 81
>SPBC12C2.07c |||spermidine synthase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 298
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -2
Query: 172 SIPSYWSQDISKMVPKPAISIDLGDPFAEIPGKHLNNLMRRYGSPI 35
+IP+Y S I +V SIDL P + + N L + Y S I
Sbjct: 232 TIPTYPSGSIGFVVASKDASIDLSKPLRKWSPEEENKLCKYYNSEI 277
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 27.1 bits (57), Expect = 1.7
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -2
Query: 517 KKSKARIRSAQCTGVEVCLXQSPAISSPLTS--ASRLDIVHCSWFIEQSNLNIFGRAVYL 344
K+ R++ QC + L + P S + LD+++ S+F ++ LN FG+ L
Sbjct: 286 KRLDLRLQLIQCLAISYPLWSNSETWDPHRSIRSFNLDLLNSSFFSLKNFLNFFGKRSSL 345
Query: 343 TL 338
+L
Sbjct: 346 SL 347
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -2
Query: 262 NEVETEQIVHDSMVSSFAAGRFSSFVQMRGSIPSYWSQDISKMVPKPAISIDL 104
N E ++I DS+ + A + +S + GS P Y +++ + I+IDL
Sbjct: 583 NLAEPDEIADDSIHLHYDAAQENSPQPVNGSSPPYELVFVTRNTEEATITIDL 635
>SPBC14C8.02 |tim44||TIM23 translocase complex subunit
Tim44|Schizosaccharomyces pombe|chr 2|||Manual
Length = 427
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 201 LPAAKDDTIESCTICSVST 257
L A KDD I+ CT SV T
Sbjct: 381 LVAGKDDRIQQCTYASVFT 399
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 105 RSIDIAGLGTIFEMSCDQ*LGIEPLICTNELNLP 206
+S +I+G GT+ D+ I PL+C NLP
Sbjct: 707 KSQEISGCGTLHVNKSDEIRSICPLLC-ERANLP 739
>SPAC23D3.04c |gpd2||glycerol-3-phosphate dehydrogenase
Gpd2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 373
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +3
Query: 45 PYLRIKLFKCFPGISANGSPRSIDIAGLGTI 137
PY R+ + + PG++ G+ ++I G I
Sbjct: 216 PYFRVNIVEDVPGVALGGALKNIVAVAAGII 246
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,167,186
Number of Sequences: 5004
Number of extensions: 41236
Number of successful extensions: 127
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 122
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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